G113828


Basic Information

Item Value
gene id G113828
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 12356334 ~ 12356891 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU153431
attgtttgtgtaaccagagtttactaaaaagaaaggttttgaacaactcaccgtagctcttgttgtttccggccgctaACACCTcagcagtcaaaacgagtcgatatccgaatgcgaatgaagGGACTCCATATGAGGCAtatacaaggtcaatattgtatttcactaacgacaaaacaataaattatccgtgcatttatatggaactaagctttaggagctttccgtctttactctcctccctgttatgttgcattcggaaatcgattgtttttgactgataaaatgcctgtggccggaaacaacaagagctacggtgagttgttcaaaaccttctttttagtaaactttttttagtaaact
>TU153433
gacggaagcgccacttttaagatttaccgtattttcgtttttcggtcaaatgaccttttgaatgggagtgatatGGGCAcctttatgctagcctcaaaatagctatttttaaaacactaagaaggctcaacacaacatgaaacGTTGCTCGAAGTAttaccaggggctctacaccttaacgaaggtattgacaacattgtttgtgtaaccagagtttactaaaaagaaaggttttgaacaactcaccgtagctcttgttgtttccggccgctaACACCTcagcagtcaaaacgagtcgatatccgaatgcgaatgaagGGACTCCATATGAGGCAtatacaaggtcaatattgtatttcactaacgacaaaacaataaattatccgtgcatttatatggaactaagctttaggagctttccgtctttactctcctccctgttatgttgcattcggaaatcgattgtttttgactgataaaatgcctgtggc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU153431 False 363 lncRNA 0.38 1 12356334 12356696
TU153433 True 491 lncRNA 0.40 1 12356401 12356891

Neighbor

gene id symbol gene type direction distance location
carmil3 NA coding downstream 28294 12230121 ~ 12328040 (-)
rem2 rem2 coding downstream 148664 12176857 ~ 12207670 (-)
tgm1l1 LOC103370497 coding downstream 204253 12131437 ~ 12152081 (-)
dad1 dad1,LOC101158164 coding downstream 234256 12116802 ~ 12122078 (-)
pigr NA coding downstream 243087 12109272 ~ 12113247 (-)
LOC120568866 cdh24,LOC102798176 coding upstream 4092 12360983 ~ 12514630 (-)
psmb5 psmb5,LOC108238608 coding upstream 189470 12546361 ~ 12553571 (-)
psmb11a psmb11,LOC102789740,LOC102210751 coding upstream 196677 12553568 ~ 12554626 (-)
homeza homez coding upstream 259729 12616620 ~ 12621709 (-)
dhrs1 dhrs1 coding upstream 265854 12622745 ~ 12627332 (-)
G113810 NA non-coding downstream 253 12353843 ~ 12356081 (-)
G113806 NA non-coding downstream 126996 12228979 ~ 12229338 (-)
G113799 NA non-coding downstream 147364 12208532 ~ 12208970 (-)
G113772 NA non-coding downstream 180752 12163161 ~ 12175582 (-)
G113755 NA non-coding downstream 228189 12126957 ~ 12128145 (-)
LOC120568043 NA non-coding upstream 228638 12585529 ~ 12600592 (-)
G113933 NA non-coding upstream 400760 12757651 ~ 12759273 (-)
G113945 NA non-coding upstream 432948 12789839 ~ 12793027 (-)
G114129 col6a1,col6a2 non-coding upstream 596489 12953380 ~ 13167706 (-)
LOC120567923 NA non-coding upstream 666379 13023270 ~ 13039958 (-)
G113805 NA other downstream 138067 12218062 ~ 12218267 (-)
LOC120567758 NA other downstream 1467382 10887007 ~ 10888952 (-)
brinp2 brinp2,LOC103369811 other downstream 2089256 10040686 ~ 10267078 (-)
LOC120568397 NA other downstream 2845837 9400787 ~ 9510497 (-)
chd7 chd7,LOC103370133,LOC102782711 other downstream 3161462 9114384 ~ 9194872 (-)
nedd8l LOC104931181,LOC104949953,LOC107384241,LOC103360313 other upstream 244289 12601180 ~ 12608569 (-)
LOC120568934 LOC104956577 other upstream 403857 12760748 ~ 12768625 (-)
LOC120568578 wdr48 other upstream 609575 12966466 ~ 12975328 (-)
G114152 NA other upstream 727670 13084561 ~ 13088563 (-)
dis3l2 dis3l2 other upstream 1112640 13469531 ~ 13482225 (-)

Expression


Co-expression Network