G112332


Basic Information

Item Value
gene id G112332
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 5774413 ~ 5791763 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU151460
TAAATACAGGACATGAAGGTCTCCTTCCATTTAATGTGACTTACGTGTCACACAGAACCAGGTAGAAACATACAAAGAAAACagatttttacacacaaacttctttcattcattttattttgtttcattttatgtAACTGTGAAATAATAACTGTAAATGGATGCCACCGAGCTGCACTCCTTTGAGAAACAACCTTTGTACAGTAGCCTCCTCCACTGGCCTGGAAGAACTGTAAAGTCTGAATGATACAGCTGGAGAGAAATTAATTAAAGGACAGAATATGTCCAAAAACCTAAAATAAGGAGGCTTTTGAAATTACTTTAAAATCTATTCCAAAAATTTTGAACTCATCGC

Function

GO:

id name namespace
GO:0019538 protein metabolic process biological_process
GO:1901564 organonitrogen compound metabolic process biological_process
GO:0006508 proteolysis biological_process

KEGG:

id description
ko04080 Neuroactive ligand-receptor interaction
ko04972 Pancreatic secretion
ko04974 Protein digestion and absorption
ko05164 Influenza A

RNA

RNA id representative length rna type GC content exon number start site end site
TU151460 True 355 lncRNA 0.35 2 5774413 5791763

Neighbor

gene id symbol gene type direction distance location
znf622 znf622 coding downstream 56196 5705604 ~ 5718217 (-)
march11 march11 coding downstream 75173 5684216 ~ 5699240 (-)
basp1 NA coding downstream 287752 5423991 ~ 5486661 (-)
LOC120568537 NA coding downstream 625712 5108041 ~ 5148701 (-)
efr3a efr3a coding downstream 710559 4895261 ~ 5063854 (-)
LOC120567975 NA coding upstream 18563 5810326 ~ 5812362 (-)
LOC120567973 NA coding upstream 50766 5842529 ~ 5868410 (-)
LOC120568924 NA coding upstream 82689 5874452 ~ 5885417 (-)
LOC120568045 fam134b coding upstream 96264 5888027 ~ 5917140 (-)
nol7 NA coding upstream 185518 5977281 ~ 5982538 (-)
G112253 NA non-coding downstream 52443 5720657 ~ 5721970 (-)
G112245 NA non-coding downstream 69839 5704296 ~ 5704574 (-)
G112241 NA non-coding downstream 76472 5697688 ~ 5697941 (-)
LOC120568187 NA non-coding downstream 116051 5652999 ~ 5658362 (-)
G112212 NA non-coding downstream 387662 5386550 ~ 5386751 (-)
G112352 NA non-coding upstream 130984 5922747 ~ 5993773 (-)
G112383 NA non-coding upstream 290878 6082641 ~ 6105817 (-)
G112381 NA non-coding upstream 321699 6113462 ~ 6116144 (-)
G112453 NA non-coding upstream 555572 6347335 ~ 6347853 (-)
G112460 NA non-coding upstream 565035 6356798 ~ 6357990 (-)
LOC120568546 NA other downstream 28332 5723733 ~ 5746081 (-)
G112233 NA other downstream 105726 5664004 ~ 5668687 (-)
G112046 NA other downstream 1490330 4267538 ~ 4284083 (-)
G112043 NA other downstream 1535743 4238102 ~ 4238670 (-)
LOC120568325 NA other downstream 2141014 3629565 ~ 3633399 (-)
G112328 NA other upstream 1400 5793163 ~ 5852447 (-)
LOC120567959 NA other upstream 380518 6172281 ~ 6178886 (-)
zmynd11 zmynd11 other upstream 903847 6695610 ~ 6736512 (-)
si:ch211-267e7.3 LOC103370300 other upstream 1164677 6956440 ~ 6990122 (-)
cdh6 LOC103366829,LOC104926815 other upstream 1284846 7076609 ~ 7163670 (-)

Expression


Co-expression Network