LOC120568552 (dip2c)


Basic Information

Item Value
gene id LOC120568552
gene name dip2c
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 6574796 ~ 6682272 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU151740
AGCAACTGGTCAACACTCTGAAGAGACCCAAACGGCCGCCGTTAAGAGAGTTTTTTGTCGACGACTTCGAGGAGCTTCTGGAAGTCCAGCAGCCAGACCCCAACCAGCCCAAGGCGGAGGGGGCCCAGATGGTGTTGCTGCGGGGCGAGCAGCTGGGCGTGGTAACCAACTGGCCCCCGTCCCTGGAGGCGGCCCTGCAGAGGTGGGGTACCATCTCTCCGAAGGCGCCCTGCCTCACCACCATGGACAACAACGGCAAGCCGCTCTACGTGCTCACCTACGGAAAACTGTGGTCCAGAAGTGTGAAGGTGGCCTACAACCTGCTGCACAAACTGGGAACCAAACAGGAACCACTCGTCAGACCTGGAGACCGGGTGGCGCTGGTCTTCCCCAACAACGACCCTGCTGCCTTCATGACTGCTTTTTACGGCTGCCTGCTGGCCGAAGTCGTCCCTGTGCCAATAGAAGTACCGCTGACCAGGAAGG
>XM_039816134.1
ATGGATGGCGAAGTGGACGTTGAGGCGTTGAACGCAGCTCACAGCGAAGCAGCTCCACAGATCAGTTGCCAGAGTTTACAGATGGGAGCTCATCGCCACGCTTGGCTGAAGATCTCTCGCTCTGATAACACGGGAGAGGATTTCATCATCTTTCAACTGGTCAACACTCTGAAGAGACCCAAACGGCCGCCGTTAAGAGAGTTTTTTGTCGACGACTTCGAGGAGCTTCTGGAAGTCCAGCAGCCAGACCCCAACCAGCCCAAGGCGGAGGGGGCCCAGATGGTGTTGCTGCGGGGCGAGCAGCTGGGCGTGGTAACCAACTGGCCCCCGTCCCTGGAGGCGGCCCTGCAGAGGTGGGGTACCATCTCTCCGAAGGCGCCCTGCCTCACCACCATGGACAACAACGGCAAGCCGCTCTACGTGCTCACCTACGGAAAACTGTGGTCCAGAAGTGTGAAGGTGGCCTACAACCTGCTGCACAAACTGGGAACCAAACAGGAACCACTCGTCAGACCTGGAGACCGGGTGGCGCTGGTCTTCCCCAACAACGACCCTGCTGCCTTCATGACTGCTTTTTACGGCTGCCTGCTGGCCGAAGTCGTCCCTGTGCCAATAGAAGTACCGCTGACCAGGAAGGACGCCGGCAGTCAGCAGATCGGCTTTCTGTTGGGGAGCTGTGGAGTGACCGTGGCTCTGACCAGCGACGCCTGCCATAAAGGCTTACCTAAGAGTCCCACTGGAGAGATCCCACAGTTCAAAgGCTGGCCCAAGGTGCTGTGGTTCGTCACAGAGTCCAAACACCTCTCCAAACCTCCCCGAGACTGGTTCCCACATATCAAGGACGCCAACCAGGACACGGCCTACATcgagtATAAGACCTGTAAGGACGGCAGTGTCCTCGGCGTGACGGTGATGAGGATAGCCATGCTCACACACTGCCAGGCCCTCACACAGTCCTGCTCATACAcagaagCTGAGACCATAGTGAATGTATTAGACTTCAAGAAGGACGTAGGACTGTGGCACGCCGTCCTGACTAGTGTAATGAATATGATGCACGTCATCAGTATTCCCTACGCTCTCATGAAGGTCAACCCTCTGTCCTGGATCCAAAAAGTCTGCCAGAACAAAGCCAAGGTGGCGTGCGTGAAGTCGCGGGACATGCACTGGGCTCTGGTGGCCCACCGGGAGCAGCGGGACATCAACCTGAGCTCCCTGCGCATGCTGGTGGTGGCTGACGGTTCAAATCCCTGGTCCATCTCGTCCTGTGACGCCTTCCTCAACGTGTTCCAGACGAAAGGTTTGAAGCCTGAGGTCATATGTCCCTGTGCCAGCTCCCCCGAGGCCCTGACTGTAGCTTTAaggagGCCCGTGGAGGAGGGCAGCGACCCCCCCGGCCGCGGCGTCCTGTCCATGCAGGGGCTGAGCCACGGTGTGATCCGGGTCGACTCGGAGGAGAAGCTGTCGGTGCTCACGCTGCAGGACGTGGGCTCCGTCATGCCCGGAGgtATGATGTGCGTGGTGAAGGCCGAAGGCGTTCCTCAGCTCTGTAAGACGGACGAGATCGGAGAGTTGTGCGTTTGTACTGTTGCCACGGGAACGTCCTACTACGGCCTGGCCGGCATGACCAAGAACACCTTcgagGTCTTCCCTGTGAGCAACACCGGGGCTCCCATCGGTGAGTTTCCCTTCACTAGGACCGGCCTGCTGGGGTTCATCGGACCCGCGGGGCTGATCTTCGTGGCGGGGAAGATGGACGGTCTGATGGTGGTCGGAGGGCGGCAGCACAACGCCGACGACATCGTCGCCACGGCGCTCGCTGTGGAGCCAATGAAGTTTGTGTACAGGGGCAGgaTAGCGGTGTTCTCCATCACCGTGCTGCATGATGAGAGGATCGTGGTGGTGGCGGAGCAGCGTCCCGACTCCACCGAGGAAGACAGCTTCCAGTGGATGAGCCGAGTTCTGcagGCGATAGACGGCATCCATCAGGTAGGGGTGTACTGCCTGGCTCTGGTGCCCTCCAACACTCTGCCCAAGACTCCCTTGGGTGGCATCCACCTGTCGGAGACGAAGCAGCTGTTCCTGGAGGGGGCGCTGCACCCCTGCAACGTGCTCATGTGTCCGCACACCTGCGTCACCAACCTGCCCAAACCCCGGCAGAAGCAGCCAGAGATCGGTCCTGCGTCTGTGATGGTGGGGAACCTGGTGTCGGGGAAGAGGATCGCCCAGGCCAGCGGCAGGGATCTGGCTCAGATCGAAGACAATGACCAGGCAAGGAAGttcctcttcctgtcagaggtGTTACAGTGGAGAGCCCAGACCACTCCGGACCACGTCCTGTACACGCTGCTCAACTCCAggggtACGATAGCCAGCTCTCTGACTTGTGTTCAGCTGCATAAGAGGGCAGAGAAGATCGCCGGCATGCTGGCTGAACGGGCCCACCTACAGGATGGAGACCACGTGGCACTGGTCTACCCTCCaGGTATCGACCTCATCGTGGCCTTTTACGGCTGCCTGTACGCCGGCTGCGTGCCGATCACGGTGCGACCGCCACACCCGCAGAACATCGCCACCACGCTGCCCACCGTCAAGATGATCGTGGAGGTGAGCCGCTCGGTGTGTGTGATGACCACACAGCTCATCTGTAAACTGCTGAGGTCCAAGGAGGCCTCGGCAGCCGTGGACGTCCGGACCTGGCCCCCCGTCCTGgacacagacGATTTGCCAAAGAAGAAACCTCCTCTGCTGTATAAGCCGTCCAACCCCGACACCCTGGCCTACATGGACTTCAGTGTCTCCACAACTGGCATGCTCGCTGGAGTCAAgATGTCTCACACAGCCACCAGTGCCTTCTGCCGCTCCATCAAGCTGCAGTGTGAGCTTTACCCGTCCAGGGAGGTCGCCATCTGCCTGGACCCGTACTGCGGCCTGGGCTTCGTCCTCTGGTGCCTTTGCAGTGTGTACTCAGGTCACCAGTCCATCCTGATTCCTCCGGCCGAGCTGGAGGTGAACCCGGCTCTCTGGCTGTCGGTCGTCAGTCAGTACAAAGTCCGCGACACTTTCTGCTCCTACAGCGTCATGGAGCTCTGCACCAAAGGCCTCGGCCTGCAGACCGAGTCGCTGAAGTCTCGAGGGTTGGACTTGTCTCGGGTGAGGACGTGTGTGGTTGTAGCGGAGGAGCGTCCCAGGATAGCCCTGACGCAGTCCTTCTCCAAACTCTTCAAGGACCTGGGGCTGCACCCTCGAGCCGTCAGCACCTCCTTCGGCTGCCGGGTCAACCTGGCCATCTGCCTGCAGCCTCACAGGCTGGGAAAGCTTGCTGACCAGGGAACCTCAGGACCTGACCCCACGACTGTGTTCGTCGATATGAGAGCGCTACGGCATGACAGGGTGCGACTAGTAGAGAGGGGGTCACCACACAGCCTGCCTCTGATGGAGTCTGGGAAGATCCTGCCGGGGGTCCGAATCATCATCGCCAACCCAGAGACCAAGGGACCAATGGGAGAGTCACATCTGGGCGAGATCTGGGTGCACAGCGGCCACAACGCCAGCGGCTACTTCACCGTCTACGGGGACGAGGCGCTGCAGTCGGACCATTTCAACTCCAGGCTCAGCTTCGGAGACACGCAAACCGTCTGGGCTCGAACCGGATACCTGGGCTTCCTCCGCAGGACCGAGCTGACCGACGCCAGCGGAGagcgtCACGACGCCCTGTACGTGGTCGGTGCGCTGGAGGAAGCCATGGAGCTTAGAGGGATGCGTTACCACCCCATCGACATCGAGACCTCCGTCATCAGGACGCACAAGAGCATCACAGAGTGCGCCGTGTTCACGTGGACCaacctgctggtggtggtggtggagctgGATGGCTCGGAGCACGAGGCCCTGGACCTGGTCCCCCTGGTCACCAACGTGGTCCTGGAGGAGCACTACCTGATCGTGGGCGTGGTGGTGGTGGTCGACATCGGCGTCATCCCCATCAACTCCCGCGGCGAGAAGCAACGCATGCACCTGCGCGACGGCTTCCTGGCCGACCAGCTGGACCCCATCTACGTGGCCTACAACATGTAGCGCCCTTCCCCACCCCC

Function

symbol description
dip2c Orthologous to human DIP2C (disco interacting protein 2 homolog C).

NR:

description
disco-interacting protein 2 homolog C isoform X1

GO: NA

KEGG:

id description
K24909 DIP2C; disco-interacting protein 2 homolog C

RNA

RNA id representative length rna type GC content exon number start site end site
TU151740 False 486 TUCP 0.60 4 6577407 6600380
XM_039816134.1 True 4094 mRNA 0.60 33 6574796 6682272

Neighbor

gene id symbol gene type direction distance location
LOC120568642 dip2c coding upstream 2450 6372433 ~ 6572346 (+)
LOC120568706 larp4b coding upstream 223055 6302295 ~ 6351741 (+)
LOC120569021 NA coding upstream 324134 6191772 ~ 6250662 (+)
trnas-uga_21 NA coding upstream 333893 6240822 ~ 6240903 (+)
trnas-cga_6 NA coding upstream 334534 6240181 ~ 6240262 (+)
LOC120568554 NA coding downstream 62458 6744730 ~ 6745611 (+)
rnf2 rnf2 coding downstream 307229 6989501 ~ 7003033 (+)
LOC120568979 LOC102307644 coding downstream 706219 7388491 ~ 7466201 (+)
LOC120568864 LOC103365115 coding downstream 806201 7488473 ~ 7614340 (+)
LOC120568159 NA coding downstream 948383 7630655 ~ 7730468 (+)
G112514 NA non-coding upstream 43343 6531108 ~ 6531453 (+)
G112511 NA non-coding upstream 93882 6479712 ~ 6480914 (+)
G112510 NA non-coding upstream 100935 6473605 ~ 6473861 (+)
G112499 NA non-coding upstream 140056 6430061 ~ 6434740 (+)
G112487 NA non-coding upstream 165767 6408540 ~ 6409029 (+)
G112545 NA non-coding downstream 1825 6684097 ~ 6688456 (+)
G112547 NA non-coding downstream 12637 6694909 ~ 6698520 (+)
G112563 NA non-coding downstream 75332 6757604 ~ 6767081 (+)
G112560 NA non-coding downstream 117054 6799326 ~ 6804346 (+)
G112616 NA non-coding downstream 262243 6944515 ~ 6945102 (+)
G112400 NA other upstream 252806 6251390 ~ 6321990 (+)
LOC120568055 NA other upstream 558196 6003685 ~ 6016600 (+)
epdr1 epdr1,LOC104965688 other upstream 581085 5983857 ~ 5993711 (+)
LOC120568547 LOC106674584,LOC106676354,LOC106675207,LOC106675343,LOC106676464,LOC106676424,LOC106675739 other upstream 785379 5788223 ~ 5789417 (+)
dnaaf11 NA other upstream 1982449 4498994 ~ 4592347 (+)
G112562 NA other downstream 58829 6741101 ~ 6770912 (+)
LOC120568557 NA other downstream 190053 6872325 ~ 6873814 (+)
LOC120568216 NA other downstream 208715 6890987 ~ 6949130 (+)
G112655 NA other downstream 324970 7007242 ~ 7009157 (+)
G112670 NA other downstream 352755 7035027 ~ 7035700 (+)

Expression


Co-expression Network