LOC120568522


Basic Information

Item Value
gene id LOC120568522
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 3564546 ~ 3585526 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU150928
CAGAAAGATGATTTCTCAGCTGTGAATAAACAGAACGGCTGGGAGTTGCAGATCCAGAAAGTTAAACTCGATCATTCAGCCACCTACTACTGCTCCTGTTATAAAGATGATCCccacagtgagaaatgctcCCTGCAGCCTGAACAAAAACCTCCAGATGAACAGATGTCAAACAGTGTTTGTGACAGGAAGAGATCAGTAAACCACAGCCCAGGTTCACATATTTCACCTCCATCTCAGCCAGAGTCACTAACAGTGTTGGGCAGTAACACATTACTAAGTAATCTATTACTGTTATATTATTAGGATACTTTCCCCAGTAAGGAGTAGTGTAAGGGATTACAATTTCCAAAACAGTAATTATATTAGTTATTAATCCAGTTAGAAAGTAATATAGTAATATAACAAGTACAATAACTAATTAGTTTTGATATGTAATATGTaaggtaatattttttttaagcagtaATAACTAACAAGTAACTGATTCCACTTCCTGAGTAAGTTGTCTAACACTGGtcacaaacacactgaactgagctgaagtttcttttcttaacaacacagagaaacaataataaaagatctgaaactgaaaactattcaaataattacattaataatacaatgtaacatacaaaacatacaaatgtatgtacatgtgttaTGACCCTGAGGTCatattttgtaatttgtttGGCCCTGCACTATCAGTTGTTCTCCTGAGGGTAGACAGGTAACGAAGAACAGGTGTGACCACCGGATTGGTCCAGCAGAGCTGATAGCTGTCTCCTGATTGGTCGCCGGGAGGACAGCAGCCATCTTAAGCCTCATCAGACAGGACCTGTGCCCCTCTCTTCGCTCTGCCATTCCCAACATGTGCCTGTGTAACCTGAGTCTTGTGGTCCAAGTGGTTGTGAGTTGTGTTAACAGCCTTCAGTTTTGAGTTCTTTGATTTGTTATCCTTCAGCCACTTTGTGTTAGTTGTGAAGACATTTTTCAATGTCTTATGTTGCTAGTAGCAGTCTGGTAGGAGTGAGAAgtcctttttttattcttctcctGTTTTGTGATCAGAAGCTTAGGTTagagctttttcttttctttacttgTTTTGG
>XM_039816095.1
GGCCTGTTGTCAGACAGCAGCCTTATCTGTCTGCTGCAGGGGCTGATGGGAGATGTGAGGAGCTGTTAGAAACCACGTGGCCCTCGTCTGATCTCACAGTTCGTCCTTGTTTGGCCTCAGCTGCATCAGAGCGCCACTTCTCCCCAGGTTCACCAGAGGAAACACCACTGAACTAAATGCTTttcctcccagctgctgctctgtgctgtctgtgttcAGCGCTGGCTGCCATGGCAACACAGCTGATTCAGGATGATTTAACATTGACCAGGAGAGTTGGTGGATACGTCTCCTTCAACTGTCGAGGCACTGAGCAGTGTGACCTACCTTATGTATTCTGGTACCAGAAGAAAGACACAGAAACATTCACAAGGATTCTGTATATTAGGAGGGATAATGGTGTCATAGAGAAGGAGAGATACAATCATCCTCAGAAAGATGATTTCTCAGCTGTGAATGAAGAGGACGGCTGTGAGTTGCAGATCCAGAAGGTTAAACTCGATCATTCAGCCACCTACTACTGCTCCTGTTATAAAGATGATCCccacagtgagaaatgctcCCTGCAGCCTGAACAAAAACCTCCAGATGAACAGATGTCAAACAGTGTTTGTGACAGGAAGAGATCAGTAAACCACAGCCCAGGTTCACATATTTCACCTCCATCTCAGCCAGAGTCACTAACAGTGTTGGGCAGTAACACATTACTAAGTAATCTATTACTGTTATATGTGGGAGAAAAGGACCACTTCACTGCAGAGTCTGGGATTCAGCTCCACCAGGGTACAGGAGATCCAGTCAGCAGCAACACCGAGGGAGAAGAAGATCAGCAAGCCAGGCCGCTGCAGCACACGGCCGGTCCATCCGTCCAGAGCATTGTCCCCCTCAGGTTTTTGTATCACTCAGTTTCACTGTGGGAGACCAGTTGGTGGTACTACATCTTTGGCTCTGGAACTAAACTGATTGTATCAGATGAGCCGGTAGTGAAGCCCGTGGTGAGCGTGTACCCAGCAGCATCCAGAGCCCACCTGGAGGGGAAGAGCTCCCTGCTGTGTCTGGCCTCAGCTATGTTTCCTCCTCTGGTCCAGTTCTCCTGGAAAAGACGTAATGAGACTGGTCCTCTGGAGGAGCTGTCCTCTGATGATATAGAGCAGCTGGAGATCAGAGAGTCAGGACACACCGCCTCCATCTTGCTGATCCATCAGAAAGAGAACAGCACATATAAATACCGCTGTGACGTCCTACATGAGGGGGGGACAGTGGAGGCCCAAACAGAACAAGaGGTTCCAGCTCCAGCAGCCTCCTGTCCTCCAGAGAGAGATCCACCAGACCAGCTAGCTCTGGAGGAAGCTGACTTGTCCTTCCAGTCCCAGTGCAGGGTGAAGTTGTTCTGTCTGCTGTACACCCAGCTGATAGTGAAGAGTCTGGTGTACTGCTGTGGACTCTCTCTGCTGATGATCCTCAGAAACAAGGGACCGTCCACCAGCTGCTCACATGCTGACTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU150928 False 1118 lncRNA 0.38 2 3574579 3585526
XM_039816095.1 True 1505 mRNA 0.51 7 3564546 3576221

Neighbor

gene id symbol gene type direction distance location
LOC120568006 NA coding downstream 310177 3234368 ~ 3254369 (-)
LOC120568004 NA coding downstream 363693 3183582 ~ 3200853 (-)
LOC120568011 NA coding downstream 383241 3158202 ~ 3181305 (-)
LOC120568007 NA coding downstream 674807 2867255 ~ 2889739 (-)
LOC120568323 NA coding upstream 86024 3671550 ~ 3706170 (-)
LOC120568526 NA coding upstream 161771 3747297 ~ 3751140 (-)
LOC120568321 NA coding upstream 163931 3749457 ~ 3760667 (-)
LOC120568324 NA coding upstream 275803 3861329 ~ 3871815 (-)
LOC120568530 NA coding upstream 298230 3883756 ~ 3889916 (-)
LOC120568338 NA non-coding downstream 16742 3544653 ~ 3547804 (-)
G111938 NA non-coding downstream 45028 3499035 ~ 3519518 (-)
G111750 NA non-coding downstream 70277 3494028 ~ 3494269 (-)
G111745 NA non-coding downstream 77344 3486856 ~ 3487202 (-)
G111740 NA non-coding downstream 125431 3437912 ~ 3439115 (-)
LOC120568334 NA non-coding upstream 29653 3615179 ~ 3618414 (-)
G111946 NA non-coding upstream 74250 3659776 ~ 3724882 (-)
G111960 NA non-coding upstream 89971 3675497 ~ 3701800 (-)
G111961 LOC102295145 non-coding upstream 97778 3683304 ~ 3683612 (-)
LOC120568339 NA non-coding upstream 105618 3691144 ~ 3692463 (-)
LOC120569104 NA other downstream 108012 3445400 ~ 3456534 (-)
LOC120568520 LOC101465856,LOC102211951,LOC102296991,LOC100703857,LOC103352978,LOC102799200 other downstream 192771 3314646 ~ 3371775 (-)
LOC120568005 NA other downstream 335399 3204287 ~ 3229147 (-)
LOC120568519 dlg1,LOC106568684,LOC105023059 other downstream 422092 2898215 ~ 3142454 (-)
G111573 NA other downstream 986532 2573304 ~ 2578014 (-)
LOC120568325 NA other upstream 44039 3629565 ~ 3633399 (-)
G112043 NA other upstream 652576 4238102 ~ 4238670 (-)
G112046 NA other upstream 682012 4267538 ~ 4284083 (-)
G112233 NA other upstream 2078478 5664004 ~ 5668687 (-)
LOC120568546 NA other upstream 2138207 5723733 ~ 5746081 (-)

Expression


Co-expression Network