G114429


Basic Information

Item Value
gene id G114429
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 14314303 ~ 14314633 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU154334
ATGATAATCTCAGACTTGGTAGAAGAAGATGATTCTGATGGTTTTGTGTGGCACATCAACTTGTTGCCTAAACATATGCTGTCATCACACAAAACAAATCTCTTCAATATACAGGCTACATGTTTTCTCTTCAGTAAACCATAAACTCTGGCATATCTTCATTTGCACTCTCATAACTTCCTCTCTTTGCCTAACCATGGCCTAGTCATTTGATTcaccttaaaaaaaattttCCACTGTCATGCTACATTAGCAAAATGTAAAGGAAAAACTGGACATACTGTTTGTCTTTAGTAATCCCTTAGCGTAGTCAGTCGTGTTTTACTAGTTG

Function

GO:

id name namespace
GO:0004112 cyclic-nucleotide phosphodiesterase activity molecular_function
GO:0004114 3',5'-cyclic-nucleotide phosphodiesterase activity molecular_function
GO:0008081 phosphoric diester hydrolase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU154334 True 331 lncRNA 0.36 1 14314303 14314633

Neighbor

gene id symbol gene type direction distance location
LOC120568001 jun,LOC104967900 coding upstream 54615 14257559 ~ 14259688 (+)
LOC120567998 prdx6,LOC101487422,LOC103365780 coding upstream 76180 14235127 ~ 14238123 (+)
LOC120567821 LOC101487896,LOC103365967 coding upstream 86637 14225001 ~ 14227666 (+)
c8a NA coding upstream 258781 14049498 ~ 14055522 (+)
rgs11 rgs11 coding upstream 320705 13985299 ~ 13993598 (+)
mgst3a mgst3 coding downstream 4042 14318675 ~ 14321387 (+)
LOC120568146 LOC103364811,LOC100690866 coding downstream 15958 14330591 ~ 14340646 (+)
LOC120568347 NA coding downstream 126236 14440869 ~ 14454235 (+)
tmem125b LOC103364166,LOC104960834,LOC100711868 coding downstream 234734 14549367 ~ 14551031 (+)
slc1a7a slc1a7,LOC102202224,LOC106935810,LOC103140015,LOC108238248,LOC103363977 coding downstream 261721 14576354 ~ 14618876 (+)
G114428 NA non-coding upstream 288 14313602 ~ 14314015 (+)
G114406 NA non-coding upstream 80091 14191963 ~ 14234212 (+)
G114398 NA non-coding upstream 139718 14173992 ~ 14174585 (+)
G114376 NA non-coding upstream 257851 14055693 ~ 14056452 (+)
G114371 NA non-coding upstream 274067 14038682 ~ 14040236 (+)
G114488 NA non-coding downstream 23189 14337822 ~ 14341341 (+)
G114550 NA non-coding downstream 243732 14558365 ~ 14560677 (+)
G114561 NA non-coding downstream 311534 14626167 ~ 14626770 (+)
G114585 NA non-coding downstream 378933 14693566 ~ 14693902 (+)
G114650 NA non-coding downstream 497029 14811662 ~ 14812209 (+)
LOC120568245 LOC103365337,LOC101481118,LOC102206401,LOC102290843 other upstream 18310 14287150 ~ 14295993 (+)
si:ch73-71c20.5 NA other upstream 1127939 13183284 ~ 13186364 (+)
ndufb3 ndufb3 other upstream 1188840 13123030 ~ 13125463 (+)
rpl37a rpl37a,RPL37A other upstream 1196947 13114596 ~ 13117356 (+)
col6a1 col6a1 other upstream 1239709 13010575 ~ 13074594 (+)
rgs18 rgs18,LOC106918816,LOC103139989,LOC103479038 other downstream 671144 14985777 ~ 14993083 (+)
ro60 trove2 other downstream 699110 15013743 ~ 15026208 (+)
G114789 NA other downstream 837163 15151796 ~ 15157199 (+)
LOC120568540 LOC108238308,LOC100706341,LOC103359463,LOC106530177,LOC102798013,LOC101474556,LOC102303803 other downstream 1023924 15338557 ~ 15368780 (+)
asip2b agrp2,LOC105941385,LOC102299529,LOC102795060,LOC103358555 other downstream 1158069 15472702 ~ 15478462 (+)

Expression


Co-expression Network