LOC120567758


Basic Information

Item Value
gene id LOC120567758
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 10887007 ~ 10888952 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU153067
ctgtggtacACGTTCGGTGAAGGAACCAGACTGGAATTTGGAAGTGATGTCCGTCCCACCCTGACAGTGCTGCCCCCCTCCAGTGAGGAGCTGCTGCAGGGGAAGGCCACGCTCATGTGCCTGGCCAACAAGGGCTTCCCCTCAGACTGGAGTCTGGCCTGGAAGGTGGACtgcggcggcagcagcagcagcagctgggaggagagcaggagcCCCGGGGTGATGCAGAAGGATGGCCACTACAGCTGGAGCCGCACCCTGAGGCTCCCTGCAGACCAGTGGAGGAAGGTGGGCTCTGTGACCTGTGAGGCCACCCAGGGCTCCCAGACTCCAgtctcagagacactgaggagggACCAGTGTTCCCAGTCCTGACCTGACTCACTGGGACTCTGCTACTGGTTTCACTCTGCTACTGCTCTCAGtctgcactctctctctctctctctctctctctctctctctctctctctctctctctctctctcttgtcagACTTAAAAGATTGAAATAGTGATATTTTCTTGCTCATAATGACGCCGACAGGCTTTTGATTTAATAAAGATTGTTTTCTTCAAACTGTTTCAgagtatattattatttaaacagactcttgtttttttaacatctaCAAGTGTTTAAGTGATAGAGTATAATGAAG
>unassigned_transcript_557
GGTAAACTGGTAATGTGTTtggtgagtttgtttgtgtcaaagtcagagagccgtgtctctctacagtgagaggtttttgtacggCGGCTCAGtgactttgtatcactgtggtacACGTTCGGTGAAGGAACCAGACTGGAATTTGGAAGTGATGTCCGTCCCACCCTGACAGTGCTGCCCCCCTCCAGTGAGGAGCTGCTGCAGGGGAAGGCCACGCTCATGTGCCTGGCCAACAAGGGCTTCCCCTCAGACTGGAGTCTGGCCTGGAAGGTGGACtgcggcggcagcagcagcagcagctgggaggagagcaggagcCCCGGGGTGATGCAGAAGGATGGCCACTACAGCTGGAGCCGCACCCTGAGGCTCCCTGCAGACCAGTGGAGGAAGGTGGGCTCTGTGACCTGTGAGGCCACCCAGGGCTCCCAGACTCCAgtctcagagacactgaggagggACCAGTGTTCCCAGTCCTGACCTGACTCACTGGGACTCTGCTACTGGTTTCACTCTGCTACTGCTCTCAGtctgcactctctctctctctctctctctctctctctctctctctctctctctctctctctctcttgtcagACTTAAAAGATTGAAATAGTGATATTTTCTTGCTCATAATGACGCCGACAGGCTTTTGATTTAATAAAGATTGTTTTCTTCAAA

Function

GO: NA

KEGG:

id description
ko05140 Leishmaniasis

RNA

RNA id representative length rna type GC content exon number start site end site
TU153067 False 661 TUCP 0.52 2 10887007 10888847
unassigned_transcript_557 True 684 C_gene_segment 0.54 2 10887089 10888952

Neighbor

gene id symbol gene type direction distance location
pappa2 pappa2 coding downstream 25399 10755896 ~ 10861608 (-)
map4l LOC103364124,LOC102200499,LOC102297845,LOC108238623,LOC107384193,LOC102781692,LOC104942656 coding downstream 1098787 9674884 ~ 9788220 (-)
fitm1l LOC103375111,LOC104934817,LOC102294302,LOC101483423 coding downstream 1323266 9551992 ~ 9563741 (-)
ankrd45 NA coding downstream 1349445 9534265 ~ 9537562 (-)
cryz cryz coding downstream 1528474 9352318 ~ 9358533 (-)
col15a1b NA coding upstream 33616 10922568 ~ 10996589 (-)
LOC120568748 LOC103355153,LOC104929170 coding upstream 117927 11006879 ~ 11043741 (-)
LOC120567858 LOC103355152 coding upstream 166886 11055838 ~ 11094619 (-)
ctnnd2b ctnnd2,LOC101475998,LOC102313221,LOC100711149,LOC102780722 coding upstream 262475 11151427 ~ 11321003 (-)
zswim5 zswim5 coding upstream 501932 11390884 ~ 11462612 (-)
LOC120569033 NA non-coding downstream 475677 10410527 ~ 10411330 (-)
LOC120569031 NA non-coding downstream 508206 10372699 ~ 10378801 (-)
G113457 NA non-coding downstream 847122 10039657 ~ 10039885 (-)
LOC120567726 NA non-coding downstream 973341 9906924 ~ 9913666 (-)
G113438 NA non-coding downstream 1063250 9822437 ~ 9823757 (-)
G113553 xrn1,LOC103355159 non-coding upstream 22548 10911500 ~ 10912177 (-)
G113627 NA non-coding upstream 230050 11119002 ~ 11123476 (-)
LOC120568658 NA non-coding upstream 435654 11324606 ~ 11329834 (-)
G113653 NA non-coding upstream 468782 11357734 ~ 11403230 (-)
G113656 NA non-coding upstream 476419 11365371 ~ 11367604 (-)
brinp2 brinp2,LOC103369811 other downstream 619929 10040686 ~ 10267078 (-)
LOC120568397 NA other downstream 1376510 9400787 ~ 9510497 (-)
chd7 chd7,LOC103370133,LOC102782711 other downstream 1692135 9114384 ~ 9194872 (-)
G113070 NA other downstream 2096965 8780452 ~ 8790042 (-)
trnak-uuu_16 NA other downstream 2399468 8487467 ~ 8487539 (-)
G113805 NA other upstream 1329110 12218062 ~ 12218267 (-)
nedd8l LOC104931181,LOC104949953,LOC107384241,LOC103360313 other upstream 1712228 12601180 ~ 12608569 (-)
LOC120568934 LOC104956577 other upstream 1871796 12760748 ~ 12768625 (-)
LOC120568578 wdr48 other upstream 2077514 12966466 ~ 12975328 (-)
G114152 NA other upstream 2195609 13084561 ~ 13088563 (-)

Expression


Co-expression Network