G114530


Basic Information

Item Value
gene id G114530
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 14418851 ~ 14466248 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU154487
aaacacacacacacacacacacacacacacacacacacacacacacgaatgcatgcacacattcacaaaaGCAAGCTGGATTCCCCTCCTCCTGAGATGGCCGATATCTGAGCAGACAGTTTTGGATAGTGCCATGTGGGAGGGCCCAGCTGGTGGCTGCATGATGAAAAAGACCCGTCATGTGAtgtaacagaaaacaaaaatctgACTCTGATGTAATGAGGTTAAGACCAACTTGTCCTATCAGTGAACATGTTTCATGCTGGTTTAGTCACATCATtaactgtctttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcatgttcatCATTATGCATGTGAGTGCTAATGTTCATCCCACAGCCATATTTGAACTGTTTGTATGCTCTTTGTTGCACAACCCTCTTAGAATGCCTTCTGTATTGTGTATTGCATGGAAGAAAACAGTGTGTGAAGGTGTTTAGatacacaggtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgtgtgtgcgcgcaaCAGTGTGTGACACTGGAGAAGCTTTGAGGGTGCTTTTTGATTCATTGATTTGTAAATATGTTTTCATAAGGTTTTTGATAATGTATTATACAATTATGTAAAAGAGAAGATGTACATAAGATTTTAGATAAAGTGTTAACAGgtatattaatttatttgtatacAAGGAGAGCACTGCATTCCCTGATTGTAAGAAATCAGAATTATCCACCAAAGTGGTTTGTGTTGTTTCTTGCTGTGCACCATTTAGCATCCTTTCTGTGTGTGACCCTTTTTTCTTTGGTAGACCACGTAAAACATGATGTCCCCTCCCGAAAAAACGCTTCCCAACCTTGGTGTTAATGAGATGattgatttttgtttatttgtgcctttttgtttacttttttgttCTGTAAGTTTTTTCATGAAAAGGACAGGGATAAGGCATCTACTGTACATGCAAAGATAAACTGTATGAAGACCAAACTGGTTCCACTTTTTGATTTTCTGTAATGGA
>TU154488
ggggaaGATGGCCgctcaggcacacgcacacacagtgagGTCACGGGTGACTTGGACTGAGTTTGCTGAAGGTACGAACAACATATCATAAAGTATTACATGCAGCCATTTACAGACATGTCCTATGCCAATTTCCATTTCAAAAACAGCAGAATTAATAAGACTAACATGATTCTTTGAAAAATCCTTTCTACCTTTTCTGTGCTGGAGCTGGATCTACTTTTTTCTCCAGTAAGAATTATTTACAGaattattagtgttatgtgTTCCCAACATTGACCTAAACTAGAATATGGAGTCAGACTGGTTCCTGTTTTTGAGTCTTTTGCATTGATAACTTGAGTgaggtgtgtgtgctgtgtgtcccATATTTTGTGACGGGGCTGGTGAGAGGTTCTGtttaatatgtattaatttggGCTTTGTGGTTATTCCTGGTGGGCTGTAGAGCTCTGGGAACACTGTTTAGGAAGGAGGAGCTCTGAAACTGGGACAGCAACTGCGTTGATGGGACAATCTGTACAGATTCATGTTAGAATCAATCACAAATCTCATAAATGTCATTACTGGAGCTGTCTTTTATAGTTTTCCTGGAtgggttttctttaaaaaaaaaaaggttccatTCTGATTGATTTTAAAGAAAGGTTACCACCCACATGATGTGCTTTCTCTCTGGTTCAGAGGCAAACATTTTAAGAGTGAGTTGTCTAACATTTCGTCGTGCAGTTTTTATTTAACCTCCAACATCCCAGAGTTGTGGGAGAGCAGATTTGCGGAGTGGAAAGGAGAAAATTGAGACATATAAGTATTTAGACCTATGAACAGAGGATGTGAGGTTAGGTGGAAGTGAATTTTGCGCAGGAGTTGTGTCTTATTGTGACTTGTTTAGATGTTAAATGGTTTGAGAAAAGCAATAGACTCTAGCTTTTAGTCAGGCTGCAGTGTTTTGTGGTTGACAAGTGTTAAGAATTTTATTTGATCACCTGCTTTTGACTGTGACAAATGCGCACATAAATACACACGGGGTGCAGTGATAGCAAATTCACGCTGCTCTCCAGAGGACGGAGACAATGTGCACTTGCCCTCCGAAAACACAAACAGCATGCATAATTGCTCACCAGCTGACAATGCAGCCATTCATTGTTCCaggcaaaaaacacacacacaaacacacacacacacacacacacacacacaaatacacacacacacacacacacac

Function

GO: NA

KEGG:

id description
ko05110 Vibrio cholerae infection
ko05323 Rheumatoid arthritis

RNA

RNA id representative length rna type GC content exon number start site end site
TU154487 False 1102 lncRNA 0.40 3 14456624 14466248
TU154488 True 1225 lncRNA 0.41 2 14418851 14458925

Neighbor

gene id symbol gene type direction distance location
LOC120568103 pde4b,LOC104954895,LOC101483836,LOC100690322,LOC102791018 coding downstream 4151 14355617 ~ 14414700 (-)
fzr1b LOC104927424,LOC102292505,LOC103364951,LOC102791500,LOC101485033 coding downstream 69292 14339669 ~ 14349559 (-)
LOC120568148 NA coding downstream 88260 14321679 ~ 14330591 (-)
LOC120568246 lrrc52,LOC102792645 coding downstream 106041 14304478 ~ 14312810 (-)
angptl1b LOC103365434,LOC104967899,LOC101486078 coding downstream 134132 14273842 ~ 14284719 (-)
LOC120567737 NA coding upstream 84789 14551037 ~ 14553669 (-)
LOC120567803 LOC104934906,LOC103364073,LOC103479012 coding upstream 95259 14561507 ~ 14564705 (-)
scp2a scp2 coding upstream 159919 14626167 ~ 14651376 (-)
czib LOC103363808,LOC100704007 coding upstream 187160 14653408 ~ 14658272 (-)
uck2b LOC104935075,LOC103363741,LOC102787436,LOC100703739,LOC101481213 coding upstream 192624 14658872 ~ 14667205 (-)
G114518 NA non-coding downstream 98088 14319343 ~ 14320763 (-)
LOC120568036 NA non-coding downstream 247377 14124703 ~ 14171474 (-)
G114456 c8a non-coding downstream 363328 14049494 ~ 14055523 (-)
LOC120567953 NA non-coding downstream 470736 13942055 ~ 13948115 (-)
G114257 NA non-coding downstream 790184 13625776 ~ 13628667 (-)
G114544 NA non-coding upstream 51228 14517476 ~ 14517893 (-)
G114633 NA non-coding upstream 223209 14689457 ~ 14690066 (-)
G114636 NA non-coding upstream 227384 14693632 ~ 14693957 (-)
G114661 NA non-coding upstream 284997 14751245 ~ 14751528 (-)
LOC120569096 NA non-coding upstream 314028 14780276 ~ 14782472 (-)
tfr1a NA other downstream 450040 13949871 ~ 13968811 (-)
dis3l2 dis3l2 other downstream 936626 13469531 ~ 13482225 (-)
G114152 NA other downstream 1330288 13084561 ~ 13088563 (-)
LOC120568578 wdr48 other downstream 1443523 12966466 ~ 12975328 (-)
LOC120568934 LOC104956577 other downstream 1650226 12760748 ~ 12768625 (-)
LOC120568687 NA other upstream 147365 14613613 ~ 14618224 (-)
G114680 NA other upstream 329670 14795918 ~ 14797044 (-)
mfsd8l2 LOC102304717,LOC102799006,LOC108238243,LOC103479065 other upstream 823834 15290082 ~ 15304610 (-)
G115164 btf3l4 other upstream 1677912 16144160 ~ 16148121 (-)
cc2d1b cc2d1b other upstream 1716406 16182654 ~ 16201698 (-)

Expression


Co-expression Network