G112798


Basic Information

Item Value
gene id G112798
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 7969510 ~ 7970134 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU152065
GCATACATGTAACAATAAGAAAGAATGACGTTAAATAAATGTAAGCACACAGTAAGAGACTACAGTGGTcactacaaaaaaataggttaTTTCTCAAATGAACTGACATTGAAGATTGAAAACCTTCACAATAGAGAGAGTTCAGTTCACTCAGCTCTGACGGATCTAAATCAAACTTGGCAAAATAAGCCTGTCCAATACAAAATCCTTGGAAATAAAAGTATAGTTAACaaattatttgttcttttaaCTGACATGTTTAAATGGCTAAACTGGAAACAGCTCTGCTATCCTTGCTAGCTAGAGCGCTGACTGAGTTGAAAATAGTGCATAATGTCATGTTGGAGAGACCCAAATGAAACGGGCTCCAGTGTTTCAACATCGCATATCTCAGTCCTCAAATGTCCGTTCTACAGTATATCTTAGCAAGCTCCAGAAAGCGTCActaaaagaagatgatgaaaacTAAAACTCTACTAGAACTAAAATGCCATGCAGCTTCCTCAAGTCTGAGCGACAGAGACTGCTTTCACAATgacaaagaaaaggagaaagaaaatgtgtttggcATTAAAGTGCACATAATCATTGAGGGACTTATTGCTCACTGGCACGTGACTTCAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU152065 True 625 lncRNA 0.37 1 7969510 7970134

Neighbor

gene id symbol gene type direction distance location
LOC120567733 en2,LOC103370758,LOC106578606 coding upstream 170019 7792663 ~ 7799491 (+)
LOC120568159 NA coding upstream 239042 7630655 ~ 7730468 (+)
LOC120568864 LOC103365115 coding upstream 355170 7488473 ~ 7614340 (+)
LOC120568979 LOC102307644 coding upstream 503309 7388491 ~ 7466201 (+)
rnf2 rnf2 coding upstream 966477 6989501 ~ 7003033 (+)
cdc14aa LOC104931871,LOC103370748,LOC100703039,LOC108411489 coding downstream 73870 8044004 ~ 8062100 (+)
blvra blvra coding downstream 194272 8164406 ~ 8175954 (+)
tmem68 tmem68 coding downstream 232090 8202224 ~ 8212592 (+)
gad3 LOC104936027,LOC102300090,LOC102207797,LOC101470357,LOC101067284 coding downstream 378225 8348359 ~ 8373438 (+)
LOC120568256 NA coding downstream 550033 8520167 ~ 8528904 (+)
G112797 NA non-coding upstream 2750 7964447 ~ 7966760 (+)
G112796 NA non-coding upstream 14834 7950270 ~ 7954676 (+)
G112777 NA non-coding upstream 113525 7855699 ~ 7855985 (+)
G112775 NA non-coding upstream 132660 7835603 ~ 7836850 (+)
G112749 NA non-coding upstream 226209 7741695 ~ 7743301 (+)
G112809 NA non-coding downstream 7570 7977704 ~ 7978013 (+)
G112811 NA non-coding downstream 15159 7985293 ~ 7985508 (+)
G112812 NA non-coding downstream 16043 7986177 ~ 7986381 (+)
G112813 NA non-coding downstream 27027 7997161 ~ 7997544 (+)
G112847 NA non-coding downstream 220443 8190577 ~ 8191459 (+)
dnai4 NA other upstream 65588 7885498 ~ 7903922 (+)
G112670 NA other upstream 933810 7035027 ~ 7035700 (+)
G112655 NA other upstream 960353 7007242 ~ 7009157 (+)
LOC120568216 NA other upstream 1020380 6890987 ~ 6949130 (+)
LOC120568557 NA other upstream 1095696 6872325 ~ 6873814 (+)
G112932 NA other downstream 339716 8309850 ~ 8313076 (+)
LOC120568257 LOC102194642,LOC101465810,LOC102289180,LOC103366014,LOC103129983,LOC107384349,LOC103396642,LOC108246689 other downstream 436795 8406929 ~ 8510408 (+)
atg10 atg10 other downstream 738527 8708661 ~ 8715271 (+)
LOC120568415 LOC103370799,LOC104931865,LOC101476899,LOC102794599,LOC102300092 other downstream 819075 8789209 ~ 8809459 (+)
LOC120568881 mfsd12,LOC104931866 other downstream 842763 8812897 ~ 8825811 (+)

Expression


Co-expression Network