G114538 (LOC104949927,LOC103364340)


Basic Information

Item Value
gene id G114538
gene name LOC104949927,LOC103364340
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 14440881 ~ 14447933 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU154504
CTCCATGCTGAATCCTCTCTCCATCACTGTGTCCATGCTGGGTATAGTAGGAGGTAAGGATGTCTACGAGTCCCATCATCTCCTGCTGCAGGGAGTTGACTTTAGGGTCTGGGTGCTTTAGAGGTTTACCCTCCTCTCCTGACTCGTGGtctgcacacaaacactcccACTGCTGATCCAGAAGCCTCTTGATCTTCTTTATGTGGTGGACCACTACTTCTGTTTCATCTGAAGCGTCTCCAGCTTCCACAGACACTAGCGGCTCTTGACTTCTTTGTCCATTTGTGGTAACAGGTCTTGCATCTGGACTTCTGGACACTTTATTATTTGGTTCAATGGACCTCACCGCTGTCTCATCTCCATCCTGGTCTACCACCACCCTCTCTGCACGGACCCACACCGCAGGATTCCTGATAAGGTGCTCCATCTTCTCATCTTTCCTTCTgctctcctcctgctgctccctCAGCAGCCCTAAGGTCCTCTGAAGCTCCAGGCCAGTCTCATGGAGCTTCTGCTCCAGCACAGCTACCTTAGCCTGCAGCGACGTCACCGTCAGCAGCTCATCCAGATCTGTACTAGTCCTCCACTCGTGTGTGGGATTAGAGTCTTCTTGACTGACGCTGTGATTTCTAGGAAACATGATGTGACTTTCATGCCGAGGCCTTTTGCTGTCCACTGTGCCGTAGTGGGATGAGGTGTAAGGGTCTGTGGTTCCATTCATTGAGGGAGGTGGCATATGTGGATTCAGGCCCAGACGGAGCCTTTCTCTTTCCTCCTGGAGGATGCAGATATGCGCCCTGAGCTCTGGAATCACCCTCATCTCCATCTCCAGCTCCCCCACACGTTCGAGGGCCTCTGTCAGGCGCCTCAACAGGCCTGAGCAATCCTGGGGTCGAGGGCTGTCCGGTAAGTAGAAGACGTCTTCACAGGATGTGATTCTTTCTTCAAGGTGATCCCTCGAACTCCGAAGGCTGCCGGGGTCGTCTGTGGACTCTGATCCTTGTCTCAGTAATACTGTGAGTGGCATACTGGAGGCACGCAGGAGATGAGGTCTGATGTGCTCACCGAGAGGTTGCTCATCAAACTCCTTGATTCTGGCCTCCATGTCTGCCAGGGATCTGAGCCCTGTGGGAGAAAGTTGCGACCTGTGATCATCATTTGCCCAGGAAGTGTAGCCATGGTGATGACCGTCTGACAGTCGGGACCTAGGGCCAAGAGCTCCAGTAGATCCCCAGGGGCTCGAGCGGTAGCCAGACCCAGAAGGGTTGAGGTGCCTGGGAAGAGTGCTGGCTCTGGGGCCTTTGCTTCGGCGCTGGATGGGTACTCTTTTGATTGTGTTGCCTTTCTCTATGTCATCTACGTATTTTAGGAAGTCCAGGTCAAGTCGAAAGCCATAAGGGGTTTCCACGGAGTACGGGGGCTTCCCTTTGATTCCATTCTTTTTTACCGTTTTGTCCTTCCATCACTTTTTTGTCATCAGTCGTTCAAACAATTTGTTGCCATATTATCTGGTTGGATCTTTGGTGtTGGTGACATGTGTTCAGCAGTTTTCTCCACTTTGTCTTGCTGATGTGAGGGCGTGTTTGTCAGACAGTCCACTACAGTCTGCTCTCAGCTCAGTTCAgcctgtctgtccgtctgtctttcTCCTGAGAAGGCAGGGACGTGCTGTCAGGGAGAGTGGCATGCCGCGGCTGTTTGGTAAATGCCAATGTGCAGCCCTTGCCATAACAGAAGCTGGGTTTGcttgtgtgtgaaagagagcaCGGAGCAGGGAGGGGCATGTGAGCAAGCCTTCCT

Function

NR:

description
PREDICTED: KN motif and ankyrin repeat domain-containing protein 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU154504 True 1803 lncRNA 0.53 3 14440881 14447933

Neighbor

gene id symbol gene type direction distance location
LOC120568914 LOC104950559 coding downstream 4675 14430089 ~ 14436206 (-)
LOC120567626 LOC103364420,LOC104948953 coding downstream 11323 14422482 ~ 14429558 (-)
LOC120568976 leprot coding downstream 20684 14416830 ~ 14420197 (-)
LOC120568103 pde4b,LOC104954895,LOC101483836,LOC100690322,LOC102791018 coding downstream 26181 14355617 ~ 14414700 (-)
fzr1b LOC104927424,LOC102292505,LOC103364951,LOC102791500,LOC101485033 coding downstream 91322 14339669 ~ 14349559 (-)
LOC120568348 lrp8 coding upstream 13539 14461472 ~ 14537465 (-)
LOC120567737 NA coding upstream 103104 14551037 ~ 14553669 (-)
LOC120567803 LOC104934906,LOC103364073,LOC103479012 coding upstream 113574 14561507 ~ 14564705 (-)
scp2a scp2 coding upstream 178234 14626167 ~ 14651376 (-)
czib LOC103363808,LOC100704007 coding upstream 205475 14653408 ~ 14658272 (-)
G114518 NA non-coding downstream 120118 14319343 ~ 14320763 (-)
LOC120568036 NA non-coding downstream 269407 14124703 ~ 14171474 (-)
G114456 c8a non-coding downstream 385358 14049494 ~ 14055523 (-)
LOC120567953 NA non-coding downstream 492766 13942055 ~ 13948115 (-)
G114257 NA non-coding downstream 812214 13625776 ~ 13628667 (-)
G114544 NA non-coding upstream 69543 14517476 ~ 14517893 (-)
G114633 NA non-coding upstream 241524 14689457 ~ 14690066 (-)
G114636 NA non-coding upstream 245699 14693632 ~ 14693957 (-)
G114661 NA non-coding upstream 303312 14751245 ~ 14751528 (-)
LOC120569096 NA non-coding upstream 332343 14780276 ~ 14782472 (-)
tfr1a NA other downstream 472070 13949871 ~ 13968811 (-)
dis3l2 dis3l2 other downstream 958656 13469531 ~ 13482225 (-)
G114152 NA other downstream 1352318 13084561 ~ 13088563 (-)
LOC120568578 wdr48 other downstream 1465553 12966466 ~ 12975328 (-)
LOC120568934 LOC104956577 other downstream 1672256 12760748 ~ 12768625 (-)
LOC120568687 NA other upstream 165680 14613613 ~ 14618224 (-)
G114680 NA other upstream 347985 14795918 ~ 14797044 (-)
mfsd8l2 LOC102304717,LOC102799006,LOC108238243,LOC103479065 other upstream 842149 15290082 ~ 15304610 (-)
G115164 btf3l4 other upstream 1696227 16144160 ~ 16148121 (-)
cc2d1b cc2d1b other upstream 1734721 16182654 ~ 16201698 (-)

Expression


Co-expression Network