G114215 (LOC103354350,LOC100704451,LOC101473770,LOC106904511,LOC103151571,LOC106963118)


Basic Information

Item Value
gene id G114215
gene name LOC103354350,LOC100704451,LOC101473770,LOC106904511,LOC103151571,LOC106963118
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 13394461 ~ 13406830 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU154070
GCTTTATTGGAATACctaaaatggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtcacgtaCGTGTTCGGATGTGAAGAGGACAAGGCGAGGAGCCGCAGACATGCCCTTGGTCTTGACCTCGGGGAAATACTTGTAACGTGCCATCATCACACTGTACATGTTGGAGATAGCGCCCCCTGTTGAAGAGAGATGGACACATCAGCACCTTGAACAGCAGCATGGTAACTATACTCATTATACTGAttcaacacacaataacacacactcaATATGTTATATATAGACCAACCTGGTGAAAAGAGTCCATCTCCCTCTCCACCGGCCCAACCAATCATCTCTCTCATTTTCTTCAGAGTCAGCTGTTCCATCAACACAAACACTGGAGCGATCTCATAGGTGAACATGTTGGTGTTGGCGGTGGAGGTGAGCCACTCTCCGGCCAGACCGATGATGTCCAGACCAGAGGACAGCTGGTTGAAGAATCGTGGGTGAcCTGTCCGGACGCCATATTTGAGCGTGTCCCTGCAGTCCACCAGGATCTGCTCCAGGGATTCGGGCTGGTCAGACAGCTCCAGGTTGAAGCCCTCCATACCCTCCAGGAGCTGGTGGGGGTGGTGGAAGTCCAGCACCTTAGTGGAGCGGTCGAAAGTCTTCTTGACATAGTTGGTGAGGATGTCCACAATCTCCAACAAAAACTGAATAGTAGGCTCTTCTCCATTTTTGGCTGGCAGCAAGTCTCTGGCGAACAGATTGGAGAAGTCGGTCTCGGAGAGGCGGAAGCGCGCGTCCCTGTCACTGTTATCGCACGAGAGCAAGTTCTTCTGGCCCGCGAGCCTCCCCTTCTCGTCCAGGCTGTTGTTCTTCTGCAGGAACCTTGTGGACGGAGGTCTTAAATTGTCGGAGTTGGGGTCCTGGTCCCCGCCAGTGGCTCTCGGTTCAGACGTGGCCATCAGTCCTCTGTAATCTGATCTCCAGCTGGGAAATAATTCAACGACTCACGGGCGCACAGGTTGTCCAGTCCAGAGAAACTATAACTAGATGTTACAATTGCAACCCAAAGACACGACAAGGAACAGTCCAGTGATGGCGGAATACCAACAGAGCGCACTAATAAAATCCCATCCAGCGGCGCGCAAGTGACCCTTTCTCCCTCAAGAATATTTTTTATTCGTTATTTATATCTCAGGCTCTGGCTGCTCATTGGTCTCTTCACGCAAGCATGAGTCACAGCCTTGCCTCCCTCTGACGACTAAAG
>TU154071
ggaaaattTGTCGAAAACGTTTTCAAAACGCACGATTAAACCCCAGACAACGAAGGCGTTAATGTAAGAAAATATAGGGAAAATATTCAAACCAGGAATATATTCGATATGAACATGcatttttattcaaaaatattGGATCATTAAAAATACCAATGCTTTAACGGTGCATTATTTTTGCGCCAGGTCCACTGCTCGGTGCGCACCGCTGATCCGCCAGACAGCGACAGGCAGCTGTGATGGCTCTGTTTTTAACCGGAATGATTAACGACGGAGACCACACAGCAAATGGCCCGGGCGAGACTCGCTTTTatcagacagaggaggaggggagagagggacgGGGAggcagacagaggcagagagagagagagagagggttaaGCCTTCGTGTTGGCAATAGATCGCACTGGATGCATAAGTGtctttgagcaaggcaccgagtCCCGGTCAGCTCCAGTGGGCTGTTTCTGTAAGCACAGTCTGAACGCTCCGGAGAGGGACAGCCTTAACGAGAATTTACCCTCGGGGATCGATACTGGATTACGATATTATTAACAGGGAGAGGAGTGTGAGGAGGACGTACTTGTGGACGGAGGTCTTAAATTGTCGGAGTTGGGGTCCTGGTCCCCGCCAGTGGCTCTCGGTTCAGACGTGGCCATCAGTCCTCTGTAATCTGATCTCCAGCTGGGAAATAATTCAACGACTCACGGGCGCACAGGTTGTCCAGTCCAGAGAAACTATAACTAGATGTTACAATTGCAACCCAAAGACACGACAAGGAACAGTCCAGTGATGGCGGAATACCAACAGAGCGCACTAATAAAATCCCATCCAGCGGCGCGCAAGTGACCCTTTCTCCCTCAAGAATATTTTTTATTCGTTATTTATATCTCAGGCTCTGGCTGCTCATTGGTCTCTTCACGCAAGCATGAGTCACAGCCTTGCCTCCCTCTGACGACTAAAG
>TU154072
GTGGCATTCACAAACAATGGCACATATCCCTTCTGTTTAGCATCAATGATCTTGGCCTCCAGATCTGCAGGAATGACTCTCCCCctctcaTCTGTGCTCAACAGGATCACATTATCAGTGCCAAAACCCAGAGCAGCTCCAGCCTTCTTTATGGAGTAGTGGCTGTGTTCGGATGTGAAGAGGACAAGGCGAGGAGCCGCAGACATGCCCTTGGTCTTGACCTCGGGGAAATACTTGTAACGTGCCATCATCACACTGTACATGTTGGAGATAGCGCCCCCTGTTGAAGAGAGATGGACACATCAGCACCTTGAACAGCAGCATGGTAACTATACTCATTATACTGAttcaacacacaataacacacactcaATATGTTATATATAGACCAACCTGGTGAAAAGAGTCCATCTCCCTCTCCACCGGCCCAACCAATCATCTCTCTCATTTTCTTCAGAGTCAGCTGTTCCATCAACACAAACACTGGAGCGATCTCATAGGTGAACCTGTCAATCACATCACAAGATTTATAAATATAGAATCAAAGAAGAGTcttatgcatgcacacacttgCAGATAAGAAAGCCTAAATACAGAcacgccaacacacacacacacacacacactcaaactcaTTGGTTTTTCATTAGCCTAACATAATTCCATCCACAGAGCACAAACTGGAGCTTGTGCTGACTGGGCTAATTAAAAAGTGTCTGATAGGAGTCAGGCAGCAAACATTCAAATTCAAAGGCTTTCTGAAATCACTCAGTAGTTTAATTAAAGCCCACAAAGCTCTGATGGCTATCTGTCAATCCTGCCAATCTCAGCGGCGACTCTGAATGGGGCTGATTTGATGGCTGAGAGgacgtgaatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagagagagagagagagaggaagaaagaaagaaagactggCAGGGAGAGTGTTTTAAACAGATAACAGCCTCTGTTGACCCTAAA

Function

NR:

description
PREDICTED: glutamate decarboxylase 1-like isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU154070 True 1293 lncRNA 0.51 6 13394461 13406160
TU154071 False 967 lncRNA 0.49 2 13394461 13396368
TU154072 False 993 lncRNA 0.45 4 13405234 13406830

Neighbor

gene id symbol gene type direction distance location
LOC120568167 slc25a30,LOC106963122,LOC103151570,LOC107086856,LOC102233249,LOC100698510,LOC102198731 coding downstream 32419 13354229 ~ 13362042 (-)
ednrba ednrb,LOC103354354 coding downstream 61456 13326841 ~ 13333005 (-)
LOC120568165 LOC104935786,LOC103354355,LOC104967951 coding downstream 76122 13311801 ~ 13318339 (-)
sugt1 sugt1 coding downstream 84377 13289358 ~ 13310084 (-)
LOC120568781 NA coding downstream 158214 13232096 ~ 13236247 (-)
LOC120568786 LOC104934149,LOC103354348 coding upstream 14718 13421548 ~ 13437449 (-)
LOC120568580 LOC102206875 coding upstream 33859 13440689 ~ 13465710 (-)
si:ch211-252f13.5 LOC104963693,LOC102078510,LOC102307931,LOC101471818 coding upstream 162519 13569349 ~ 13575574 (-)
LOC120568814 LOC106928308,LOC103129201,LOC107086848,LOC103354342,LOC101170217,LOC106961870 coding upstream 188348 13595178 ~ 13619698 (-)
LOC120567843 ptchd3,LOC103354362 coding upstream 233692 13640522 ~ 13644542 (-)
G114202 NA non-coding downstream 105468 13288182 ~ 13288993 (-)
G114199 NA non-coding downstream 107241 13286651 ~ 13287220 (-)
G114196 lect1 non-coding downstream 108297 13280931 ~ 13286164 (-)
G114183 NA non-coding downstream 170596 13197745 ~ 13223865 (-)
G114177 NA non-coding downstream 216710 13176803 ~ 13177751 (-)
LOC120568710 NA non-coding upstream 126308 13533138 ~ 13549466 (-)
G114247 anxa13,LOC105930306,LOC100703370 non-coding upstream 149774 13556604 ~ 13564803 (-)
G114256 LOC102077222,LOC102776852 non-coding upstream 216073 13622903 ~ 13625479 (-)
G114257 NA non-coding upstream 218946 13625776 ~ 13628667 (-)
LOC120567953 NA non-coding upstream 535225 13942055 ~ 13948115 (-)
G114152 NA other downstream 305898 13084561 ~ 13088563 (-)
LOC120568578 wdr48 other downstream 419133 12966466 ~ 12975328 (-)
LOC120568934 LOC104956577 other downstream 625836 12760748 ~ 12768625 (-)
nedd8l LOC104931181,LOC104949953,LOC107384241,LOC103360313 other downstream 785892 12601180 ~ 12608569 (-)
G113805 NA other downstream 1176194 12218062 ~ 12218267 (-)
dis3l2 dis3l2 other upstream 62701 13469531 ~ 13482225 (-)
tfr1a NA other upstream 543041 13949871 ~ 13968811 (-)
LOC120568687 NA other upstream 1206783 14613613 ~ 14618224 (-)
G114680 NA other upstream 1389088 14795918 ~ 14797044 (-)
mfsd8l2 LOC102304717,LOC102799006,LOC108238243,LOC103479065 other upstream 1883252 15290082 ~ 15304610 (-)

Expression


Co-expression Network