LOC120568546


Basic Information

Item Value
gene id LOC120568546
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 5723733 ~ 5746081 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU151457
GCCTTCTTTCTGTACTGACTCTAAAGCAGCACATCTGCATCTGCTCTCTACAATCCAAACATGGGAAGCCCATTCAGCCTACTCATTCTATTCAGCCTATTCAGCAAATATGCTCAGCAGCAGACCTGCTCTTCTCTCCAGAACCCAAATATGGACTGCAAATATGCCGAAAATGAACCGACCAGATACAATAATGAGGTGATCAGGATTGTGATGGTGGGGAAGACCGGAGTTGGGAAGAGCCACAGGAAACACCATTCTGGGAAAACAGTACTTTAAATCAGAGTTCTCCCCTAAATCTTTGACGGTAGACTGTGCAAAGGCCATAGGTGAAGTGGATGGACAAAAGGTTGCTGTTATTGACACCCGGGTCTGTTCGCACAAAGGATTGATTATAATAAAACCAGTAAAGATATTGCCCAGAGCGTTGCTTATGCTTCTCCTGGACCTCACATCTTCCTGGTCGTCATCAAACTGGGCAGATtcacagaggaagaaaagaagacGGTGCAGAAGATTCAGGAAATCTTTGGAGAGGAAGCagacaaatacagcatggttcTCTTTACCCATGGTGACCTGCTCAAAGGGAAACCTATTGAGGAGTTCTTGAAGGACAGCGAAGAGCTGCAGGAACTTGTGGCCAAATGTAACGGCCAGTACCACGTCTTTAATAATGAGATCAATGATCGTTCTCAGGTCAGGGAGCTGCTCGACAAGATCAGATATATAACACAGAAGAATGGAGGAAGTCATTACACCACTGAAATGTTCCAGGAGGCAGAGAGGAAGATAGAAGAGGAGAAACAACGAATCcttaaagagaaagaagagcaaaTGCGCAAAAAGGAAGAGGAATGAAGAAGAAACTAGAGGAAAAGTATGAGCAACTAATAAAGGAAGCAGAGGCTGACAGAGAGAGGATGAAAGTGTTACTTGCAGCTCGTGTGAGAGATATGGAGGAGCAGAGGAAAAATATAGAGAAGAGCAGGAAAATCGGGCCAGACGGGAAGCTGAGAACAGTAATCCAATAATTAAAGCGTGTAAAAGCTATCTGGAATTTCTTCTTTGGGTAAAATAAGAAATTTGCTGGTTTGCAGGTGAAATTATGACTTGCTGAAAAGCAGCAGCTTTACCAAACTGTTCTCTTCACAGCCCCTTTTTGATTTCCGTATGTAGTGCTTCAATGTCAAATAAACACAAGTAAATTTCACGGGTTAAAAATTGTACAAGATGAGTGATACATGTTTAGAAGTGCCACCGCTTGTAAAGAGCATGTTTCTATGGTGATCATCAAATAAATCTGATAATAAAGGAGTAATGCTTTACTGACATCAGTCAGAGGTTAAAGATactaaatacagttatgaagGTCTCCTTCCATTTAATGTGACACAGAACCAGGTAGAagcataaaaagaaaacagatttttacacacaaacttctttcattcattttatttcatttcattttatgtaACTGTGAAATAATAACTGTAAATGGATGCCACCGAGCTGCACTCCTTTGAGAAACAAACTTTGTACAGTAGCCTCCTCCACTGGCCTGGAAGAACTGTAAAGTCTGAATGATACAGCTGGAGAGAAATTAATTAAAGGACAGAATATGtccaaaaactaaaataagtAGGCTTTTACTTTAAAATCTATTCCAAAAATTATGAAGTCATTGCTAATTTAAACTCTCAATAACACAATCAGATTATTAAATCTCACATTGAggtatagttttatttttaaggtGAAATGTTTAAGTATATATTTCATTAAACCAAAGTAGACCGGAATacaaaaattcacatttctattCCATTTATTCTTCCACATTGCCATTTTGGATTTTGTATGTAAAAACTATTTTTACAATATTCTATTGTAGTATTTAAACATCAGCCATTAATAAAATGTGATGCCATCATATCACAAGACATTGAGACTATATTTCTACTTGGTACGTTTTTCTTTCATTGCAGCTTTGATTTTTTCTTTacttatttcattatattttaaaatgtcccTTACTGACTTACTGTTTTCTTTAATGAAGCCTCCCAG
>XM_039816131.1
ACTGACTCTAAAGCAGCACATCTGCATCTGCTCTCTACAATCCAAACATGGGAAGCCCATTCAGCCTACTCATCCTATTCAGCCTATTCAGCAGATATGCTCAGCAGCAGACCTGCTCTTCTCTTCATAACCCAAATATGGTCTGCAAATATGCCGAAAATGAACAGACCATATATAATAATGAGGAGATCAGGATTGTGTTGGTGGGGAAGACCGGAGCTGGGAAGAGCGCCACAGGAAACACCATTCTGGGAGAACAGTATTTTAAAACCGATTTCTCTCCTAAATCTTTGACTAAACACTGTGCTAAGGCCAATTCTAAAGTGGATGGACTAAAGATTGCTGTTATTGACACTCCAGGTGTGTTTGACACGAGAATTGATGAAAAGAAAACCATTAAAGATATTACCCAGAGCGTTGCTTATGCTTCTCCTGGACCTCACATCTTCCTGGTCGTCATCAAACTGGACAGATtcacagaggaagaaaagaagacGGTGCAGAAGATTCAGGAAATCTTCGGAGAGGAAGCagacaaatacagcatggttcTCTTTACCCATGGTGACCAGCTCAAAGGGAAACCTATTGAGAAGTTCTTGAAGGACAGCGAAGAGCTGCAGGAACTTGTGGACAAATGTAACGGCCAGTACCACGTCTTTAATAATGAGATGAATGATCATTCTCAGGTCAGGGAGCTGCTCGACAAGATCAGAAACATAACAGAGAAGAACGGAGGAAGCCATTACACCACTGAAATGTTCCAGGAGGCAGAGAGGAAGATAGGAGAGGAGAAACGACGCATCcttaaagagaaagaagagcaaatgcgcaaaaaggaagaggaaataaagaagaaaatagaggaaaAGTATGAGTATGAGCTACAAATAGGAAAACCAGCTGAGTGGATGAAAATGATAGTTGCAGTTCGTGACAGAGAAATGGAGACGAGTGTAACCATATATAGGGTTGCGCAGGAAAATTATGCCAGACTGGAAGCTGAGAACAGTTGTTTAATACTTTACCTGATAAAAGTTAtcttcaatttttttaaaaatgtttgggGGAAACAGCAGACCTGCACTTCTCTACATAACCCAACAATGGCCAGCAAATACTCCAAAAATGAACCGACCATACACAATAATGAGGCACTCAGGATTGTGTTGGTGGGGAAGACCGGAGTTGGGAAGAGTGCCACAGGAAACAGCATTCTGGGAAAACTTTGCTTTAAATCAGAGTTTTCTTTTAACTCTTTGACTGAAGAATGTGAAAAGGTTTTTGGTGTAGCGGATGGGCAATTGGTTTCTGTTATTGACACCCCAGGTCTGTTTGACACCAGCGTTGATGAAAAGAAAACGAGGACAGATATTGCCCAGAGCATTTCTTATGCTTCTCCTGGACCTCACATCTTCCTGGTCGTTATCAAAATAGGCCGATacacagaggaagagaagaagacaGTTCAGAAGATAAATGAACTTTTTGGTGAGGATGCAGAAAAATACAGCATGGTTCTCTTTACCCATGGTGACCTGCTCAAAGGGAAAACTATTGAGGAGTTATTGACGAACAGCAGAGACCTGCAGGAACTTGTGGCCAAATGTAACGGCCAGTACCAAGTCTTCAATAATGAGGTCAAGGATCGTTCTCAGGTCAGGGAGCTACTCAACAAGATCAGAAACATAATAAAGAAGAACGGAGGAAGTCATTACACCACTGCAATGTTCCAGAGGGCAGAGAGGGCAATAGAAGAGGAGAAACAACGAATCcttaaagagaaagaagagccACTgcgcagagagagggaggaactgAAGAAGAAACTAGAGGAAATGCTTAGAAAACAAATGAGAGAAGAGAAGGctgacaaggagagagagaaaaagctaATGGTAGCTCATGAACAAGAAATGGACGAGAAAACGAAGCAACTGAGCGAATTGCAGGAAAAGCAAGCTAGACAAGAAGCTGAGGAAAGCACTGGCGTTCTCAAAATTATAGTTTTGGTTGCATCAGCATTAGCCTTGGGTGctgtttttattgtgaaagcaAGAAAATAGCTGTATTGATATTTGGCTGTAACATGCTGCATCTTGTGCAGTGAATCCTCTTTCAAGTGTTTTTTGTTACAGTTTGAACATTTTACTGGTTAATGataatttacatattttaagTGTTGGTTTGTTGTGTATGATGCCACTTAGTCACCTGGATACTATATGCTCTTTTCATCAAGAATCACAATTGAAATATGAGTCTGTCTTTGTGGAAATTTGTTTTAATCATTGTTAACATCATGGGTGTGGTTTAATGTCCTCTGCTGTTAATAATTGTACAAGATTATCCATACATGTTTAGTGGTGCCTAGATTGTAAAGACTTTGTTGCTATGCTGATTATGAAATAAAGCTTTTAATATT

Function

GO:

id name namespace
GO:0046930 pore complex cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU151457 False 2073 TUCP 0.38 3 5740645 5746081
XM_039816131.1 True 2425 mRNA 0.41 6 5723733 5746068

Neighbor

gene id symbol gene type direction distance location
znf622 znf622 coding downstream 5516 5705604 ~ 5718217 (-)
march11 march11 coding downstream 24493 5684216 ~ 5699240 (-)
basp1 NA coding downstream 237072 5423991 ~ 5486661 (-)
LOC120568537 NA coding downstream 575032 5108041 ~ 5148701 (-)
efr3a efr3a coding downstream 659879 4895261 ~ 5063854 (-)
LOC120567975 NA coding upstream 64245 5810326 ~ 5812362 (-)
LOC120567973 NA coding upstream 96448 5842529 ~ 5868410 (-)
LOC120568924 NA coding upstream 128371 5874452 ~ 5885417 (-)
LOC120568045 fam134b coding upstream 141946 5888027 ~ 5917140 (-)
nol7 NA coding upstream 231200 5977281 ~ 5982538 (-)
G112253 NA non-coding downstream 1763 5720657 ~ 5721970 (-)
G112245 NA non-coding downstream 19159 5704296 ~ 5704574 (-)
G112241 NA non-coding downstream 25792 5697688 ~ 5697941 (-)
LOC120568187 NA non-coding downstream 65371 5652999 ~ 5658362 (-)
G112212 NA non-coding downstream 336982 5386550 ~ 5386751 (-)
G112332 NA non-coding upstream 28332 5774413 ~ 5791763 (-)
G112352 NA non-coding upstream 176666 5922747 ~ 5993773 (-)
G112383 NA non-coding upstream 336560 6082641 ~ 6105817 (-)
G112381 NA non-coding upstream 367381 6113462 ~ 6116144 (-)
G112453 NA non-coding upstream 601254 6347335 ~ 6347853 (-)
G112233 NA other downstream 55046 5664004 ~ 5668687 (-)
G112046 NA other downstream 1439650 4267538 ~ 4284083 (-)
G112043 NA other downstream 1485063 4238102 ~ 4238670 (-)
G111942 NA other downstream 1686770 3504498 ~ 4036963 (-)
G112328 NA other upstream 47082 5793163 ~ 5852447 (-)
LOC120567959 NA other upstream 426200 6172281 ~ 6178886 (-)
zmynd11 zmynd11 other upstream 949529 6695610 ~ 6736512 (-)
si:ch211-267e7.3 LOC103370300 other upstream 1210359 6956440 ~ 6990122 (-)
cdh6 LOC103366829,LOC104926815 other upstream 1330528 7076609 ~ 7163670 (-)

Expression


Co-expression Network