G112253



Basic Information


Item Value
gene id G112253
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 5720657 ~ 5721970 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>TU151322
gtcaggatttttacaatgtcactggttttcagtttcaactttctgtcactgttttggcgtagggaggaggggccTGAGAGGAGGGACAAAGGGGCGTGGTTTACAggtaatttgcataggctactgggAGAGACCGCACCTCCACAGGCATCCTCACCGATCCATGTGTTATAACCACACACCACCGCAATGGcttccacaagttcacctggaacctccaaatctatGATATACAAGATCTTTTCTTGGAGGGGGACCATGACAGAGTGACAGAAGAGTCTGCCAGTGGAGTACTTTTACCACCCATCCAGTGCCCTCTGAGGCCGCAGACTGTGGCAGAACTGAGGGCAGCCAATGGCGGATAGCTTTGCATGACTGCACTTAACTATGTGATTCTTTACACATAAACATGGCAGGACAACAcaggaaaaacattttgtttgttattttaaaatgacaaataccACTACT

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU151322 True 471 lncRNA 0.47 2 5720657 5721970

Neighbor


gene id symbol gene type direction distance location
znf622 znf622 coding downstream 2440 5705604 ~ 5718217 (-)
march11 march11 coding downstream 21417 5684216 ~ 5699240 (-)
basp1 NA coding downstream 233996 5423991 ~ 5486661 (-)
LOC120568537 NA coding downstream 571956 5108041 ~ 5148701 (-)
efr3a efr3a coding downstream 656803 4895261 ~ 5063854 (-)
LOC120567975 NA coding upstream 88356 5810326 ~ 5812362 (-)
LOC120567973 NA coding upstream 120559 5842529 ~ 5868410 (-)
LOC120568924 NA coding upstream 152482 5874452 ~ 5885417 (-)
LOC120568045 fam134b coding upstream 166057 5888027 ~ 5917140 (-)
nol7 NA coding upstream 255311 5977281 ~ 5982538 (-)
G112245 NA non-coding downstream 16083 5704296 ~ 5704574 (-)
G112241 NA non-coding downstream 22716 5697688 ~ 5697941 (-)
LOC120568187 NA non-coding downstream 62295 5652999 ~ 5658362 (-)
G112212 NA non-coding downstream 333906 5386550 ~ 5386751 (-)
G112197 NA non-coding downstream 520549 5199742 ~ 5200108 (-)
G112332 NA non-coding upstream 52443 5774413 ~ 5791763 (-)
G112352 NA non-coding upstream 200777 5922747 ~ 5993773 (-)
G112383 NA non-coding upstream 360671 6082641 ~ 6105817 (-)
G112381 NA non-coding upstream 391492 6113462 ~ 6116144 (-)
G112453 NA non-coding upstream 625365 6347335 ~ 6347853 (-)
G112233 NA other downstream 51970 5664004 ~ 5668687 (-)
G112046 NA other downstream 1436574 4267538 ~ 4284083 (-)
G112043 NA other downstream 1481987 4238102 ~ 4238670 (-)
LOC120568325 NA other downstream 2087258 3629565 ~ 3633399 (-)
LOC120568522 NA other downstream 2135131 3564546 ~ 3585526 (-)
LOC120568546 NA other upstream 1763 5723733 ~ 5746081 (-)
G112328 NA other upstream 71193 5793163 ~ 5852447 (-)
LOC120567959 NA other upstream 450311 6172281 ~ 6178886 (-)
zmynd11 zmynd11 other upstream 973640 6695610 ~ 6736512 (-)
si:ch211-267e7.3 LOC103370300 other upstream 1234470 6956440 ~ 6990122 (-)

Expression



Co-expression Network