G112657 (LOC103370293,LOC103129992,LOC105922680)


Basic Information

Item Value
gene id G112657
gene name LOC103370293,LOC103129992,LOC105922680
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 7013702 ~ 7015856 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU151898
ttgggaaaaatctgaagttggaaaaaaggtaaatacattgcaatatatcgcagaatattttgcaatatgtttaaaatcgcaataatatcgtatcgtgacataagtatcgggatgatatcgtatcgtgaggcctctggtgattcccacccttaatattttcctcatatatcgtgcagccctacgaGGAGGGTCAGGACTCAAAGTGGAGAGGCACTTTCTCCATCGTCCCATTCTGAGAGTGTTACTGCACTTAGTCAAGACCATTACATACCTTGGCGACCTGGTTCTTGGTGTTGATTGGAGGATTCTTTAGCACTGCTTGGAGAGCTGCATTCATGTTCCCCTGTCTGAGCAAAGCGTCTACTTCTGCTTCGTCCGGACCTCCCTGgttctctcctccttcttcctcgTCCACAAACTTATTCTCGTCGTATTCATCAACGTCTACTTTCCTAAACCGGTCGGAAAGTgagtttttagacatttttggaCACGATAGTAACGATTGTTCAACGCAAGGCGGCCGTTATGGACAGCAGACACTAGCAACCGTGCTGTCCAGTAGTCAGTTTTCCACCAGCGCTGCCACTTCCTCACTTCTTC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU151898 True 603 lncRNA 0.45 2 7013702 7015856

Neighbor

gene id symbol gene type direction distance location
rnf2 rnf2 coding upstream 10669 6989501 ~ 7003033 (+)
LOC120568554 NA coding upstream 268091 6744730 ~ 6745611 (+)
LOC120568642 dip2c coding upstream 441356 6372433 ~ 6572346 (+)
LOC120568706 larp4b coding upstream 661961 6302295 ~ 6351741 (+)
trnas-uga_21 NA coding upstream 772799 6240822 ~ 6240903 (+)
LOC120568979 LOC102307644 coding downstream 372635 7388491 ~ 7466201 (+)
LOC120568864 LOC103365115 coding downstream 472617 7488473 ~ 7614340 (+)
LOC120568159 NA coding downstream 614799 7630655 ~ 7730468 (+)
LOC120567733 en2,LOC103370758,LOC106578606 coding downstream 776807 7792663 ~ 7799491 (+)
cdc14aa LOC104931871,LOC103370748,LOC100703039,LOC108411489 coding downstream 1028148 8044004 ~ 8062100 (+)
G112653 NA non-coding upstream 6738 7006746 ~ 7006964 (+)
G112651 NA non-coding upstream 8272 7004142 ~ 7005430 (+)
G112639 NA non-coding upstream 47036 6966334 ~ 6966666 (+)
G112616 NA non-coding upstream 68600 6944515 ~ 6945102 (+)
G112560 NA non-coding upstream 209356 6799326 ~ 6804346 (+)
G112674 NA non-coding downstream 42571 7058427 ~ 7058752 (+)
G112675 LOC104926815,LOC103366829 non-coding downstream 60753 7076609 ~ 7081588 (+)
G112686 NA non-coding downstream 150306 7166162 ~ 7166365 (+)
G112743 NA non-coding downstream 718869 7734725 ~ 7735259 (+)
G112747 NA non-coding downstream 724025 7739881 ~ 7740113 (+)
G112655 NA other upstream 4545 7007242 ~ 7009157 (+)
LOC120568216 NA other upstream 64572 6890987 ~ 6949130 (+)
LOC120568557 NA other upstream 139888 6872325 ~ 6873814 (+)
G112562 NA other upstream 242790 6741101 ~ 6770912 (+)
LOC120568552 dip2c other upstream 331430 6574796 ~ 6682272 (+)
G112670 NA other downstream 19171 7035027 ~ 7035700 (+)
dnai4 NA other downstream 869642 7885498 ~ 7903922 (+)
G112932 NA other downstream 1293994 8309850 ~ 8313076 (+)
LOC120568257 LOC102194642,LOC101465810,LOC102289180,LOC103366014,LOC103129983,LOC107384349,LOC103396642,LOC108246689 other downstream 1391073 8406929 ~ 8510408 (+)
atg10 atg10 other downstream 1692805 8708661 ~ 8715271 (+)

Expression


Co-expression Network