G113778


Basic Information

Item Value
gene id G113778
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 12208714 ~ 12209440 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU153354
gtatacagcgctatgtgtacgacttcttcatttggttacaacaaagacaaaagtgcttaaaactgtagaaaaccacaatgtttactacgtgtgatgcacgacgtagccatctttgaaagtgagctcggggtcctctgagttcagacgacttgacgagttgtaaatacgacctcgggggcgatctttttgcaacttccgggtcgtaactccggaaaacaactcgtaaaacgacttcggtggacaaaaagaacgcaccattacacCTATTGGCACCATGACGAATGCAAGGGGGAGATTACACGCCAGGTAAGcgaaaagagaattaaaacgacaacgcaacaggcaaagcaacaagaccaaagtaaatattggagtggctagaacagctgcgtgtaaacgagggagagagctaatttcgggttcggccaccgtaggaggaagggctagaaagtaatattctgTTGGTTGTCATTTACAATTTtactgctagatgggagaaattcttacacaatgtagctttaaaagaactgagagttgcggcggacctgcagttttctgggagtttgttccagatatgtggtgcataaaaactgaacgctgcttccccctgttaaGTTCTGACTCTAGGGAGagcaagtagacctgtcccagacgacctgagaggtctgggtggttcatagtcTATTAGTCTATTCTAGTCTATTTCAAGGACTTAACCTCACAGGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU153354 True 727 lncRNA 0.45 1 12208714 12209440

Neighbor

gene id symbol gene type direction distance location
lrrc24 LOC103370491,LOC104954089,LOC102776146,LOC102302164 coding upstream 119153 12074976 ~ 12089561 (+)
slc6a9 slc6a9,LOC102776426 coding upstream 146471 11981139 ~ 12062243 (+)
klf17 klf2 coding upstream 242106 11963978 ~ 11966608 (+)
rnf220a rnf220,LOC103363915,LOC101079104,LOC103396675,LOC102292039,LOC102777210 coding upstream 334220 11722117 ~ 11874494 (+)
tmem53 tmem53,LOC102777675 coding upstream 668452 11538054 ~ 11540262 (+)
prmt5 prmt5 coding downstream 346246 12555686 ~ 12562978 (+)
slc7a8b slc7a8 coding downstream 356554 12565994 ~ 12581212 (+)
zp3f.2 NA coding downstream 395954 12605394 ~ 12608144 (+)
LOC120568040 NA coding downstream 399717 12609157 ~ 12611158 (+)
LOC120568617 rnf212b coding downstream 402702 12612142 ~ 12616610 (+)
G113777 NA non-coding upstream 396 12208104 ~ 12208318 (+)
G113776 NA non-coding upstream 688 12207726 ~ 12208026 (+)
G113773 NA non-coding upstream 8495 12177859 ~ 12200219 (+)
G113763 NA non-coding upstream 56557 12144568 ~ 12152157 (+)
G113697 NA non-coding upstream 253168 11955286 ~ 11955546 (+)
G113782 NA non-coding downstream 11936 12221376 ~ 12221684 (+)
G113811 NA non-coding downstream 146900 12356340 ~ 12356721 (+)
G113843 LOC104931181,LOC104949953,LOC107384241,LOC103360313 non-coding downstream 391743 12601183 ~ 12602922 (+)
G113852 NA non-coding downstream 416639 12626079 ~ 12627519 (+)
G113938 NA non-coding downstream 568900 12778340 ~ 12779398 (+)
LOC120568189 nop9 other upstream 42437 12157449 ~ 12166277 (+)
abhd4 abhd4 other upstream 80692 12122669 ~ 12128022 (+)
pkia pkia,LOC102780447,LOC102205080 other upstream 862489 11332568 ~ 11346225 (+)
LOC120568835 NA other upstream 1322236 10885595 ~ 10886478 (+)
G113130 NA other upstream 3206146 8944477 ~ 9002568 (+)
ap1g2 LOC106903824,LOC103138413,LOC106934762,LOC101486457,LOC103478890,LOC100694377 other downstream 373202 12582642 ~ 12599840 (+)
LOC120568152 LOC104963178 other downstream 692099 12901539 ~ 12907243 (+)
LOC120567760 LOC103360284,LOC108238605,LOC104963178 other downstream 701999 12911439 ~ 12919198 (+)
G113979 LOC104959684 other downstream 719775 12929215 ~ 12975637 (+)
LOC120569010 NA other downstream 743108 12952548 ~ 12960349 (+)

Expression


Co-expression Network