G112531


Basic Information

Item Value
gene id G112531
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 6393143 ~ 6400383 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU151715
GTTCAGCCCTGTGTCACCCTTGGGATCCCTAACTGAGAGTCTCGTTCACCAAGGAGCTCCAGACAACCACGGTCGGTTTAAAATGTGACGAGTAACAGAGCTGGTGGGAAGTTTTGGACCCTGCATTTAAACACCCTGAAGATTTTGGACATCAGGGTGGTTTTAAGGACAGGAGAGCTAGGACTCAGGCAGGTGGTGGACCCCAGAGAGGGAAAGGACCGAGACATATCTTGGAGGGTGATGGCAAAGctTCTTCATCTTCGCTCGTTGCCTGACTGGAACCTCagcccgtctctctctctcgctgcgAGCTGACGACCTGAAGCCGGCTGAAAACAAACGGCTGTTCCAACCCCGCTGACATTTCCAGCCCAGCCCTCAGATTTGCTGTGCTGCGAGGCGGCTGACAGAGAGGCCAGATGAATATTTATGGCGCTTTGTGCCTCCTGCGAGAAAGGCCACCCGGCTCCCAGAGAGGAGGGCGACAGCTGATGACCCAACGGGCCGACTGACTGCACGTTGTTGTACCTCAACCTCATGCTGGGTTTAGACCTAAATTCTCGGTTTTTAAGCTTTATTAATCCGGGCGAAGCTTGATGTGTTTATGTTTGCAGGAGTTGTAGCTGCTCAAGACAAATCGCACCATCaccactaggggtgggggaaaaaatcgatacagcatagtatcgcgatatttcccgtggcaatactgtatcgatacacagacgccaagtatcgatcttttattatttaaattgcacatgagaatttaactttttggtagtagaataataaaatcaattgcttattCAGTCCACCAGATGGCGCTGTTTGTTTTCTGGTGAGGTCAGCGGGGTGACTGTCAGCGTGCAGGAGGATGTAGATAAAATAAACATGGCAGCGTCAGAGAAAGAAATTAGAAATGCACCATCGGCGTTTAAATCAAGTGTTTGGACTTTTTCGGAGGGGACAACTGAGATGGATATGAGACATGGGATTTGCAAGGAGTGTCGTATGCAAATAAAATACTCAGGGAATACCACAAACATGAGGGCTCATCTCACACGCCACCATCCAGAG

Function

GO: NA

KEGG:

id description
ko04744 Phototransduction

RNA

RNA id representative length rna type GC content exon number start site end site
TU151715 True 1080 lncRNA 0.49 2 6393143 6400383

Neighbor

gene id symbol gene type direction distance location
gtpbp4 gtpbp4 coding downstream 93172 6284160 ~ 6299971 (-)
LOC120569024 wdr37,LOC102795438 coding downstream 109645 6256300 ~ 6283498 (-)
trnas-uga_20 NA coding downstream 165359 6227703 ~ 6227784 (-)
trnas-uga_19 NA coding downstream 166397 6226665 ~ 6226746 (-)
trnas-uga_18 NA coding downstream 172046 6221016 ~ 6221097 (-)
LOC120568553 NA coding upstream 338875 6739258 ~ 6740436 (-)
LOC120568066 NA coding upstream 340715 6741098 ~ 6743701 (-)
LOC120568556 NA coding upstream 347071 6747454 ~ 6748819 (-)
LOC120568068 NA coding upstream 349077 6749460 ~ 6771396 (-)
LOC120568069 NA coding upstream 349077 6749460 ~ 6751778 (-)
LOC120568643 NA non-coding downstream 161 6388094 ~ 6392982 (-)
G112462 NA non-coding downstream 33191 6359472 ~ 6359952 (-)
G112461 NA non-coding downstream 33814 6358079 ~ 6359329 (-)
G112460 NA non-coding downstream 35153 6356798 ~ 6357990 (-)
G112453 NA non-coding downstream 45290 6347335 ~ 6347853 (-)
G112537 NA non-coding upstream 38676 6439059 ~ 6439839 (-)
G112540 NA non-coding upstream 79695 6480078 ~ 6480789 (-)
G112577 NA non-coding upstream 211679 6612062 ~ 6612306 (-)
G112584 NA non-coding upstream 223822 6624205 ~ 6624408 (-)
G112585 dip2c non-coding upstream 248467 6648850 ~ 6651813 (-)
LOC120567959 NA other downstream 214257 6172281 ~ 6178886 (-)
G112328 NA other downstream 540696 5793163 ~ 5852447 (-)
LOC120568546 NA other downstream 647062 5723733 ~ 5746081 (-)
G112233 NA other downstream 724456 5664004 ~ 5668687 (-)
G112046 NA other downstream 2109060 4267538 ~ 4284083 (-)
zmynd11 zmynd11 other upstream 295227 6695610 ~ 6736512 (-)
si:ch211-267e7.3 LOC103370300 other upstream 556057 6956440 ~ 6990122 (-)
cdh6 LOC103366829,LOC104926815 other upstream 676226 7076609 ~ 7163670 (-)
trnak-uuu_16 NA other upstream 2087084 8487467 ~ 8487539 (-)
G113070 NA other upstream 2380069 8780452 ~ 8790042 (-)

Expression


Co-expression Network