G113782


Basic Information

Item Value
gene id G113782
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 12221376 ~ 12221684 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU153359
gaaaatttcactttatgaggttttttaacattaatatgcgttcccccagcctgcctatggtcccccagtggctagaaatggcgataggtgtaaaccgagccctgggtatcctgctctgcctttgagaaaattaaagctcagatgggccgatcttatgaggtcataaggagcaaggttacctcccctttctctgctttgcccgcccagagaatttggcccacccatgagagagagagacatcatggctttcaaacgagcaaagtggcagttggtcaaggccacacccccaccctccaacttgcccccccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU153359 True 309 lncRNA 0.51 1 12221376 12221684

Neighbor

gene id symbol gene type direction distance location
lrrc24 LOC103370491,LOC104954089,LOC102776146,LOC102302164 coding upstream 131815 12074976 ~ 12089561 (+)
slc6a9 slc6a9,LOC102776426 coding upstream 159133 11981139 ~ 12062243 (+)
klf17 klf2 coding upstream 254768 11963978 ~ 11966608 (+)
rnf220a rnf220,LOC103363915,LOC101079104,LOC103396675,LOC102292039,LOC102777210 coding upstream 346882 11722117 ~ 11874494 (+)
tmem53 tmem53,LOC102777675 coding upstream 681114 11538054 ~ 11540262 (+)
prmt5 prmt5 coding downstream 334002 12555686 ~ 12562978 (+)
slc7a8b slc7a8 coding downstream 344310 12565994 ~ 12581212 (+)
zp3f.2 NA coding downstream 383710 12605394 ~ 12608144 (+)
LOC120568040 NA coding downstream 387473 12609157 ~ 12611158 (+)
LOC120568617 rnf212b coding downstream 390458 12612142 ~ 12616610 (+)
G113778 NA non-coding upstream 11936 12208714 ~ 12209440 (+)
G113777 NA non-coding upstream 13058 12208104 ~ 12208318 (+)
G113776 NA non-coding upstream 13350 12207726 ~ 12208026 (+)
G113773 NA non-coding upstream 21157 12177859 ~ 12200219 (+)
G113763 NA non-coding upstream 69219 12144568 ~ 12152157 (+)
G113811 NA non-coding downstream 134656 12356340 ~ 12356721 (+)
G113843 LOC104931181,LOC104949953,LOC107384241,LOC103360313 non-coding downstream 379499 12601183 ~ 12602922 (+)
G113852 NA non-coding downstream 404395 12626079 ~ 12627519 (+)
G113938 NA non-coding downstream 556656 12778340 ~ 12779398 (+)
G113956 NA non-coding downstream 639941 12861625 ~ 12874310 (+)
LOC120568189 nop9 other upstream 55099 12157449 ~ 12166277 (+)
abhd4 abhd4 other upstream 93354 12122669 ~ 12128022 (+)
pkia pkia,LOC102780447,LOC102205080 other upstream 875151 11332568 ~ 11346225 (+)
LOC120568835 NA other upstream 1334898 10885595 ~ 10886478 (+)
G113130 NA other upstream 3218808 8944477 ~ 9002568 (+)
ap1g2 LOC106903824,LOC103138413,LOC106934762,LOC101486457,LOC103478890,LOC100694377 other downstream 360958 12582642 ~ 12599840 (+)
LOC120568152 LOC104963178 other downstream 679855 12901539 ~ 12907243 (+)
LOC120567760 LOC103360284,LOC108238605,LOC104963178 other downstream 689755 12911439 ~ 12919198 (+)
G113979 LOC104959684 other downstream 707531 12929215 ~ 12975637 (+)
LOC120569010 NA other downstream 730864 12952548 ~ 12960349 (+)

Expression


Co-expression Network