G112738


Basic Information

Item Value
gene id G112738
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 7710610 ~ 7734376 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU151996
TATTATCAGTTCTCCAAACTCACAGGAAGCTCAAGTGTTTGACAGCCAACAGCTTACAGAACCGAGGGGAACACAGTTATTTACAGCTGTAAACTCAACAGGTTTCAGACTGACAGAGAACGTGTTAAAGGCATGCAAAGGGTTCAGACAACAAGGAAATAAATCCAACCACTTGCATACAAGTTGGAGGCTGATATTAAACTGTGCCTTTATTAGGTTTGAATAATAcacattcaaaatgttttttttttttgtatacacaGAACACAGTAAATGGTCCGTACAGTGTGTTTCAAATCACAGTTTTCGAACTCAAACACATTTCTGACgtacagaaaagaaaaatctgtGAAAGAGCGGGATGTCATTTTAGGAAATATAATGGCAGTCTTAACCCAGAGTCTGACGAGAAGATGAATCAATCAGTCCATCTCAATGTGTTTCTCTCTCCGGGATGCGTTTACTGTCACCTGTAAGCCCAGCTTCATCAAAACAGCCACAACTGTCTTACTTTTTTGATTCTTGGACACAAAAatagaataaagaaaaaagaaaaagccgtGCATTTCAGTAGCAGTAGCGTCGGACCTGTTTCCCTGCAGTCAtacgttttagtttttatttacaaTAGATGCAGTTGGTATGCAGAAGTCAGTATAGGTTTTTTCcctaacataaaaacatctacaACGTCTCATCTTCCCTCTACTCACCAGGGTTATCTCATTCTGTTTCTATgccaattttgtttttttttaatgaatatcGTCACTGTCTGGTGAAAACCTTGGATGTCCAAAGCAATACTTttttaggaaatgaaaataaaatgctaaCTTGAAAACATTTATTGAGCTATTCGGGTCAGACAAAGGCAGACAGaaactgtttaaatatttgtaagaCAGGCGTAAAGGGTGACCAACAGCATTgattcattctttttattttttattttatttgactaAATAACGAGATACAAGGTTAGCGACGATATGTAAACCGGAGGCGAGACATTTGGTGAAAATTGGTGATAAATTGCAGGTGAAAAACCATTGGAGGATTATATTCACTGGGAATGGTTTTCTCTCCGGTGAACAAAGAgctgttctttatttttatttttttactttgacacCAGAGGTGGGTCATGTCCTGGGGTCCTGGGAGAAAAGCattggtttttttttcattaggcCTCCACAACAGATACCTGTAGTGCTACTTTTTTTTAGGTTCAGGGACGGCACTGCGTAGCATTTGTCTGCGTTAACAGCTCCTCCTAGTCCCACACCAAACCCAAGGGGACCGTGCTTTCTCCGTGTCTGCTCCCAGGCTTCGGAACAGCCTCCGGTCCCATATTAAAGCATGTTCTACcacccttttttccccccccactTACTTTTAGCAACGTCTGAGGCTGCCTGGCTTCTGTCAAGCTACCTCCTGATCTGTCTTTCTATTCCCTATACTGCTTCAAAAGCCATTGCTGATGTAATTCACTCTTCTGACGTGCTTCTTTGTTGACGTTGTTTTACGCTgcaatttgttttgtattacattttgtggCGTTTTGTTGGTTATGTACGTCTAATTAGCCTGCTGTTAGTTGTCTATGTGTCCAGGCATACTCTACCCCATCTGCCCTGGTTCTGGTTGGAAAGCACTTTTGGGTCAGCTTAtgctgttttaaatgtgctttataaataaagatgacttgacttgactttttgGGGATGTTGGAATGggtattttttcactttttaaagggACCTAAGCTAGCAGTTTGTCAGATTCTAGCAGATTGTAAGCTTGGTTAAAGATGCCCGGAACATTCCTCTTTACTGGTATATTCATCTTCTCATCTGACTCGGACTTGCGGATTTGTTCCTTTATCCTTGATGGATTTAGCCTCACAGACAGTAAAGCTGTCTGTCATAATGAACTTACTCGAAAAAGACTTCAAAAACTTCAAGCAACTCACTACAAATGGAAAGGGCTCTGCATATGCACAATAAACAACAGCTATGTTCAAAGAAGCTATATATGTCTAATATGCCTGTATATGTTGCTATATTATACTTCATACTACTATACATAAAAAGTCTACACGGATAGATTTGAACTTTACAGAATGTATCTTTAAACAGGTTAGTCTGTACAGAACTGTCTTTGGGTAAACTCTGCATATTAATCATCCCAACCTCTACTTTCCACAGAAATTTATTCAACAGTGTTAAATGAaagcacacatactgtatctcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacccacacacacacacacacacacacacacacacacacacacacacacacacac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU151996 True 2394 lncRNA 0.39 2 7710610 7734376

Neighbor

gene id symbol gene type direction distance location
LOC120567743 NA coding downstream 86502 7622114 ~ 7624108 (-)
LOC120568977 NA coding downstream 478189 7230801 ~ 7232421 (-)
c11h5orf22 LOC104934799,LOC103375412 coding downstream 666072 7030085 ~ 7044538 (-)
LOC120568987 LOC104934800,LOC103132244,LOC103479200,LOC103375024 coding downstream 681942 7018394 ~ 7028668 (-)
LOC120568998 LOC103370293,LOC103129992,LOC103396629 coding downstream 694740 7008121 ~ 7015870 (-)
paxip1 paxip1 coding upstream 7308 7741684 ~ 7767836 (-)
cnpy1 LOC103363935,LOC102314352 coding upstream 83371 7817747 ~ 7836946 (-)
shhb LOC104930803 coding upstream 132018 7866394 ~ 7870117 (-)
asph asph,LOC103370744,LOC108250906 coding upstream 169829 7904205 ~ 7938777 (-)
ttpa ttpa coding upstream 217636 7952012 ~ 7961067 (-)
G112716 NA non-coding downstream 100376 7608900 ~ 7610234 (-)
G112683 NA non-coding downstream 651775 7058447 ~ 7058835 (-)
G112654 NA non-coding downstream 703630 7006672 ~ 7006980 (-)
G112652 NA non-coding downstream 705228 7004164 ~ 7005382 (-)
G112648 LOC106604074 non-coding downstream 711685 6995058 ~ 6998925 (-)
G112764 NA non-coding upstream 67964 7802340 ~ 7802552 (-)
G112778 NA non-coding upstream 121296 7855672 ~ 7855889 (-)
G112779 NA non-coding upstream 123474 7857850 ~ 7858075 (-)
G112871 NA non-coding upstream 167204 7901580 ~ 7903890 (-)
G112887 NA non-coding upstream 189726 7924102 ~ 7926192 (-)
cdh6 LOC103366829,LOC104926815 other downstream 546940 7076609 ~ 7163670 (-)
si:ch211-267e7.3 LOC103370300 other downstream 720488 6956440 ~ 6990122 (-)
zmynd11 zmynd11 other downstream 974098 6695610 ~ 6736512 (-)
LOC120567959 NA other downstream 1531724 6172281 ~ 6178886 (-)
G112328 NA other downstream 1858163 5793163 ~ 5852447 (-)
trnak-uuu_16 NA other upstream 753091 8487467 ~ 8487539 (-)
G113070 NA other upstream 1046076 8780452 ~ 8790042 (-)
chd7 chd7,LOC103370133,LOC102782711 other upstream 1380008 9114384 ~ 9194872 (-)
LOC120568397 NA other upstream 1666411 9400787 ~ 9510497 (-)
brinp2 brinp2,LOC103369811 other upstream 2306310 10040686 ~ 10267078 (-)

Expression


Co-expression Network