G113696


Basic Information

Item Value
gene id G113696
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 11943899 ~ 11944356 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU153254
cttttttcataatagtaaattattgaatataccatgtacacactgttgttctaaatctaaagctcttttgtctttcataggcttatatctacatttacaatgttctagagtgaaagtaatctgctgagagTGGTATGCACAAATCTGAttaatttgtaatgctgaaatagtcactAGATAGTTGCATGCCTGTTCTCATTTCTGAAGGTTTGAAGtagacgccactgtaaagctacttaagatgggcttctctcatggtcaatccgtggttgatcacatgatgaataagtgtggccctgatctcatcagagatgcctctccttctttctcttcttccctcctcctcctcctcctcctcctgaggTTTCATAAATCATGTGacatgaaaatattttgtgtgtaagcagttaaGATAATCAGCAGGTTAATTggtaattaaaataattgtttgttcCAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU153254 True 458 lncRNA 0.36 1 11943899 11944356

Neighbor

gene id symbol gene type direction distance location
rnf220a rnf220,LOC103363915,LOC101079104,LOC103396675,LOC102292039,LOC102777210 coding upstream 69405 11722117 ~ 11874494 (+)
tmem53 tmem53,LOC102777675 coding upstream 403637 11538054 ~ 11540262 (+)
toe1 NA coding upstream 406712 11530838 ~ 11537187 (+)
urod urod coding upstream 567317 11365369 ~ 11376582 (+)
lyn lyn,LOC100711419,LOC102310923,LOC101477890 coding upstream 579203 11346445 ~ 11364696 (+)
klf17 klf2 coding downstream 19622 11963978 ~ 11966608 (+)
slc6a9 slc6a9,LOC102776426 coding downstream 36783 11981139 ~ 12062243 (+)
lrrc24 LOC103370491,LOC104954089,LOC102776146,LOC102302164 coding downstream 130620 12074976 ~ 12089561 (+)
prmt5 prmt5 coding downstream 611330 12555686 ~ 12562978 (+)
slc7a8b slc7a8 coding downstream 621638 12565994 ~ 12581212 (+)
G113689 NA non-coding upstream 56230 11827403 ~ 11887669 (+)
G113681 NA non-coding upstream 221858 11708374 ~ 11722041 (+)
LOC120568871 NA non-coding upstream 249649 11582904 ~ 11694250 (+)
G113682 NA non-coding upstream 359263 11584436 ~ 11584636 (+)
G113621 NA non-coding upstream 364429 11526011 ~ 11579470 (+)
G113697 NA non-coding downstream 10930 11955286 ~ 11955546 (+)
G113763 NA non-coding downstream 200212 12144568 ~ 12152157 (+)
G113773 NA non-coding downstream 233503 12177859 ~ 12200219 (+)
G113776 NA non-coding downstream 263370 12207726 ~ 12208026 (+)
G113777 NA non-coding downstream 263748 12208104 ~ 12208318 (+)
pkia pkia,LOC102780447,LOC102205080 other upstream 597674 11332568 ~ 11346225 (+)
LOC120568835 NA other upstream 1057421 10885595 ~ 10886478 (+)
G113130 NA other upstream 2941331 8944477 ~ 9002568 (+)
pdca LOC103370803,LOC104933924,LOC101478313,LOC102200750,LOC100699795,LOC102301525 other upstream 3041052 8895927 ~ 8902847 (+)
LOC120568881 mfsd12,LOC104931866 other upstream 3118088 8812897 ~ 8825811 (+)
abhd4 abhd4 other downstream 178313 12122669 ~ 12128022 (+)
LOC120568189 nop9 other downstream 213093 12157449 ~ 12166277 (+)
ap1g2 LOC106903824,LOC103138413,LOC106934762,LOC101486457,LOC103478890,LOC100694377 other downstream 638286 12582642 ~ 12599840 (+)
LOC120568152 LOC104963178 other downstream 957183 12901539 ~ 12907243 (+)
LOC120567760 LOC103360284,LOC108238605,LOC104963178 other downstream 967083 12911439 ~ 12919198 (+)

Expression


Co-expression Network