G113619


Basic Information

Item Value
gene id G113619
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 11519300 ~ 11524768 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU153152
gcaTTTTTTACACTGTCTACAAGTACGTATTCTTACTTGGAGGCCTGAGTGAGACAGAACTGTCAGCTGGCCTTCAGTAGCGCCACCACAACCACGTTTCCGTGCAGCTCTTGCATGGGTGAATGTCCCTTTATCGCCCAGTCAGGGGCGGGTTTGCAGATCCTGGAGGGGTCATTGTCGCCCTCCACTGTGAGACTGACATGCGAGGCCCACAGCAGACCTGGCAGGGCCGCGTACAGCCACAGCAATGAGAGAGGGTTCATTGTCCCTCCCTGGCTGGCTGGGACTGAATCTACCTGACCTCTGTCCACTCCCT
>TU153154
agaaaataatTCTCACCTGGAAAAAAACACGATTGTTTTTAGTCCCATTTAGAACATGAGGTAGTGGTGTATTCCAGCCCCTTGTGGCCAAAATGAGTATTACAACACCAAACACTAGAAAAATGATTCTGAGACTCTTCGCAAGAAAGCAAATGAGACTTTTCCCAAATTTCCCAAAACATGGATCTATTGCTTTAATATCTCTCTACTGTAAAAAGGGTTATTCTCTTTATTGTGAAAGAGGACAAAATAACTTTCCATATTCAATTACACAAACTGTACAGGCTAAACActttataaatgtattttctttttaatggagAACAACAATCCAAACGTTCATTCTACATTCAGGTAATTAATCAGAGGTCAAGTAACAACGCTTTTAAATCCACAGCAAATATGCAAAATGTATTAACCGGagcaatgtacagtatgttaatcCAGTAATACTGCATATAATATAAGTGAAAAATACTGTTTGCTGGTGTGATTTATAATATCTAATGATTTAATTGGATTAAGTATACTAATTAAATTGATTACACCACTTTCCATATGCTTGTACGCATGCAAATGAATAAAAGACCGCATTTGAACCTCTTGTTATATGTAAATAGTAATGAAACAGCACAGCATATCACTTCCAGATCCTGCACGAGACATGACTTACAGAAGCAGAAACTGGAACCAGAAGGAGAATGTTTGAACAGTAATCTGACTGAGGTTGGCTCACTAGCAGCGTACCACATCCTCTGACTCTGTCTGGGTGGCAATAACCATCAGCACATCCGAATCTCTCCACACACATCCATCTACAGCGTCCTGCAGGCAGGTTTTACTTCATAGACTTCATTAGTGGGAGAAGACAGCGAAGCACTGGCTATACGTTTTCCACACAGAGGACTGAGGTGTGGCGATGCTAGCAGAGGAAAAACACAATCCGATTACAGCTGAAACAGATTCAACGGCTCAGTTTACCTGTATGTTCTGtTGtgaaaagtaatcattaatttacatGTGAAGAACGTTGTATACgttccatacaacgttcttgacatgtaaaaataatgattactttcatggaattttgggtgtttcattcaaatttatagcatttgaaaaaaaactgttgaaatggtctcaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU153152 False 316 lncRNA 0.56 2 11523548 11524768
TU153154 True 1147 lncRNA 0.36 2 11519300 11523134

Neighbor

gene id symbol gene type direction distance location
urod urod coding upstream 142718 11365369 ~ 11376582 (+)
lyn lyn,LOC100711419,LOC102310923,LOC101477890 coding upstream 154604 11346445 ~ 11364696 (+)
LOC120567621 LOC103360515,LOC104929875 coding upstream 379416 11128019 ~ 11139884 (+)
LOC120567856 LOC104929871,LOC103355149,LOC100690953,LOC102207159 coding upstream 395825 11100278 ~ 11123475 (+)
LOC120567862 LOC104961053,LOC103355148,LOC107384202 coding upstream 419084 11096777 ~ 11100216 (+)
toe1 NA coding downstream 6070 11530838 ~ 11537187 (+)
tmem53 tmem53,LOC102777675 coding downstream 13286 11538054 ~ 11540262 (+)
rnf220a rnf220,LOC103363915,LOC101079104,LOC103396675,LOC102292039,LOC102777210 coding downstream 197349 11722117 ~ 11874494 (+)
klf17 klf2 coding downstream 439210 11963978 ~ 11966608 (+)
slc6a9 slc6a9,LOC102776426 coding downstream 456371 11981139 ~ 12062243 (+)
LOC120567863 NA non-coding upstream 463494 11046556 ~ 11055806 (+)
G113498 LOC104957117 non-coding upstream 591057 10926456 ~ 10928243 (+)
G113492 NA non-coding upstream 631633 10886992 ~ 10887667 (+)
LOC120569030 NA non-coding upstream 676080 10840517 ~ 10843220 (+)
LOC120569032 NA non-coding upstream 680197 10837503 ~ 10839103 (+)
G113620 NA non-coding downstream 210 11524978 ~ 11525250 (+)
G113621 NA non-coding downstream 1243 11526011 ~ 11579470 (+)
LOC120568871 NA non-coding downstream 58136 11582904 ~ 11694250 (+)
G113682 NA non-coding downstream 59668 11584436 ~ 11584636 (+)
G113681 NA non-coding downstream 183606 11708374 ~ 11722041 (+)
pkia pkia,LOC102780447,LOC102205080 other upstream 173075 11332568 ~ 11346225 (+)
LOC120568835 NA other upstream 632822 10885595 ~ 10886478 (+)
G113130 NA other upstream 2516732 8944477 ~ 9002568 (+)
pdca LOC103370803,LOC104933924,LOC101478313,LOC102200750,LOC100699795,LOC102301525 other upstream 2616453 8895927 ~ 8902847 (+)
LOC120568881 mfsd12,LOC104931866 other upstream 2693489 8812897 ~ 8825811 (+)
abhd4 abhd4 other downstream 597901 12122669 ~ 12128022 (+)
LOC120568189 nop9 other downstream 632681 12157449 ~ 12166277 (+)
ap1g2 LOC106903824,LOC103138413,LOC106934762,LOC101486457,LOC103478890,LOC100694377 other downstream 1057874 12582642 ~ 12599840 (+)
LOC120568152 LOC104963178 other downstream 1376771 12901539 ~ 12907243 (+)
LOC120567760 LOC103360284,LOC108238605,LOC104963178 other downstream 1386671 12911439 ~ 12919198 (+)

Expression


Co-expression Network