G114166 (rpl37a,RPL37A)


Basic Information

Item Value
gene id G114166
gene name rpl37a,RPL37A
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 13114645 ~ 13117450 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU153994
GCCCTTTCTTGCATTGGTGAGGCATCTTTTTGTGGTTACAGCCCACAAGTTTTCATTTTCTGCTACATTATAAAACAGATTaacaaaagacacaaagaaTTCCACTCCAGACTGATTTATTTGTGGTGTTGAGGCCGTGTCCAGGTCGTTTGAATTACAGAAAAAGTCCCAAATCCACCAGTGACTCTTGCACTGGTTTACTGGTCCTTCAACTCCTTCAGTCTCCTGATCGCAGATTTGACTGTGACAGCTGACGTTGtgTTGTATGTCCAGGCGCCTCCTGCCACGGTCTTCCTGCAGGACCCACAGTGCCAGATACCAACAGCCCTCCTCTTCATCTTGGTCTTGCCACAGAATGAGCAGGTGTATTTAGCGTGCTGGGAGATTTCAATTTTCTTCACCATCTTCCTCAGCGACGCGCCATAACGCGTGCCATATTTACCAACGATCCCCACCTTCTTGGTACGCTTGGCCATCGTTTCAGTGGAGACGTAGGTCCAAAGAGGGATTGCTTACCGCGCAGG
>TU153995
GCCCTTTCTTGCATTGGTGAGGCATCTTTTTGTGGTTACAGCCCACAAGTTTTCATTTTCTGCTACATTATAAAACAGATTaacaaaagacacaaagaaTTCCACTCCAGACTGATTTATTTGTGGTGTTGAGGCCGTGTCCAGGTCGTTTGAATTACAGAAAAAGTCCCAAATCCACCAGTGACTCTTGCACTGGTTTACTGGTCCTTCAACTCCTTCAGTCTCCTGATCGCAGATTTGACTGTGACAGCTGACGTTGtgctgcaaaaaacaaaaaaacattacttatACTTTGTGTATGCCTTTTATGAATATTTCCAACTTCCACTGTCAAGAGATTCCCATCCTATTCAAGAGCTTGTCTTTCCTTATTTAGAAAACTAAATAGTCGTGAAAAAACCTTGGGTGTTGCTCTACTTAGTCACGGTCACGCAGGCTTTCTACTGGGTATTTTGGTTCTCTCCATCGATGTAAATGTTCAATGAATGAGAACATCTGAGAGGGCTGATTCAATTCTTGAGTAATTGAGATTTACCATACATATGAAACCAGTTTACAAACTTCAGTCTAGGTATGCAAGATTGATTTATAAGTTTTGGTAAGGTTGGTTTTCACAACTGATGCCAACCATACAGGAGTTTGCATGAACTGTAGCCTACTCGAAAGAGACCGGCTTTTCAAGTGGACTTGGGGACGGATCGACCAACTGTGCCCGGGTACGGTACGTAGTGTCCACActaaacaaactggactttgGTTCCAAGTGTACTCCGATCAGGGCCCAGGTccctgatgtgaaagcccccttactgcattatatttttaaatggtCCCCTGCCCGCTGAATTGCgttttttctttacataaaaCCTGGATGGTATGGGCAAAGTATCTGTAATAGATCTGTTTGCAGAGCTTATTGATTGATCCAACAAATATTACATCAATTCACTGTCCCATCACAGCACCCTTCATCACACCAACAAATTAATGTCACATACTAAGACTGAAGCTTATAAACTTGTAATACAATTTAATGTGCATGTcccccaaaggcccattctgagccaggaaaaccCTGGAACCATATTGCACAAACAGGCTAATCACTGGCATTGCCAGATGCCACTGATTAGCTTAGAAGCTTTGCATAATATTGAAACATTAAAGACATCCAGTTCTCCAGGTGAAAGCTGTATGGCTGCTGCTCCATGGGTATACTTCCTACTGTGTTCTGACCATTTACTGTTAGCGCAACAAAACCCAGACATGGCCCTAGCAGCAAGGAGAACTACACAATGCTGCTGCAAAAAGTATGATTGTTGGTAATAGAGTTAAGGGTTCCTACAGTATCCTTTTCAAAATTCCATACTTTTTCAGACTTAGATTACATAGAGGAACACAGAGCTTTTGCCCTTACATATGGCTTACAATTGCCGCCTTTCCCATGTTGGACGATTTATTtgagtttcttttttaattcataTGAACAAATTCACAGCAACAATATCAGTTTGGGTGAGTACATGTTGCCAGACTTGATAGCAGAATTACAGCAAAGCAGAAAGAAACCTACTTGTATGTCCAGGCGCCTCCTGCCACGGTCTTCCTGCAGGACCCACAGTGCCAGATACCAACAGCCCTCCTCTTCATCTTGGTCTGTCAATATCAAATTAGCACATTAGTAACGGTTACAAAACGGTATTCGTTTCCATTTCTCCAGAGACAAATCCAAACATTGTGTACTAAAAACAAGTGCCATTAGCTGCAGTAACGTTACATACACGTAGTCCCACTGCAAGATCATGAATTAGTTAAGGCGAAGTCTTTTGAGGATTTCAAGATATTCCTTACCTTGCCACAGAATGAGCAGGTGTATTTAGCGTGCTGGGAGATTTCAATTTTCTTCACCATCTTCCTCAGCGACGCGCCATAACGCGTGCCATATTTACCAACGATCCCCACCTTCTTGGTACGCTTGGCCTGCGGAAAAGATGTACATCCATCGTTTCAGTGGAGACGTAGGTCCAAAGAGGGATTGCTTACCGCGCAGG

Function

symbol description
rpl37a A structural constituent of ribosome. Predicted to be involved in cytoplasmic translation. Located in cytosolic ribosome. Part of cytosolic large ribosomal subunit.

NR:

description
PREDICTED: periplakin

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU153994 False 524 lncRNA 0.48 4 13114645 13117450
TU153995 True 2054 lncRNA 0.42 2 13114645 13117450

Neighbor

gene id symbol gene type direction distance location
xirp1 LOC104959684 coding downstream 169927 12931398 ~ 12944718 (-)
LOC120568154 NA coding downstream 229198 12872858 ~ 12885447 (-)
hhatla hhatl,LOC108238572,LOC103360290,LOC106926958 coding downstream 260326 12846128 ~ 12854319 (-)
LOC120567650 LOC100690777,LOC102314387,LOC101469034,LOC102212652 coding downstream 270209 12839583 ~ 12844436 (-)
LOC120568729 LOC104956573,LOC103360293 coding downstream 310705 12801906 ~ 12803940 (-)
LOC120568264 LOC104953400 coding upstream 15482 13132932 ~ 13151478 (-)
LOC120568263 LOC104953400 coding upstream 34645 13152095 ~ 13158290 (-)
tmbim1a tmbim1 coding upstream 68804 13186254 ~ 13195957 (-)
casp8 NA coding upstream 79289 13196739 ~ 13207620 (-)
LOC120568680 catip coding upstream 90580 13208030 ~ 13214290 (-)
G114159 NA non-coding downstream 10248 13103242 ~ 13104397 (-)
G114130 col6a2,LOC105007837 non-coding downstream 19816 13091647 ~ 13094829 (-)
G114153 LOC105007837 non-coding downstream 23329 13088686 ~ 13091316 (-)
G114131 NA non-coding downstream 30261 13081614 ~ 13084384 (-)
LOC120567923 NA non-coding downstream 74687 13023270 ~ 13039958 (-)
G114177 NA non-coding upstream 59353 13176803 ~ 13177751 (-)
G114183 NA non-coding upstream 80295 13197745 ~ 13223865 (-)
G114196 lect1 non-coding upstream 163481 13280931 ~ 13286164 (-)
G114199 NA non-coding upstream 169201 13286651 ~ 13287220 (-)
G114202 NA non-coding upstream 170732 13288182 ~ 13288993 (-)
G114152 NA other downstream 26082 13084561 ~ 13088563 (-)
LOC120568578 wdr48 other downstream 139317 12966466 ~ 12975328 (-)
LOC120568934 LOC104956577 other downstream 346020 12760748 ~ 12768625 (-)
nedd8l LOC104931181,LOC104949953,LOC107384241,LOC103360313 other downstream 506076 12601180 ~ 12608569 (-)
G113805 NA other downstream 896378 12218062 ~ 12218267 (-)
dis3l2 dis3l2 other upstream 352081 13469531 ~ 13482225 (-)
tfr1a NA other upstream 832421 13949871 ~ 13968811 (-)
LOC120568687 NA other upstream 1496163 14613613 ~ 14618224 (-)
G114680 NA other upstream 1678468 14795918 ~ 14797044 (-)
mfsd8l2 LOC102304717,LOC102799006,LOC108238243,LOC103479065 other upstream 2172632 15290082 ~ 15304610 (-)

Expression


Co-expression Network