G114183


Basic Information

Item Value
gene id G114183
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 13197745 ~ 13223865 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU154019
tgagtACATGATATTAGTGCATCACTAATCTTTATTTCACAGCAAAAAGGTTTACATTTCAGAACTAGCTCATCAGCTAGTTCAGGCAGAGCAAACGTATTTCATCAAAACTCATCAACTGACACATTCCCTTTGTTTCAGTAATAAGAAGTCCATGAACAAGCAGAGCAAAAGCTCCCTAAATTTGAGATCCTTAGCATGTTTTGCAGTCATATTGGTATACTTTTACATGTCACAAGAGTCACATATAACTTGAACAAACTTGCTTTGCTGGCTAAGGCTATAAAAGACATTAGCAAAATAAAACCATAACTTAATGTAATATGAATGTGTCCTTCACATATTGCTTTTATTATATCTATCGAGGCTTTAGTTCTGTGTCCTCCACCTCTGTGATCTCCTCTACAGGCTCAGCTGATGGGGCAGGGTGGAAGAGCtggaaacaacacacacacacacacacacacacacacacacacacacaaaaaagtgttTGTGATTGGGTGAGTGGTAAAGTGTGTGAtgtctgcgtctgtgtgtgtgtatatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtCTAAAACCCTT
>TU154021
tgagtACATGATATTAGTGCATCACTAATCTTTATTTCACAGCAAAAAGGTTTACATTTCAGAACTAGCTCATCAGCTAGTTCAGGCAGAGCAAACGTATTTCATCAAAACTCATCAACTGACACATTCCCTTTGTTTCAGTAATAAGAAGTCCATGAACAAGCAGAGCAAAAGCTCCCTAAATTTGAGATCCTTAGCATGTTTTGCAGTCATATTGGTATACTTTTACATGTCACAAGAGTCACATATAACTTGAACAAACTTGCTTTGCTGGCTAAGGCTATAAAAGACATTAGCAAAATAAAACCATAACTTAATGTAATATGAATGTGTCCTTCACATATTGCTTTTATTATATCTATCGAGGCTTTAGTTCTGTGTCCTCCACCTCTGTGATCTCCTCTACAGGCTCAGCTGATGGGGCAGGGTGGAAGAGAttaaatgtgtcatttttttccaGGAAATATTTGTACTTTGGCGGGGGGCAAGGAATCTGAGGAAACAAAACCTTAGATAccCTCTGATGGCGCACCAGCAGCAGCGCAGCCAGGAGGATCATGGGTATTCCAAGTGAAATTGAGATGATGACCAGAGTGTTGAGTTTGTAAAATGACCGTTTCACCgctacaaacagacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagacacacatacagacacacagaaacacacacacacacacagacaaacccaaacacaaatacaaatacaaacacaaacacaaacacaaacaaacacacacacatgcagttcATAGAGAAGCCATTTCAGTCCACGCTAAGTGATTTCCTGGCTGTTCAAACTTCCCCTTTTTTAATGGTACAGTAAATGATTTTGTGACTGACACATCTCAATGGGCATATAatcaaatacaaacaaacagcTTTTCTCATATTAGTCTTAATTCTCCTCTCGATTACATTTAATTGGGagtttacacacatacatacacatttcCACTACCTACAAAAACCTTTTAcattttccacacaaaaaagaacaaaagtaaaaagttaTTAGTGCTTTGGATTGTTAACACACTCAGCTCTcaaaaatgctaaataaataaacccatGATTAGCTATTCTAAGTATAGGCTTTATTAGAAATTAAATCTAACACAAAATCTGAAGCACTGTGATTGTAAATAGCATTACTAAGAAGCCGTTACCTCCTGCTGTCCGTCCACTCAGTCGCTGACTGTCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU154019 False 589 lncRNA 0.39 2 13197745 13223865
TU154021 True 1258 lncRNA 0.38 4 13219277 13223865

Neighbor

gene id symbol gene type direction distance location
tmbim1a tmbim1 coding downstream 1788 13186254 ~ 13195957 (-)
LOC120568263 LOC104953400 coding downstream 39455 13152095 ~ 13158290 (-)
LOC120568264 LOC104953400 coding downstream 46267 13132932 ~ 13151478 (-)
cfap410 cunh21orf2,LOC102788189 coding downstream 82456 13112363 ~ 13115289 (-)
xirp1 LOC104959684 coding downstream 253027 12931398 ~ 12944718 (-)
LOC120567607 LOC104935780 coding upstream 1032 13224897 ~ 13230904 (-)
LOC120568781 NA coding upstream 8231 13232096 ~ 13236247 (-)
sugt1 sugt1 coding upstream 65493 13289358 ~ 13310084 (-)
LOC120568165 LOC104935786,LOC103354355,LOC104967951 coding upstream 87936 13311801 ~ 13318339 (-)
ednrba ednrb,LOC103354354 coding upstream 102976 13326841 ~ 13333005 (-)
G114177 NA non-coding downstream 19994 13176803 ~ 13177751 (-)
G114129 col6a1,col6a2 non-coding downstream 30039 12953380 ~ 13167706 (-)
G114166 rpl37a,RPL37A non-coding downstream 80295 13114645 ~ 13117450 (-)
G114159 NA non-coding downstream 93348 13103242 ~ 13104397 (-)
G114130 col6a2,LOC105007837 non-coding downstream 102916 13091647 ~ 13094829 (-)
G114196 lect1 non-coding upstream 57066 13280931 ~ 13286164 (-)
G114199 NA non-coding upstream 62786 13286651 ~ 13287220 (-)
G114202 NA non-coding upstream 64317 13288182 ~ 13288993 (-)
G114215 LOC103354350,LOC100704451,LOC101473770,LOC106904511,LOC103151571,LOC106963118 non-coding upstream 170596 13394461 ~ 13406830 (-)
LOC120568710 NA non-coding upstream 309273 13533138 ~ 13549466 (-)
G114152 NA other downstream 109182 13084561 ~ 13088563 (-)
LOC120568578 wdr48 other downstream 222417 12966466 ~ 12975328 (-)
LOC120568934 LOC104956577 other downstream 429120 12760748 ~ 12768625 (-)
nedd8l LOC104931181,LOC104949953,LOC107384241,LOC103360313 other downstream 589176 12601180 ~ 12608569 (-)
G113805 NA other downstream 979478 12218062 ~ 12218267 (-)
dis3l2 dis3l2 other upstream 245666 13469531 ~ 13482225 (-)
tfr1a NA other upstream 726006 13949871 ~ 13968811 (-)
LOC120568687 NA other upstream 1389748 14613613 ~ 14618224 (-)
G114680 NA other upstream 1572053 14795918 ~ 14797044 (-)
mfsd8l2 LOC102304717,LOC102799006,LOC108238243,LOC103479065 other upstream 2066217 15290082 ~ 15304610 (-)

Expression


Co-expression Network