G112579


Basic Information

Item Value
gene id G112579
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 6731759 ~ 6869470 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU151788
ggtcgaaaagttcaagggggccgaatactttcgcaaggcactgtatatattatctgtgagcCAAGAAAGAACGGGTCTAGTAGGTAATCGTTGCAATATCATGTTGAGTCAGGTTTTCCTGGACCTGTGTGCAGTGAGGTTAGAACTGTACGCAATTTGACTTGTGTATGTTAGATGAAGCAGTTAAATATTTATACAATTATGAAATATGTGTAAGACAAACAGTGCCATTCTTCTCTTCATGGTTAGCAGAATTCTAGACTTTACATTGAGGAAACAAGTTGCAACGCAGCCGTGGCACAGCCCTGTCGAAGACattatattgtgttttatgGTGGTTGATGGTAGTGAAAAATGAGAGATTAGCTACAAAGCAAAATCTTGAAATACTGTTGTGTTTGTAAGTTACTATATTAGCTTTATTTGCCACATACATTGCTGAAGAGACTGTTCTCCCAGTCGATTCATAAAATGCTCCGAAACACCTTGCGGTCAAGTGACAAAGCACTGTAGTGGTCTTATCAAATAATGATTCTTTTCCATCGGGAGCAAAGGAGGGAAAAGCAAACTGTAGGACATAAACATGGGAAACAGCTGTTTATTTCCCGTTTCCTACCACAAGTCAATGTTGGCTTCTTTTAAACCATCACCACGGTTGTTCCGTAATCCTTAGCCAAGTAgattttgtgcctaaacctgaACAAACCTTAAAGGTACACTGAGTTTCTGCAATGTTTCAGCACGAtttaatttttgtctcaaatcgtagacatctctccttgatccgctagctgcctgccccctgaatacactgtgaaaaagcccggtctccggagacaacacaggggtcgtaaacgtcaaacactaggggcacaggctgtgcaccaaaatacaacaaaccatgtTTGCAGCAGCTACTCTCAGATACAACTCACGCTATTCCCCCCATTATGTGTATGCGCACTAACCCCCTCCCTCAACCATCTTGTTTgatgtgattggctggaacgtggtttgttagggggcaggcagctaacGTAtaaaggagagatgcctacgatttgagacaaaaatgaaattgcgctgaaaccacgcaggaactcatagtgcacctttaactaTAGCGGTGTTAGTTTAGAGAACGATTGTATATGTTGAAACGTTGAGTTGTTTTGGAAGGCACTGACAAACAATGCCATCTTGCTGATAGTGGTGTCGTATGTCTAATGTAAATTTTATTAAGAGATGAGAAAAAAGGAACCGCTTGCTTTGTGCAGTGTGCTGTctaaatgttaatgttaattgtTGCCACAAGACAAGAAATTCTGGTGACACTTGACTTAAGGTTTACAGAATAAGGGTTTGTTTTGAGTAATCACATTTTCACACTACTGATTATTATCACTAAACGGTACTCCCTCCTGTTAATATCTTTGGTGAACAAAATACTAAAGCCCACTTACTGTCCTGAATAAGTGCCGTCATTTCTTTAGTTTGTACtatctttaatttttttgtatgtCCTTTTTAAATGAATTCAATACAGGACTCTAAACCAAACTTGCACTCATTAACTTATTAACATTAACTACAAGCCAGACCCCACTTTTGCCTTTGGACTAAATACACATCCAGATTAATTCTTTGTTGTCCAGAATTTGTTTGATGAAATCTAGGAAGCAAAATGAGGAAATCATACATGTTTTGCCAAAGTTGGTAAATGTAGGCCACATAGAGGCAGTTAACGGTCCTGGAAtctcctggttttaaagacacacacacacacacacacacacacacacacacacacacacacacacacaca
>TU151790
aggagggaaaaaaaacTGTAGGACATAAACATGGGAAACAGCTGTTTATTTCCCGTTTCCTACCACAAGTCAATGTTGGCTTCTTTTAAACCATCACCACGGTTGTTCCGTAATCCTTAGCCAAGTAgattttgtgcctaaacctgaACAAACCTTAAAGGTACACTGAGTTTCTGCAATGTTTCAGCACGAtttaatttttgtctcaaatcgtagacatctctccttgatccgctagctgcctgccccctgaatacactgtgaaaaagcccggtctccggagacaacacaggggtcgtaaacgtcaaacactaggggcacaggctgtgcaccaaaatacaacaaaccatgtTTGCAGCAGCTACTCTCAGATACAACTCACGCTATTCCCCCCATTATGTGTATGCGCACTAACCCCCTCCCTCAACCATCTTGTTTgatgtgattggctggaacgtggtttgttagggggcaggcagctaacGTAtaaaggagagatgcctacgatttgagacaaaaatgaaattgcgctgaaaccacgcaggaactcatagtgcacctttaactaTAGCGGTGTTAGTTTAGAGAACGATTGTATATGTTGAAACGTTGAGTTGTTTTGGAAGGCACTGACAAACAATGCCATCTTGCTGATAGTGGTGTCGTATGTCTAATGTAAATTTTATTAAGAGATGAGAAAAAAGGAACCGCTTGCTTTGTGCAGTGTGCTGTctaaatgttaatgttaattgtTGCCACAAGACAAGAAATTCTGGTGACACTTGACTTAAGGTTTACAGAATAAGGGTTTGTTTTGAGTAATCACATTTTCACACTACTGATTATTATCACTAAACGGTACTCCCTCCTGTTAATATCTTTGGTGAACAAAATACTAAAGCCCACTTACTGTCCTGAATAAGTGCCGTCATTTCTTTAGTTTGTACtatctttaatttttttgtatgtCCTTTTTAAATGAATTCAATACAGGACTCTAAACCAAACTTGCACTCATTAACTTATTAACATTAACTACAAGCCAGACCCCACTTTTGCCTTTGGACTAAATACACATCCAGATTAATTCTTTGTTGTCCAGAATTTGTTTGATGAAATCTAGGAAGCAAAATGAGGAAATCATACATGTTTTGCCAAAGTTGGTAAATGTAGGCCACATAGAGGCAGTTAACGGTCCTGGAAtctcctggttttaaagattacacacacacacacacacacacacaca

Function

GO:

id name namespace
GO:0005509 calcium ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU151788 True 1825 lncRNA 0.40 2 6783945 6802154
TU151790 False 1249 lncRNA 0.40 3 6731759 6869470

Neighbor

gene id symbol gene type direction distance location
gtpbp4 gtpbp4 coding downstream 431788 6284160 ~ 6299971 (-)
LOC120569024 wdr37,LOC102795438 coding downstream 448261 6256300 ~ 6283498 (-)
trnas-uga_20 NA coding downstream 503975 6227703 ~ 6227784 (-)
trnas-uga_19 NA coding downstream 505013 6226665 ~ 6226746 (-)
trnas-uga_18 NA coding downstream 510662 6221016 ~ 6221097 (-)
LOC120568998 LOC103370293,LOC103129992,LOC103396629 coding upstream 138651 7008121 ~ 7015870 (-)
LOC120568987 LOC104934800,LOC103132244,LOC103479200,LOC103375024 coding upstream 148924 7018394 ~ 7028668 (-)
c11h5orf22 LOC104934799,LOC103375412 coding upstream 160615 7030085 ~ 7044538 (-)
LOC120568977 NA coding upstream 361331 7230801 ~ 7232421 (-)
LOC120567743 NA coding upstream 752644 7622114 ~ 7624108 (-)
G112590 NA non-coding downstream 4992 6726411 ~ 6726767 (-)
G112578 NA non-coding downstream 36258 6691784 ~ 6695501 (-)
G112582 LOC106568825,LOC106599479 non-coding downstream 49058 6681961 ~ 6682701 (-)
G112587 NA non-coding downstream 61033 6670445 ~ 6670726 (-)
G112586 NA non-coding downstream 62420 6669113 ~ 6669339 (-)
G112617 NA non-coding upstream 5195 6874665 ~ 6949132 (-)
G112648 LOC106604074 non-coding upstream 125588 6995058 ~ 6998925 (-)
G112652 NA non-coding upstream 134694 7004164 ~ 7005382 (-)
G112654 NA non-coding upstream 137202 7006672 ~ 7006980 (-)
G112683 NA non-coding upstream 188977 7058447 ~ 7058835 (-)
LOC120567959 NA other downstream 552873 6172281 ~ 6178886 (-)
G112328 NA other downstream 879312 5793163 ~ 5852447 (-)
LOC120568546 NA other downstream 985678 5723733 ~ 5746081 (-)
G112233 NA other downstream 1063072 5664004 ~ 5668687 (-)
G112046 NA other downstream 2447676 4267538 ~ 4284083 (-)
si:ch211-267e7.3 LOC103370300 other upstream 86970 6956440 ~ 6990122 (-)
cdh6 LOC103366829,LOC104926815 other upstream 207139 7076609 ~ 7163670 (-)
trnak-uuu_16 NA other upstream 1617997 8487467 ~ 8487539 (-)
G113070 NA other upstream 1910982 8780452 ~ 8790042 (-)
chd7 chd7,LOC103370133,LOC102782711 other upstream 2244914 9114384 ~ 9194872 (-)

Expression


Co-expression Network