G114177


Basic Information

Item Value
gene id G114177
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 13176803 ~ 13177751 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU154011
TGGGAAGATCCTCGAGGGCTACGTAGAACTCTTTGTTGAGAGGAACATTCCCATGATCCCGAGCAAAGTTGCGCACTGCCCGACAAAGGAAGGGGTAAACCTGTAGTACTCCTCCTGGATGGTGGTAGCCAGCTCCTGGTTGAAGCCCTCCAGGTCTGTGAAGCTCACCAGCAGCGTGTTCCTCTCAGGCCTGATCAGCTCCTCGGCCTCCTGGACATACTTCACCTCCCCATCCCCGGTCTGGAACCTACACACGGGTTCAGGTCCTCCAAGAAAGCCTGGAACAGCTTCTGGCATTTTTCAGCCAACTCGTCTTTCACCATCTCTCCGGCATTCTCCGCAGTTGCTGTGGCAACATCCATGCTGAAACACCGTCAAACTGGAATAACAGACTCAAAAACTTGGGGGAAAATTCACAGAGCCGTACCGCTCTTCTCCGGACAGACACAGCACGCTGTAAAAGTCCTGACAACAGAGCAACAGTTTCGCGCGAAAAGAGGGACACGTGATCTTTGGCGCGCCGCTTTCGTCCAATCGGTAATGCTCTCTGGGTTGTAGCCAATCAGGAGTGATGTGACTGCTCTTTCCCGCGGCACGCTTCCTGC

Function

GO: NA

KEGG:

id description
ko03460 Fanconi anemia pathway

RNA

RNA id representative length rna type GC content exon number start site end site
TU154011 True 605 lncRNA 0.54 3 13176803 13177751

Neighbor

gene id symbol gene type direction distance location
LOC120568263 LOC104953400 coding downstream 18513 13152095 ~ 13158290 (-)
LOC120568264 LOC104953400 coding downstream 25325 13132932 ~ 13151478 (-)
cfap410 cunh21orf2,LOC102788189 coding downstream 61514 13112363 ~ 13115289 (-)
xirp1 LOC104959684 coding downstream 232085 12931398 ~ 12944718 (-)
LOC120568154 NA coding downstream 291356 12872858 ~ 12885447 (-)
tmbim1a tmbim1 coding upstream 8503 13186254 ~ 13195957 (-)
casp8 NA coding upstream 18988 13196739 ~ 13207620 (-)
LOC120568680 catip coding upstream 30279 13208030 ~ 13214290 (-)
LOC120568677 NA coding upstream 37129 13214880 ~ 13218070 (-)
LOC120567607 LOC104935780 coding upstream 47146 13224897 ~ 13230904 (-)
G114129 col6a1,col6a2 non-coding downstream 9097 12953380 ~ 13167706 (-)
G114166 rpl37a,RPL37A non-coding downstream 59353 13114645 ~ 13117450 (-)
G114159 NA non-coding downstream 72406 13103242 ~ 13104397 (-)
G114130 col6a2,LOC105007837 non-coding downstream 81974 13091647 ~ 13094829 (-)
G114153 LOC105007837 non-coding downstream 85487 13088686 ~ 13091316 (-)
G114183 NA non-coding upstream 19994 13197745 ~ 13223865 (-)
G114196 lect1 non-coding upstream 103180 13280931 ~ 13286164 (-)
G114199 NA non-coding upstream 108900 13286651 ~ 13287220 (-)
G114202 NA non-coding upstream 110431 13288182 ~ 13288993 (-)
G114215 LOC103354350,LOC100704451,LOC101473770,LOC106904511,LOC103151571,LOC106963118 non-coding upstream 216710 13394461 ~ 13406830 (-)
G114152 NA other downstream 88240 13084561 ~ 13088563 (-)
LOC120568578 wdr48 other downstream 201475 12966466 ~ 12975328 (-)
LOC120568934 LOC104956577 other downstream 408178 12760748 ~ 12768625 (-)
nedd8l LOC104931181,LOC104949953,LOC107384241,LOC103360313 other downstream 568234 12601180 ~ 12608569 (-)
G113805 NA other downstream 958536 12218062 ~ 12218267 (-)
dis3l2 dis3l2 other upstream 291780 13469531 ~ 13482225 (-)
tfr1a NA other upstream 772120 13949871 ~ 13968811 (-)
LOC120568687 NA other upstream 1435862 14613613 ~ 14618224 (-)
G114680 NA other upstream 1618167 14795918 ~ 14797044 (-)
mfsd8l2 LOC102304717,LOC102799006,LOC108238243,LOC103479065 other upstream 2112331 15290082 ~ 15304610 (-)

Expression


Co-expression Network