G114196 (lect1)


Basic Information

Item Value
gene id G114196
gene name lect1
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 13280931 ~ 13286164 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU154040
ctcacacagaaaacacagccACGCATACACTCAGATTTGCAGTGACAATCCGGGTCCCTCCGCTGTGACCCCGGCATCTGCTGCTGCCCGCACAGCTGTGAGAAACGCTCCTCAGCGAGAGCCTTCTCAGGTAGTCCTCCGATCTGAACGGACAGTCGTGAACGCTGCAGCGGGATGTAAActtaacagaagaagaaaagtgtgtGAGTTGGTCTGTGTGACTCACCTGATAGGGGTTCTCCGGGTTGAACTCTGCCTCcacgtcctcttcctcctcctccccggCTGCCTGGCGGCGCTGGCGGGGGGcagccctcctcttcctctgtccgcTGGTTGAGTAGGTGGGACGGAGCCAGAAGATTGGCAGGTCTCCACACAAGTCCTTTATCTTGTTGCTGAGGAAGGCGGAGTCCGAGAGGGGAGCGTCAGCCGCCACCCAGATCAGATCATCCTCAAATTTGGCCGGCATCACCTCATCCTCCAGGTCGAATGTCATCGAGTCCTTGTTGAGAGCCTCCACATCAGGCAGACGAGCCTTCGCTTGGGTCTTGATGTAGCACTTCTCTCCTCCTGAAAACCGGATCCCTGTGATCCCAATCTCAAAGTCGTGGACCTCCACGGCCTCATCCGCCCCGCTGCCGGTGCTGAATCTCTCCATGTTATTCGCCGTGTCAATCTCCATTGTACCCTCCTCCACTTTGCCATTGATGCTCATGCTGTAATGGACATTgtagacctacacacacacacacacacacacacacacacacacaca

Function

NR:

description
PREDICTED: leukocyte cell-derived chemotaxin 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU154040 True 778 lncRNA 0.56 4 13280931 13286164

Neighbor

gene id symbol gene type direction distance location
LOC120568781 NA coding downstream 44684 13232096 ~ 13236247 (-)
LOC120567607 LOC104935780 coding downstream 50027 13224897 ~ 13230904 (-)
LOC120568677 NA coding downstream 62861 13214880 ~ 13218070 (-)
LOC120568680 catip coding downstream 66641 13208030 ~ 13214290 (-)
casp8 NA coding downstream 73311 13196739 ~ 13207620 (-)
sugt1 sugt1 coding upstream 3194 13289358 ~ 13310084 (-)
LOC120568165 LOC104935786,LOC103354355,LOC104967951 coding upstream 25637 13311801 ~ 13318339 (-)
ednrba ednrb,LOC103354354 coding upstream 40677 13326841 ~ 13333005 (-)
LOC120568167 slc25a30,LOC106963122,LOC103151570,LOC107086856,LOC102233249,LOC100698510,LOC102198731 coding upstream 68065 13354229 ~ 13362042 (-)
LOC120568786 LOC104934149,LOC103354348 coding upstream 135384 13421548 ~ 13437449 (-)
G114183 NA non-coding downstream 57066 13197745 ~ 13223865 (-)
G114177 NA non-coding downstream 103180 13176803 ~ 13177751 (-)
G114166 rpl37a,RPL37A non-coding downstream 163481 13114645 ~ 13117450 (-)
G114159 NA non-coding downstream 176534 13103242 ~ 13104397 (-)
G114130 col6a2,LOC105007837 non-coding downstream 186102 13091647 ~ 13094829 (-)
G114199 NA non-coding upstream 487 13286651 ~ 13287220 (-)
G114202 NA non-coding upstream 2018 13288182 ~ 13288993 (-)
G114215 LOC103354350,LOC100704451,LOC101473770,LOC106904511,LOC103151571,LOC106963118 non-coding upstream 108297 13394461 ~ 13406830 (-)
LOC120568710 NA non-coding upstream 246974 13533138 ~ 13549466 (-)
G114247 anxa13,LOC105930306,LOC100703370 non-coding upstream 270440 13556604 ~ 13564803 (-)
G114152 NA other downstream 192368 13084561 ~ 13088563 (-)
LOC120568578 wdr48 other downstream 305603 12966466 ~ 12975328 (-)
LOC120568934 LOC104956577 other downstream 512306 12760748 ~ 12768625 (-)
nedd8l LOC104931181,LOC104949953,LOC107384241,LOC103360313 other downstream 672362 12601180 ~ 12608569 (-)
G113805 NA other downstream 1062664 12218062 ~ 12218267 (-)
dis3l2 dis3l2 other upstream 183367 13469531 ~ 13482225 (-)
tfr1a NA other upstream 663707 13949871 ~ 13968811 (-)
LOC120568687 NA other upstream 1327449 14613613 ~ 14618224 (-)
G114680 NA other upstream 1509754 14795918 ~ 14797044 (-)
mfsd8l2 LOC102304717,LOC102799006,LOC108238243,LOC103479065 other upstream 2003918 15290082 ~ 15304610 (-)

Expression


Co-expression Network