G112560


Basic Information

Item Value
gene id G112560
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 6799326 ~ 6804346 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU151752
AAGTGTCAACAAGTTTAATTTTGATTGTGAGGGACTTTCTTTCCCATAAATCATATTATTTATCATTAATAAATCAATAGTCTTCTAAAAGCACAATGATATAAAAATGCAATGTTTAAGATTTACATTCACACAAGATAGCCTTTATCAATCATCTTTTGCATGACATTCATGGTGTCTTTATACAAATACCTGTGTTGGATAAAGGTGATACTCAGCatcatgtcagacaacattaaATATGAAATCACTCAACAAATCAACACTGTTTTATATATGGTCTTCAGTGTTTGTATACTCTCAACCACTTAGTCACATAGACCTCTTATGATACACTGAGTAACATGGTAacatcctgtttgtaatatatttggtaacacttttcTTAAGGCATACATCTGTATTGGGTTTTGTTTGATTTATGCATGGCAACTATCTATCTTATAAATTACTGTATTTTTGATTGCCTTGACAGGTTTgcagggtcttttaaagttatagCTGAAAAAATGACATATAATCAGATATATACCAAAACAAAATTACAGAATTCAATCCCTATAACTGCAACCAAAACtgtcaataaaaacatttaaaaattgcTTACAAAAACCGAATATCTAAGACTAGATGAAGCTTTTCCAATGTGTAGTTTTAGGCCTTACCTTTACATCCTCCAAAAAaacgtgcaaaaaaaaaaaaaaattcgatGTTATGCCTTTAAAACCACTATTTTTCCGAAAGGGTTTGTCATCCTACCTTTTCTCCACACAAATTCCAACCCTTTTGCCaaaatttcaaatttcaaatCATGATGATCCAAATTTCTAGGACATAAGGGTATATTAAAAcctcattttctgaactttgcTGTGGTACAAAGTCTTCTGCATCTGTAATGTGGTGTTCCACAAGGTTCAATCCTAGGCCCTCTATTATTCTCAATCTACATGCATGGAAACATCATCTGTCAGACTAATAAAAAACATCCACTGTATGTAGATGatacgtacgtacgtacgtacgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctttaaaaccaggagaTTCCAGGACCGTTAACTGCCTCTATGTGGCCTACATTTACCAACTTTGGCAAAACATGTATGATTTCCTCATTTTGCTTCCTAGATTTCATCAAACAAATTCTGGACAACAAAGAATTAATCTGGATGTGTATTTAGTCCAAAGGCAAAAGTGGGGTCTGGCTTGTAGTTAATGTTAATAAGTTAATGAGTGCAAGTTTGGTTTAGAGTCCTGTATTGAATTCATTTAAAAAGGacatacaaaaaaattaaagataGTACAAACTAAAGAAATGACGGCACTTATTCAGGACAGTAAGTGGGCTTTAGTATTTTGTTCACCAAAGATATTAACAGGAGGGAGTACCGTTTAGTGATAATAATCAGTAGTGTGAAAATGTGATTACTCAAAACAAACCCTTATTCTGTAAACCTTAAGTCAAGTGTCACCAGAATTTCTTGTCTTGTGGCAacaattaacattaacatttagACAGCACACTGCACAAAGCAAGCGGTTCCTTTTTTCTCATCTCTTAATAAAATTTACATTAGACATACGACACCACTATCAGCAAGATGGCATTGTTTGTCAGTGCCTTCCAAAACAACTCAACGTTTCAACATATACAATCGTTCTCTAAACTAACACCGCTAtagttaaaggtgcactatgagttcctgcgtggtttcagcgcaatttcatttttgtctcaaatcgtaggcatctctcctttaTACgttagctgcctgccccctaacaaaccacgttccagccaatcacatcAAACAAGATGGTTGAGGGAGGGGGTTAGTGCGCATACACATAATGGGGGGAATAGCGTGAGTTGTATCTGAGAGTAGCTGCTGCAAacatggtttgttgtattttggtgcacagcctgtgcccctagtgtttgacgtttacgacccctgtgttgtctccggagaccgggctttttcacagtgtattcagggggcaggcagctagcggatcaaggagagatgtctacgatttgagacaaaaattaaaTCGTGCTGAAACATTGCAGAAACTCAGTGTACCTTTAAGGTTTGTtcaggtttaggcacaaaatcTACTTGGCTAAGGATTACGGAACAACCGTGGTGATGGTTTAAAAGAAGCCAACATTGACTTGTGGTAGGAAACGGGAAATAAACAGCTGTTTCCCATGTTTATGTCCTACAGTTTGCTTTTCCCTCCTTTGCTCCCGATGGAAAAGAATCATTATTTGATAAGACCACTACAGTGCTTTGTCACTTGACCGCAAGGTGTTTCGGAGCATTTTATGAATCGACTGGGAGAACAGTCTCTTCAGCAATGTATGTGGCAAATAAAGCTAATATAGTAACTTACAAACACAACAGTATTTCAAGATTTTGCTTTGTAGCTAATCTCTCATTTTTCACTACCATCAACCACcataaaacacaatataatGTCTTCGACAGGGCTGTGCCACGGCTGCGTTGCAACTTGTTTCCTCAATGTAAAGTCTAGAATTCTGCTAACCATGAAGAGAAGAATGGCACTGTTTGTCTTACACATATTTCATAATTGTATAAATATTTAACTGCTTCATCTAACATACACAAGTCAAATTGCGTACAGTTCTAACCTCACTGCACACAGGTCCAGGAAAACCTGACTCAACATGATATTGCAACGATTACCTACTAGACCCGTTCTTTCTTGgctcacagataatatatacatataGTATATAGTGCGATCTCATCGTGATTgttatattttactatttaaaattttatatttctgtttgtctgtgattTAGTCATATTGAGAGCTGCTAAACTGTGTTTCgttgttgaaaacaatgacaataaagatataTCCTATTCTATAATACAAcatgaaaacactgaaaaaaatgttCTTTCTTGGCagcaaatacaaacacacccTCATTGGATGGATCAGGACAGCTTTAGGTccacttaaagtacattttgaaGGCTTGCAGAGATTTGTAAAGTTAAAACCAAAATCTGCTCTGAAACGATGTAGAGGTCCCACTCGTGTATTTCACCTCAACTTTGTGTTAAAATCATTTTGTAAAACTGTATTCGACCCAGGTCAACCTggagacagttttttttttttccaaggatCCCTCAGGTCCTCACAGCACTGTGGTCTCTGACTGCAGGATGGACTGGGTTCGGGAGTTGCGGTGAAACTGTACCATGTGCTCTGAACCGTTCCTGGAGGCGACGGTGCTGTTGAAGTGGTGATCTCTGCTCAGATGGCAGTTCAGACACATACTCCGCCACTTTCTCTTTAGCTCGCCTTGAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU151752 True 3390 lncRNA 0.37 2 6799326 6804346

Neighbor

gene id symbol gene type direction distance location
LOC120568554 NA coding upstream 53715 6744730 ~ 6745611 (+)
LOC120568642 dip2c coding upstream 226980 6372433 ~ 6572346 (+)
LOC120568706 larp4b coding upstream 447585 6302295 ~ 6351741 (+)
trnas-uga_21 NA coding upstream 558423 6240822 ~ 6240903 (+)
trnas-cga_6 NA coding upstream 559064 6240181 ~ 6240262 (+)
rnf2 rnf2 coding downstream 185155 6989501 ~ 7003033 (+)
LOC120568979 LOC102307644 coding downstream 584145 7388491 ~ 7466201 (+)
LOC120568864 LOC103365115 coding downstream 684127 7488473 ~ 7614340 (+)
LOC120568159 NA coding downstream 826309 7630655 ~ 7730468 (+)
LOC120567733 en2,LOC103370758,LOC106578606 coding downstream 988317 7792663 ~ 7799491 (+)
G112563 NA non-coding upstream 32245 6757604 ~ 6767081 (+)
G112547 NA non-coding upstream 100806 6694909 ~ 6698520 (+)
G112545 NA non-coding upstream 110870 6684097 ~ 6688456 (+)
G112549 NA non-coding upstream 180684 6618366 ~ 6618642 (+)
G112514 NA non-coding upstream 267873 6531108 ~ 6531453 (+)
G112616 NA non-coding downstream 140169 6944515 ~ 6945102 (+)
G112639 NA non-coding downstream 161988 6966334 ~ 6966666 (+)
G112651 NA non-coding downstream 199796 7004142 ~ 7005430 (+)
G112653 NA non-coding downstream 202400 7006746 ~ 7006964 (+)
G112657 LOC103370293,LOC103129992,LOC105922680 non-coding downstream 209356 7013702 ~ 7015856 (+)
G112562 NA other upstream 28414 6741101 ~ 6770912 (+)
LOC120568552 dip2c other upstream 117054 6574796 ~ 6682272 (+)
G112400 NA other upstream 477336 6251390 ~ 6321990 (+)
LOC120568055 NA other upstream 782726 6003685 ~ 6016600 (+)
epdr1 epdr1,LOC104965688 other upstream 805615 5983857 ~ 5993711 (+)
LOC120568557 NA other downstream 67979 6872325 ~ 6873814 (+)
LOC120568216 NA other downstream 86641 6890987 ~ 6949130 (+)
G112655 NA other downstream 202896 7007242 ~ 7009157 (+)
G112670 NA other downstream 230681 7035027 ~ 7035700 (+)
dnai4 NA other downstream 1081152 7885498 ~ 7903922 (+)

Expression


Co-expression Network