G112876


Basic Information

Item Value
gene id G112876
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 7967433 ~ 7969334 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU152161
aaatacaaaacaagcaATAGAGAGGTTTTAAGTGGTACCTATCTGCTCAGTGGTAACTTAGTTTGGCTGACAGGATGCTGGTTGGCTGAGGCAGCACGTCTTGCACTGCTTGAATTTCCTATATGATAGTTTTACAGTAGGAATAATCACACTTCCTAGTTCCTCCCCACCCCAACACATCATGGGTGCCCTAGTTCAAACAGACGATTTTGCGATTCCAATTCATTAGAATGGAATTGACCTGGTTAGTGAAGTTCAACTTGTGTAAACTTTCGTGCCCGATATTTGCTTACCCTAACCCAAGCTTGTAAGCTTGGAGAGCTTTtccaataactttttttttattgaaataaatgTTGTACTATGGTGAGCACAATGCAGAGAGGTGTAAGCTAGGGATCGACcaatactgttttttcaaggccgataaagattattaatagttaatgaaaccgataggCGATATTTGTAACCGATATGcatatacagtgaaaatgaaaatccttAAGTAAAAATGAAGGtctctgcagctgtctgatttcAGTTTGTCTTGCGTTTGGCAGTAAAATAAGCAGCTGAGTTTTCTACTTTGCCTTTTTCTTCTGCACACTCAGGGTTTGTCTCTCTTTTACACACCCACATGGGCATATATGGGTATATCTTTTTAATCGGTTAACATTTCTACACAAGCTTTGAAATGACGCCGTTGCTTTCACTACTTTcagttttctgaaatgtccaTGCAGCAGACACAATCATTCAAGAAAAAGCCCAGTTTAGTTTTGTGATCTTAAATGCAGTGCTTTTGTtcagggcttttattttgttttcatgttgaCCGTTTACTTTTAACAAAGATTATTATAAAGCCATTCCTGTGTTTAAAAACAGCATGTTCCACAGTGGCAGGAGCTTTGAACTCAGGACATGTGAGCGCATTTGCACCTTTAGCCTTCCGATTCACAAGCAACACGAAAGCCTCTGGACTTCAGCTCCGTCTTGTTGTTCTCAGCCCTCATTTGTACGAATGCACCAgttgaaaccccccccccccgcccccccactCCACGAATGTATTTGTTTCTGACATGAATGACACCAAAGCTTAGCAAAGGAACCTCTAGAAAATGATTGATTTcagttctttttatttatttttttatttttttgttaaaatcgGTACAATGCCAAATAGTATGATCTCTCAAAACGTAACGTGTTCCTTTAATCCCAGAGCCGAGGCTGATGGTGTTTTATGTTTAACTTATGATTCTCAATCTCTGAACATTTGAAGGCTTCAGCTGCCGGCAGGCTGACCGTGTTGTTTTATAATCGTTaatcctattttttttatttttctacattcCAGACAATGactcaggctacatttacattgctacgtcttttaaaaatgaatatgttTTGCTACGTTTAGACCTcgcattcacactgctctgacgtttcagagcccctaaaccagagacatttaaaaaaaaaaaaaaaaacgtctgactccgttttggtttgaaatcGGGGGTTGTGTTGCAatctcaacggccgcaaacggagTCCTTTGGCAACACCGACGCCAACATTTCGCCGCCTGATAGGGTCTTATCAGTCATGACATCTTtggttctctgagactaagctaccAACGTTAACCATGGCAGCTGCCAGCAACGGGTGGAGTCTACACGCTGCGTCCTGTTCACCCTGGCGGCGCACGCGCATGCCCAGTGtaccagaatgttgatgagatatgcggttttgggcgtgttagtttaaacagagattagttcttctactggagctaaaaaaaCGTGTGTGCAAGGAAATCGCTAttggctcaaaactctgcttaaaaaaacaaaaacgcagCGATGTAAATGTAGTCTCACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU152161 True 1902 lncRNA 0.41 1 7967433 7969334

Neighbor

gene id symbol gene type direction distance location
ttpa ttpa coding downstream 6366 7952012 ~ 7961067 (-)
asph asph,LOC103370744,LOC108250906 coding downstream 28656 7904205 ~ 7938777 (-)
shhb LOC104930803 coding downstream 97316 7866394 ~ 7870117 (-)
cnpy1 LOC103363935,LOC102314352 coding downstream 130487 7817747 ~ 7836946 (-)
paxip1 paxip1 coding downstream 199597 7741684 ~ 7767836 (-)
LOC120568123 xpr1,LOC101080083,LOC103396762 coding upstream 2615 7971949 ~ 8022906 (-)
tmem70 NA coding upstream 93749 8063083 ~ 8067449 (-)
LOC120567605 LOC101471767,LOC104938020,LOC102193348,LOC100709377,LOC103374359 coding upstream 109962 8079296 ~ 8085926 (-)
cntnap2b LOC101476225,LOC102211470 coding upstream 134067 8103401 ~ 8136557 (-)
ccr12a LOC101473018,LOC104945947 coding upstream 170898 8140232 ~ 8146892 (-)
G112877 NA non-coding downstream 1128 7964439 ~ 7966305 (-)
G112887 NA non-coding downstream 41241 7924102 ~ 7926192 (-)
G112871 NA non-coding downstream 63543 7901580 ~ 7903890 (-)
G112779 NA non-coding downstream 109358 7857850 ~ 7858075 (-)
G112778 NA non-coding downstream 111544 7855672 ~ 7855889 (-)
G112902 NA non-coding upstream 74776 8044110 ~ 8045481 (-)
G112903 LOC104931871 non-coding upstream 87268 8056602 ~ 8060033 (-)
G112897 NA non-coding upstream 170116 8139450 ~ 8192584 (-)
G112922 NA non-coding upstream 241493 8210827 ~ 8211057 (-)
G112924 NA non-coding upstream 242786 8212120 ~ 8212771 (-)
cdh6 LOC103366829,LOC104926815 other downstream 803763 7076609 ~ 7163670 (-)
si:ch211-267e7.3 LOC103370300 other downstream 977311 6956440 ~ 6990122 (-)
zmynd11 zmynd11 other downstream 1230921 6695610 ~ 6736512 (-)
LOC120567959 NA other downstream 1788547 6172281 ~ 6178886 (-)
G112328 NA other downstream 2114986 5793163 ~ 5852447 (-)
trnak-uuu_16 NA other upstream 518133 8487467 ~ 8487539 (-)
G113070 NA other upstream 811118 8780452 ~ 8790042 (-)
chd7 chd7,LOC103370133,LOC102782711 other upstream 1145050 9114384 ~ 9194872 (-)
LOC120568397 NA other upstream 1431453 9400787 ~ 9510497 (-)
brinp2 brinp2,LOC103369811 other upstream 2071352 10040686 ~ 10267078 (-)

Expression


Co-expression Network