G114488


Basic Information

Item Value
gene id G114488
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 14337822 ~ 14341341 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU154433
agtgtgtgtgtgtgtgtgtgtgtgtgtgtgTGTTACATTATATAGCTTATAACTCTACATGTATACTTctgctaatatataataaaaacaacttccTCACTTCCACAACAGAAAAAGAGAACAAGACCgtctttttttaagcagacaacGTGTCCTGGCAATAGACtgcttgttttttgtgtttatcAGTGACGTCACTGTGAGAGATGGCAGTTGTTGGAAGTTGGGGCCGCGCCCTCTGTAGAAAACGTGGATTTGAGGAGGGCTGTAGTGGTGACTGGTGCACTGAGATGAGAGGACTCTATGGGCTAGTCTGTGAGTGCTGTTGGTGACTCTGTGCATTTTAACCACAGCTCAGTAGGCTCCTCCTGAAACCAGTCCTGACCCGGGCTGCTCGCTATCGTATTCTTGTGAAGAGATTCAGCACGGACTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU154433 True 434 lncRNA 0.45 2 14337822 14341341

Neighbor

gene id symbol gene type direction distance location
mgst3a mgst3 coding upstream 16435 14318675 ~ 14321387 (+)
LOC120568001 jun,LOC104967900 coding upstream 78134 14257559 ~ 14259688 (+)
LOC120567998 prdx6,LOC101487422,LOC103365780 coding upstream 99699 14235127 ~ 14238123 (+)
LOC120567821 LOC101487896,LOC103365967 coding upstream 110156 14225001 ~ 14227666 (+)
c8a NA coding upstream 282300 14049498 ~ 14055522 (+)
LOC120568347 NA coding downstream 99528 14440869 ~ 14454235 (+)
tmem125b LOC103364166,LOC104960834,LOC100711868 coding downstream 208026 14549367 ~ 14551031 (+)
slc1a7a slc1a7,LOC102202224,LOC106935810,LOC103140015,LOC108238248,LOC103363977 coding downstream 235013 14576354 ~ 14618876 (+)
aldh9a1b LOC103363560,LOC101480450 coding downstream 326040 14667381 ~ 14674289 (+)
LOC120567643 nasp,LOC106919017,LOC106954312,LOC103140078,LOC102234216,LOC103479004,LOC103399366 coding downstream 346421 14687762 ~ 14692836 (+)
G114429 NA non-coding upstream 23189 14314303 ~ 14314633 (+)
G114428 NA non-coding upstream 23807 14313602 ~ 14314015 (+)
G114406 NA non-coding upstream 103610 14191963 ~ 14234212 (+)
G114398 NA non-coding upstream 163237 14173992 ~ 14174585 (+)
G114376 NA non-coding upstream 281370 14055693 ~ 14056452 (+)
G114550 NA non-coding downstream 217024 14558365 ~ 14560677 (+)
G114561 NA non-coding downstream 284826 14626167 ~ 14626770 (+)
G114585 NA non-coding downstream 352225 14693566 ~ 14693902 (+)
G114650 NA non-coding downstream 470321 14811662 ~ 14812209 (+)
G114745 NA non-coding downstream 723749 15065090 ~ 15065393 (+)
LOC120568245 LOC103365337,LOC101481118,LOC102206401,LOC102290843 other upstream 41829 14287150 ~ 14295993 (+)
si:ch73-71c20.5 NA other upstream 1151458 13183284 ~ 13186364 (+)
ndufb3 ndufb3 other upstream 1212359 13123030 ~ 13125463 (+)
rpl37a rpl37a,RPL37A other upstream 1220466 13114596 ~ 13117356 (+)
col6a1 col6a1 other upstream 1263228 13010575 ~ 13074594 (+)
rgs18 rgs18,LOC106918816,LOC103139989,LOC103479038 other downstream 644436 14985777 ~ 14993083 (+)
ro60 trove2 other downstream 672402 15013743 ~ 15026208 (+)
G114789 NA other downstream 810455 15151796 ~ 15157199 (+)
LOC120568540 LOC108238308,LOC100706341,LOC103359463,LOC106530177,LOC102798013,LOC101474556,LOC102303803 other downstream 997216 15338557 ~ 15368780 (+)
asip2b agrp2,LOC105941385,LOC102299529,LOC102795060,LOC103358555 other downstream 1131361 15472702 ~ 15478462 (+)

Expression


Co-expression Network