G112545


Basic Information

Item Value
gene id G112545
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 6684097 ~ 6688456 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU151734
GTATTATCTCGAGTGAAACTCACTCGCGTCCAGCGTATTACGGAAAAATAGAGATATATGATTATAGATTATATAAAAAGTCAAGGATTCACAGCTGGGAGAAGCAGATTGACGCGCGGTGCTTTGTTAtctgcatgttggtctcagatGTTGCAATCAGACGAATTAGAAGTCAAAGCTTGGAGGAGTTTTATTCCACAGCGAGAGTTCTGAAATCCAAACATCAACTTTGATTAGCTCTAAGTCTTGATTTCTCTCCAAAAAGTCATTCACCATTTGTgcccttaaagtgctcatattatgctccgTTTCAGGTTCATAagtgtatttagaggttgtgctgcacattgctgcagctcctcttttcaccctgtgtgttgagctctctgttttagctacagagtgagacctctcacttctgttccatctttgttgggagtcgcacatgtgcagtagctaggtaaggactactagccagtcagaaccagagtatgagggcgtgtcctgacagtacctaggtaaggactactagccagtcagaagcagagtatgagggcgtgtcctgacagtacctaggtaaggactactagccagtcagaagcagagtatgagggcgtgccatgctagcagctaggcgagcattataacgtgtgttgtctctgaagtaaaggctggactacaatagagctgtttggagcagttggtgaacagtgttttctgttggagatggtaagtccctttgggggggactttttcactttgtaaacctataacgtgaaaaaaaacagatataTAACACGTGTTGCTGTGCAATTAactgtctcagaaataattgcgattaataatataattgtcaaatttaaaaaaaaaaaaaacttaatgtattacttttttcaaacaaaagtttagactcagattaatattctaagtgtctgacaacattatggaaaggatttctaatgagggtgacctttctgttaaagagtaagatcctttttttaaacataaaaacatccgtgaAATTGCATtccctaaacccaccagactccatgtaaataatcagtaattttagcatcgtaaaacacacttcattcaaagtcaacagaaactaaataaaactatgaaaggctgttttgggtcgtctttccactttttccagccatcacaactctacttttggttgaaataaacacatagtttactgatctACATGTGAAGATATGTTTGCTCTATAcgcgctaaaagtattgctttttaaatggagtctggtggatttaGCGCTaacgacttcagagctgtttctggttcaacagaaaggtctcaaagaggttttaaaggtctctctctgtagggatcctttccataatgttgtcagacacttagaatattaatctgagtctgtcagcggctaaacaagcacttttgtgaaggtaaacaCAAGCAGGACAACTggcctattaacttacattgtagcttgtttcaccgctgccgactgcagcgatctggcttaatactggaccgatgtcaaagattgttgttcccatcagtcacacagattagattcaactttattgtcattgtgcagagtacaagtacaaagaaatgcagtttgtgtccaaccagaagtgcaaaaagagcagaaaagtgcaatgtgatatacaagtatagacaggtatagacaggtggtgcatagagaggacaagaaatatagtgcagtgtagacagtagtgtacagttggtttacagaaggtggtttagagtaatataaattaaatataaatatgtgcagtgtattagcagttaccttatcAGAGCAGAATAACTATGGCTATGCAATAttaacaatgtatgaacaacactttgacacaaaaacaggaaaatagtttccaggttgaaaaaaaaacccagaagttaccctttaactggAGTTTGTGCCACTTTTCTAAAACCATTATGATTTTCCACTTTGGATCAGAACTCTTTACATATCACGTGTTTATTCATCAGGAAACAAAtcagatctttaaaatgtaagaaatAGGAATTAAGTTTAAAATTTTTCAAACTCTCCTTACTGGAATAAAACTAGTCGATTTGGAAAACAGACCAACAAGCAGCAACTGGAttatttttaggaaaaaaaTCAAGGTGAATCCTCACGAACAGCTTTGACGGCAGGTAGGAGAGCAGCCgcgacttttttatttttattttcggTTGTTGTAAATACCAGAGTCAGAAAGTCCTGCATATTTTTTACACGGACCGATCAATCAGGGCTCATACAGTGATGTCACGacaggaacaaaaaaaaaaaaaagactgaaaacaggaagcaggaagTGAAGGCGTTCCACCCAGAGGCCCCCTTTAAACCCGGCACAGAGCTGCGGAGGGGGTCAAAGGTCGCGGGAATACCAGAATGTTCTAGTTTCAACACGcgggaaagaggaagaaaaagaaaaatagagcactttcttcacagtttgtttcttttatcagcaaaatgtatgtCGTCCCCTCccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU151734 True 2526 lncRNA 0.39 2 6684097 6688456

Neighbor

gene id symbol gene type direction distance location
LOC120568642 dip2c coding upstream 111751 6372433 ~ 6572346 (+)
LOC120568706 larp4b coding upstream 332356 6302295 ~ 6351741 (+)
LOC120569021 NA coding upstream 433435 6191772 ~ 6250662 (+)
LOC120568554 NA coding downstream 56274 6744730 ~ 6745611 (+)
rnf2 rnf2 coding downstream 301045 6989501 ~ 7003033 (+)
LOC120568979 LOC102307644 coding downstream 700035 7388491 ~ 7466201 (+)
LOC120568864 LOC103365115 coding downstream 800017 7488473 ~ 7614340 (+)
LOC120568159 NA coding downstream 942199 7630655 ~ 7730468 (+)
G112549 NA non-coding upstream 65455 6618366 ~ 6618642 (+)
G112514 NA non-coding upstream 152644 6531108 ~ 6531453 (+)
G112511 NA non-coding upstream 203183 6479712 ~ 6480914 (+)
G112510 NA non-coding upstream 210236 6473605 ~ 6473861 (+)
G112499 NA non-coding upstream 249357 6430061 ~ 6434740 (+)
G112547 NA non-coding downstream 6453 6694909 ~ 6698520 (+)
G112563 NA non-coding downstream 69148 6757604 ~ 6767081 (+)
G112560 NA non-coding downstream 110870 6799326 ~ 6804346 (+)
G112616 NA non-coding downstream 256059 6944515 ~ 6945102 (+)
G112639 NA non-coding downstream 277878 6966334 ~ 6966666 (+)
LOC120568552 dip2c other upstream 1825 6574796 ~ 6682272 (+)
G112400 NA other upstream 362107 6251390 ~ 6321990 (+)
LOC120568055 NA other upstream 667497 6003685 ~ 6016600 (+)
epdr1 epdr1,LOC104965688 other upstream 690386 5983857 ~ 5993711 (+)
LOC120568547 LOC106674584,LOC106676354,LOC106675207,LOC106675343,LOC106676464,LOC106676424,LOC106675739 other upstream 894680 5788223 ~ 5789417 (+)
G112562 NA other downstream 52645 6741101 ~ 6770912 (+)
LOC120568557 NA other downstream 183869 6872325 ~ 6873814 (+)
LOC120568216 NA other downstream 202531 6890987 ~ 6949130 (+)
G112655 NA other downstream 318786 7007242 ~ 7009157 (+)
G112670 NA other downstream 346571 7035027 ~ 7035700 (+)

Expression


Co-expression Network