G113621


Basic Information

Item Value
gene id G113621
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 11526011 ~ 11579470 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU153157
TATTTTCTCAGTGTCAGTGATGTTTTGGATATTGAATGTGAGCATTTATTTATACCCATTGTGGTTACAAGTTGTGGTACAACTGCAATGCCAGTCTGAATACTTCCAGGCAGAAATATACAATCTAGTGTAGAATCGCACTTCCTATAGCTATTTACCAATTGAGGGTTTACTTTCATTTCCTTGTTGACTATACACAGCTCTTAAGGGTGTCCTACAGAATAAATTCTATTATTTGTTACCGAAAAAAGGTTTCCGTTTTGCAAATGTGATCAAAATAGGCTACATGAATTAAGGACATCAACCCTAATTTTGCTGACAGCATTTGAATGATTTGTAGAAGAGGATATTTCAAACAGCATAGTTTGAGACCAAACCCCACTGATTACGTTTAAATGCAGTTCCCATCGACAGTACACGCAaataactttggtcttgtcaagaGAACAcgctggaagggctttgaaactcaacttgtcgttcaaaagacccttttcttCATCCGCTTCTGCTAAAGGAGCTTTGTTTCTTTGCGTCTTGAGCAGCTTTTTGATTTAGCATTGATTTAGTTAAACTGTACGTAATAAAGCCTGTAACTCAGAAACGGGAAGTCTCTCTTTAGATTAGGTGTGTGGCTCTTACGATattcttttatttgtgtgtgggtTTAAAGCTATAgggcgtagtttctgtctcccccatgaggaattgtaATGacaactgtcggcgcgtccacacgatacaagccttctgtgatcgtgcgttgaatgtaacagacgttcattaatatcaaaaagttacgcaccaAAGCTTTAACCTCCGAAGCCATACTGGGTGCGGCGTACACCACATTAATTGCAATCACCGTCTTCTTAATGACGTGCTCGCTTTTAGGTGACGGCATCACGGCTCACGCTCTCCCTTCAGCCCGCTGCGGCTCAGACCGGAGATGCGCTTCACTTCCGCCCGCAGCAAGCCACATGTCCTGTGATCCCCTGGATGTTATCACGGCGCACTTTTAcgtttctgctagccatccacaaAGCACGGAAGTACAATGTCACTGCTGCATCGCATCCTGATTTCCCAAACATCGGTCCGGCCCGATGCCCAAATCACAGACCGTTTGTGCGTTAAtcgtgctttaaaaaaaaagtgtggcgTTAAAAGTCATTTGTCAACTTGTTATTAACatgttcattttgacagccctaataaatatataatttcttatttttattctaattacattatttttaagTAGAGCtaggcaatatattgatattatatcgatattgggatatgagactagatatcatcttagattttggatattgtaatattgtgatatgacataagtgttgtcttttcctggttttaaaggctgcattacagtaaagtgatgtacttttctgaacttaccagactGttgttatat

Function

GO:

id name namespace
GO:0022402 cell cycle process biological_process
GO:0051726 regulation of cell cycle biological_process
GO:0010948 negative regulation of cell cycle process biological_process
GO:0044770 cell cycle phase transition biological_process
GO:0044772 mitotic cell cycle phase transition biological_process
GO:0007049 cell cycle biological_process
GO:0007346 regulation of mitotic cell cycle biological_process
GO:0007093 mitotic cell cycle checkpoint biological_process
GO:0009987 cellular process biological_process
GO:0045930 negative regulation of mitotic cell cycle biological_process
GO:0010564 regulation of cell cycle process biological_process
GO:1901987 regulation of cell cycle phase transition biological_process
GO:1901988 negative regulation of cell cycle phase transition biological_process
GO:1901990 regulation of mitotic cell cycle phase transition biological_process
GO:1901991 negative regulation of mitotic cell cycle phase transition biological_process

KEGG:

id description
ko03030 DNA replication
ko03460 Fanconi anemia pathway
ko04111 Cell cycle - yeast

RNA

RNA id representative length rna type GC content exon number start site end site
TU153157 True 1438 lncRNA 0.40 2 11526011 11579470

Neighbor

gene id symbol gene type direction distance location
urod urod coding upstream 149429 11365369 ~ 11376582 (+)
lyn lyn,LOC100711419,LOC102310923,LOC101477890 coding upstream 161315 11346445 ~ 11364696 (+)
LOC120567621 LOC103360515,LOC104929875 coding upstream 386127 11128019 ~ 11139884 (+)
LOC120567856 LOC104929871,LOC103355149,LOC100690953,LOC102207159 coding upstream 402536 11100278 ~ 11123475 (+)
LOC120567862 LOC104961053,LOC103355148,LOC107384202 coding upstream 425795 11096777 ~ 11100216 (+)
rnf220a rnf220,LOC103363915,LOC101079104,LOC103396675,LOC102292039,LOC102777210 coding downstream 142647 11722117 ~ 11874494 (+)
klf17 klf2 coding downstream 384508 11963978 ~ 11966608 (+)
slc6a9 slc6a9,LOC102776426 coding downstream 401669 11981139 ~ 12062243 (+)
lrrc24 LOC103370491,LOC104954089,LOC102776146,LOC102302164 coding downstream 495506 12074976 ~ 12089561 (+)
prmt5 prmt5 coding downstream 976216 12555686 ~ 12562978 (+)
G113620 NA non-coding upstream 761 11524978 ~ 11525250 (+)
G113619 NA non-coding upstream 1243 11519300 ~ 11524768 (+)
LOC120567863 NA non-coding upstream 470205 11046556 ~ 11055806 (+)
G113498 LOC104957117 non-coding upstream 597768 10926456 ~ 10928243 (+)
G113492 NA non-coding upstream 638344 10886992 ~ 10887667 (+)
LOC120568871 NA non-coding downstream 3434 11582904 ~ 11694250 (+)
G113682 NA non-coding downstream 4966 11584436 ~ 11584636 (+)
G113681 NA non-coding downstream 128904 11708374 ~ 11722041 (+)
G113689 NA non-coding downstream 247933 11827403 ~ 11887669 (+)
LOC120568095 NA non-coding downstream 299243 11878713 ~ 11954877 (+)
pkia pkia,LOC102780447,LOC102205080 other upstream 179786 11332568 ~ 11346225 (+)
LOC120568835 NA other upstream 639533 10885595 ~ 10886478 (+)
G113130 NA other upstream 2523443 8944477 ~ 9002568 (+)
pdca LOC103370803,LOC104933924,LOC101478313,LOC102200750,LOC100699795,LOC102301525 other upstream 2623164 8895927 ~ 8902847 (+)
LOC120568881 mfsd12,LOC104931866 other upstream 2700200 8812897 ~ 8825811 (+)
abhd4 abhd4 other downstream 543199 12122669 ~ 12128022 (+)
LOC120568189 nop9 other downstream 577979 12157449 ~ 12166277 (+)
ap1g2 LOC106903824,LOC103138413,LOC106934762,LOC101486457,LOC103478890,LOC100694377 other downstream 1003172 12582642 ~ 12599840 (+)
LOC120568152 LOC104963178 other downstream 1322069 12901539 ~ 12907243 (+)
LOC120567760 LOC103360284,LOC108238605,LOC104963178 other downstream 1331969 12911439 ~ 12919198 (+)

Expression


Co-expression Network