G112069


Basic Information

Item Value
gene id G112069
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 4429027 ~ 4480919 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU151092
GTTTATAACAGTTTTAATGGACGATAAACATTCATTTGTAActtcacacaaaaacattttcactgACACTGGAAAATATCTGACAATATGcaaaacactgtaaaaatttAATCTCAAAACGCGCCGCCATCAACCAGCCCAAAAAAGGGCGACTAACTCATCATCCAAACGTTGCAAAATTTTGAGAATTTAGTGATTTAAACACAGTGATGAACACTGGAAGGAAAGCATTCTGTCACATTGATTCATTCATCAGACCAATAATCTTCTTTAGCGTCTAaacttcagataaaaaaaatctagTTTTGCGCAGCGTTTGGTGTTaaatttttacagttttcagacTTTTATAATATGAGTAcacatgtaatatatatatatatatatatatatatatatatgatgagtACATTACAGTGGAATAAAAACAACAGATTTAATAAGTGCCGTCACAAGCAGAGTATCACATTTCCATCTTTGGAAACAAGTGCAGTCAATGgaaaagaatatatatacatatatgtgtatatatatgtacattacATCACAAACAAGAGCTTATCTAAAGGTTTGATTCATATTAAAGGTGTTTTTGTCACAGACACGTTCAGTCTTGTGCAGGAAATTCTATATTTTACAAATTACGTAcatataaaagaagaaaaagacactTTAACATCGATCATTTAAAGCTGCATCAGCGCGTTATTGGCCACCAGGGGGCAGAAGAACTGACATCTTATTTAAACGTCTCATTGGAAGTTGTGTATTTGTTCACCCGGAGCACGTTCAAGTCCCGACACGACGTAGCAAAAACGTTTATTtaaacatctaaaaaaaatctgccaaaactgttgaaaaaaagagacaaaaacgtggtaaaaagtgttgattttggaGGACGATAAGTGACAACACAAGCGCAAAACTGAAACGGGTCTGCGTTGAACACCCTGCTGCCTtgtaatgctgcgttccagacacaatttttagcccgtaagttacgacttcaagtcccgacttggtagcgttccaggcaaagtcacgacaaGCTAGCTAAAACATTGTGCCGTTGGCAGGGTTCAGGTTAGGCTACCTACCGTTGACGTTAcctagcgctagctgatactagcgatttctagtcggcgacatattttgggcttcctttaataaacataacctgtagtagtacacagtCGTGTGTGTAtcgttttgattacaatgtgtttttttacaatttatgtctatttatttctatttctcaccgttcCAGGATCACTTTCAccggtagaaggttgtgaaaacacaagTTACGGGTTGCCTAGAACGCACCATTAATACCACCAAGGTTTACATACACGCCgctgctgattggctaacaTCTCCGACACAGccacaaaaaaaacctgaaaaaaaaaaaatacaccgtCTGGAGGAAACATGGCGTTTAACCCGAAAACGAGACTGAACGTGCCTCTTATGAATCCAATATTCACTTtccttttagctctgctttggtctccaccaaatCCTGAGAAAACACATCTTCTATATTATATTTCTTTAGCCATGAAACCAAAACTAGAAGCTTGAAAAAAAGCTTCTCAGAGCTGCAGAGTTCAGCATCTTTCACataatttgatccattgttcGTATACAAATATATTgataagtgcagctttaaattctAAGTCATGCAGAgctgtgttaaaaaatattAGTAATATAGATAAATTCCTATTCATTGATGAAGTTTTATCATTTCCTGAATCGTCACATTTCCAAACATTTGGCACTTTGAGTGAATACAAACAGACGATTCAGAAATATACATAATAACTTTACGTAAAGCacacgttaaaaaaaaagagacatgtGACTCTTAAAAGGGCCGGTCTGTGTCTTAAAGGGCCGGTCTGTGACTCTTAAAGGGCCAGTCACACCAGAATTGTAAAAGGGcgaaatgttattaatttgtctAATTCTTTgctacatttaaataaacatatgATCCCGCTAGCATGTCAGCGGCTAGCTTGGCAGTTACAGTAACGTTATTAGCCCTAAGACACACATTAATCTTGCTGAGTCATTGTCTGGTGTGACTGGATGTTAACCCTTCATGTTACACATCTGATGCCACGTTTACGTCATATACGATGGACGGTTCGCGATGGAAAAGCTTCCCGTGTTCATTACGACTTGTGTTCACGCTAACAagttttgctaaaaactacatcCATTAAATTTGGGTTTAATTACCTCAGAAGACAGACTTTGGTTAGTGTGAGGCATCCAGGCACTTCCGTATTATTATTTAGCGCCAAGTCGTAAACACTGAAGCTTTccggtaaaaaaaacaaaacaaaaaaatcgcATGTTTCCCCGGTCGTGATTACAACTCGAAAACAGTATTTACTGAAATCAGAAACTGGTATTTACGGTAATTCTTGAGACTGTCTGCCCCCTGAAAAACGCCCACATAAGTAGTTTATTCAAGTCGCGATTATGactcatattttacatttaaagtggcggcgccctctagtggtcgtagtagttctgaccggagcaaagcaggaagtaaggtgacgaaGTATAAGAGCACCAAATGTCCTGGTAGCGAATTTACGAATCCTAcaatggccacgccaagacccgcccttcgaCCGCTAccattggccaggcgtccatgcttacgaaAGGTAACGTAACCCAATTAgctcaggtcctatcccctgaccaatcggctatcctaaccttaatcactcgaggtcaatgcctaaccccaaccaatcgagctgctattGAAGGGTGGGTCTttgcgtggccatagtaggatttgTGATTTGGCGTCCTGGTAAGGAGGTTGGTgggggatggatgggtcaaacaaacacaggactttcacccaggagaccgggggttcatgtcccgtttgaAAAGCAAAGTAAAAACCAAAAAGAGCCTGGTTCTGCCTGTTAAAAATaggtttttcctcgccactgtcgcaccatTGTTGGgtttctgtaaattatagagtgtggtctagacctactctatctgtagggtgtcctgagataacttctgctATGATTTGACGCTATAAATAGAATTGAAGTGAAGTAGCGTCTGATTTGAACCCTaaaaaccaccatctttttatcaactttACTCAGTAGTTTCTGTGTCTAAACCGAACCAAACCGCGACCATTACCTTCCCCCATGAGGTCGAACATATCgccgtatggtttggaggactggttgTTCCTATTAGACATAAACGTGACATGAacagaatttttattttttttggcctaATCCATTCAGACGATGTGGAACATGAAGAGCGAAAGATAAAACTCTCCGAAGTCACtgaagttcagttcacaaaaaacacacatttaaaactttACATTTCACTCAGAAAGAGCTGATTTGTGACAAAAATAAAGCACAGCTCATCTCTTCCTGCTTCAGGTTTGCTAAAAGTCTTGGCGTAGTTTGAGGCCCCCAAAACATGATTGAATTTGAAAAAACGTTATAAAGTCAAAAACCTTATAAAGCCGTACAGTACGTGTTGTTTTACATTTCTTAGtcgcagcctcctgccagatAGAACATGTCTTGGTCTTTTCACAGAGAGATAACTGACCCATACAGACATGAAGAACGATTGTGACTTTAAAGATTATCTCCCTGATCCCAAAATGTTGCTCCCGCCTCACAGCTCATAGTTAAGTTTCTTCCATTTTCTGGAATTATTGCTCCCTCAGAAAGTACAATCCCTGTTTTCCAAATAAGAGTAAGATGTGAAGAGGTATAAATCTTCACATAGAAGCAGACCTGACTCGCGCAGGAGTTGTAAATAGGTGATGGCTTTTCCTGCCCGTGGTGCCAGCTGGGTGGAGTTTGTCCCTAACAACGTCACAAAGTGTTCACACATGGACTTAgaaggccctattttaacgatcttagcgtacaaatggaacgcaccaaAGAGTAGGGGTGTAAAAAACTTAATTTCACTAAGGGGCCACACTGGagaatgagaatcacatcaagggccagacactaagggccctattttaacgatctgagtgcacggtgtgaagcgcctggtgcaggtgtgtttagggcatgtccaaatccacttttactAGTTTGACGTCGGAAAAAAAGGGTCcatgtgccgggcgcctggtcctaaagggttgtacttagtgtcttcattaatcagaggtgtgttttgggcgtaacatgcaatcaaccaatcagagatcatctcccattccctttaaaagccaggcgcgtttggaccttggagcattgctgttatgatggaggatttgcaccttaatatttgtatttgtaatcttctgcatgtgtgtgtgtgtgtgtgtgtgtgtgtGGTTGTGTGT

Function

NR:

description
solute carrier family 45 member 4-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU151092 True 4423 lncRNA 0.40 2 4429027 4480919
Loading

Neighbor

gene id symbol gene type direction distance location
slc39a6 slc39a6 coding downstream 260371 4145863 ~ 4168656 (-)
si:ch73-170d6.2 NA coding downstream 307676 4110746 ~ 4121351 (-)
cldn15la LOC104937175,LOC107383743,LOC108229378 coding downstream 401441 4021167 ~ 4027586 (-)
saga LOC100700585,LOC102198835,LOC102289605,LOC101471160,LOC103367699,LOC102794384 coding downstream 410765 4001441 ~ 4018262 (-)
proca NA coding downstream 445032 3972332 ~ 3983995 (-)
LOC120567835 LOC106949703,LOC103156008,LOC107087008 coding upstream 6409 4487328 ~ 4499789 (-)
LOC120567837 NA coding upstream 24803 4505722 ~ 4510614 (-)
si:dkey-7l6.3 NA coding upstream 38442 4519361 ~ 4527181 (-)
efr3a efr3a coding upstream 414342 4895261 ~ 5063854 (-)
LOC120568537 NA coding upstream 627122 5108041 ~ 5148701 (-)
G112061 NA non-coding downstream 19560 4392850 ~ 4409467 (-)
G112050 NA non-coding downstream 122304 4306203 ~ 4306723 (-)
G112048 NA non-coding downstream 140720 4287779 ~ 4288307 (-)
G112012 NA non-coding downstream 300655 4107443 ~ 4128372 (-)
G112009 NA non-coding downstream 328159 4100174 ~ 4100868 (-)
G112091 NA non-coding upstream 8967 4489886 ~ 4490333 (-)
G112092 NA non-coding upstream 10601 4491520 ~ 4492377 (-)
G112094 NA non-coding upstream 14445 4495364 ~ 4542182 (-)
G112095 NA non-coding upstream 20175 4501094 ~ 4608993 (-)
G112121 NA non-coding upstream 134119 4615038 ~ 4629833 (-)
G112046 NA other downstream 144944 4267538 ~ 4284083 (-)
G112043 NA other downstream 190357 4238102 ~ 4238670 (-)
G111942 NA other downstream 392064 3504498 ~ 4036963 (-)
G112233 NA other upstream 1183085 5664004 ~ 5668687 (-)
LOC120568546 NA other upstream 1242814 5723733 ~ 5746081 (-)
G112328 NA other upstream 1312244 5793163 ~ 5852447 (-)
LOC120567959 NA other upstream 1691362 6172281 ~ 6178886 (-)
zmynd11 zmynd11 other upstream 2214691 6695610 ~ 6736512 (-)

Expression

G112069 Expression in all Baseline Samples

Bar chart with 13 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 20.
End of interactive chart.

G112069 Expression in each Bioproject

Bar chart with 8 bars.
G112069 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 100.
End of interactive chart.

Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) G405578 NA non-coding CI01000299 null 3893020 ~ 3912958 (+)