G113773


Basic Information

Item Value
gene id G113773
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 12177859 ~ 12200219 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU153348
TGTTCTCTCCAACCTGgcctctttctctttcaaaGTTGGTTTCACTGATAGGCAGAAGATAAAGGTTCAGTGCTGCGACCCAGGCTGATTTCGGCTCTATCTAGGCTATCcaactttttctctttctttctctcccttctctccttttctgACCTTAATCTGCTAATGCTCATCTGCTCCTCCCTACTATCTTCCATTTTATCCTCTTGGTCTCCTCCACATCATTtgatctggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtacatatgtggGAGTGtgtatgcgcgtgtgtgtgtatcacagtGCACTGAGGTCGTGGCAGGAGCGAGACTTCTGGCGGAGGATCTTGCTGCCCCGGTGGCGGCT
>TU153349
TGTTCTCTCCAACCTGgcctctttctctttcaaaGTTGGTTTCACTGATAGGCAGAAGATAAAGGTTCAGTGCTGCGACCCAGGCTGATTTCGGCTCTATCTAGGCTATCcaactttttctctttctttctctcccttctctccttttctgACCTTAATCTGCTAATGCTCATCTGCTCCTCCCTACTATCTTCCATTTTATCCTCTTGGTCTCCTCCACATCATTtgatctggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtacatgtgtgtgtgtgtgtttgtgtgt

Function

GO: NA

KEGG:

id description
ko04723 Retrograde endocannabinoid signaling

RNA

RNA id representative length rna type GC content exon number start site end site
TU153348 True 369 lncRNA 0.49 2 12177859 12178293
TU153349 False 291 lncRNA 0.45 3 12177859 12200219

Neighbor

gene id symbol gene type direction distance location
lrrc24 LOC103370491,LOC104954089,LOC102776146,LOC102302164 coding upstream 88298 12074976 ~ 12089561 (+)
slc6a9 slc6a9,LOC102776426 coding upstream 115616 11981139 ~ 12062243 (+)
klf17 klf2 coding upstream 211251 11963978 ~ 11966608 (+)
rnf220a rnf220,LOC103363915,LOC101079104,LOC103396675,LOC102292039,LOC102777210 coding upstream 303365 11722117 ~ 11874494 (+)
tmem53 tmem53,LOC102777675 coding upstream 637597 11538054 ~ 11540262 (+)
prmt5 prmt5 coding downstream 355467 12555686 ~ 12562978 (+)
slc7a8b slc7a8 coding downstream 365775 12565994 ~ 12581212 (+)
zp3f.2 NA coding downstream 405175 12605394 ~ 12608144 (+)
LOC120568040 NA coding downstream 408938 12609157 ~ 12611158 (+)
LOC120568617 rnf212b coding downstream 411923 12612142 ~ 12616610 (+)
G113763 NA non-coding upstream 25702 12144568 ~ 12152157 (+)
G113697 NA non-coding upstream 222313 11955286 ~ 11955546 (+)
LOC120568095 NA non-coding upstream 222982 11878713 ~ 11954877 (+)
G113696 NA non-coding upstream 233503 11943899 ~ 11944356 (+)
G113689 NA non-coding upstream 290190 11827403 ~ 11887669 (+)
G113776 NA non-coding downstream 7507 12207726 ~ 12208026 (+)
G113777 NA non-coding downstream 7885 12208104 ~ 12208318 (+)
G113778 NA non-coding downstream 8495 12208714 ~ 12209440 (+)
G113782 NA non-coding downstream 21157 12221376 ~ 12221684 (+)
G113811 NA non-coding downstream 156121 12356340 ~ 12356721 (+)
LOC120568189 nop9 other upstream 11582 12157449 ~ 12166277 (+)
abhd4 abhd4 other upstream 49837 12122669 ~ 12128022 (+)
pkia pkia,LOC102780447,LOC102205080 other upstream 831634 11332568 ~ 11346225 (+)
LOC120568835 NA other upstream 1291381 10885595 ~ 10886478 (+)
G113130 NA other upstream 3175291 8944477 ~ 9002568 (+)
ap1g2 LOC106903824,LOC103138413,LOC106934762,LOC101486457,LOC103478890,LOC100694377 other downstream 382423 12582642 ~ 12599840 (+)
LOC120568152 LOC104963178 other downstream 701320 12901539 ~ 12907243 (+)
LOC120567760 LOC103360284,LOC108238605,LOC104963178 other downstream 711220 12911439 ~ 12919198 (+)
G113979 LOC104959684 other downstream 728996 12929215 ~ 12975637 (+)
LOC120569010 NA other downstream 752329 12952548 ~ 12960349 (+)

Expression


Co-expression Network