G114550


Basic Information

Item Value
gene id G114550
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 14558365 ~ 14560677 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU154518
ggtcatactcagattctacttcccgacctcgaatgttgtgggcggggctaagttcggctggtaTCCAGGCTATCAAAATCCTGCACTTCACACGCAAATAATATGAGCTGTAACGTGTTTGTTGCATTTCCATTACATGACAGCATCACTGCATAATAATCAGGTTTCATCTTTTGATTCAGATTTTATTGATTCTCTTTCAAGAAGGGTGTCAATAAACCATTATGTACATTCAGGAAATGTGTTTGAAAGATGGCCAACAAACATAAGTACATCAAAAGAAACTGAGCCCTCAGTCTTGTTTTCCTCTTACATTCACCGAAAATGTACAGTTGATTACCAAGCACAGCTTTGTGCTGACAATTAAGAATGACAAATTATATTCATCAACATACTGTAATACATGAGTAAAACAGAAACGTCATTCCACCAAACCTTTGACAAACATGCCAGCAGCTTATAGTTTGTAAAATTGTATAACTTGTACACACATTTATGAACATACTGTTAAATGAGGCCTTTTCTACTTAGCTTCTACtctacttttgtttttgcagcaCATTTTAACAGAGAAAATAACAGACTGTGGACAGTGTTGACCTTTAAAAATTGATACATAAAACAATTACACAAGCAAAATGCATTCACCAACACAAGGCATGAATATTTTGCATGAATTTATAAATACTTAAGCTACCGTTCTGAGTTACAAAAACAAGGGCACTTGAAAGTTTTAAGAAGGAATTGACTATCCAGTAGATACAGAGAATATGTGCAAGTGGGCCACAAGCATGCAGTTTTGTGATCTCTTATGTAGGCCTTTCTACATAGAGTAACACTGCGAAGCAATCAAAACTCTTCAGACAAAAGCTAAAACGCTGGTGCAACATTTAACGATGTTGCAAGTTGCAGTGTCTAGTCCacatcctcgacgttccacttccgggattgatccgttgccgacggaaattccgccggatttcactcatttaggccagatatccgttgccttgggcttcctttgtgttggcattttaaactccggtcgatttatgaggactatggttaaccttttctcagatctctgcagggtaaatccagacagctagctagagtaTCTGTCCaatttctgttgcacgactagaACAAACTTTGaacacacatgttccaccaaaacaagttccttcccgaggctatttttcaACGGTACTGCGGCTTTTCCCGGTGcctagcaccacccaagacgattgtgattggtttaaagaaatgccagtaaaccacagcacgtttttctctcatcccagaatgctgtgtggaccagaACCTTCTCTGCATAGCtgcggtggaggaaggtctggcaatgcgagactatgcaGTGTCATACTGCCATTATGTAAGGATGGATGTAAAACATGTAATCCAAATGTACTGTAAATTTGATAAGACGGATGACAAGTTAGTCAGTTACAGTTAtttatttctcacttaaaagtAATAAAGGATAGattcacattttttaaaacagtaCTGAACATGCCCAAGTCAGAATTGAAAGTAGATGAAAGCATCCTTTAAGTTGGTCAGTTTGGAATCATTGAAATAAAGGAGAATGAAAAAAATGTCTTCAGCTCAGTGGCACAGTGGTCAGAAAGCTTTGTGTTTGTCCTGAAAACTCCATCTTTATACTCATATTCAAAGTATATCAGTAGCCTTGGTAGGCagtagtaaagaaatgggagcgagagctgagcccggaggggaatgtaattaattgggagacagtttgggacaacatttcccactgttccaagaacccaaatcaccagcagatccacttcaacatatgccataggacatattggactcctcagaagagatacgtctccaaaggcattcctactccctattgcactttctgccaacctgaacagactggaactttcctgcacatggtctaggagtgtgaacaggtgtaTGAGTTTTGGagtaaaacaacatcaataatatctgatgtgatagaatgtcgacttcctactgacccgattgttttgttacttaatgacgactctaaattacacctgcttgggagacagaagaaagtttGGTTAGCTGGCTCAAccgcgaccaagaaaatgatagctcagcgctggctcccccccccccctcactcgctttgtataaaacagtggttagcctattttctggacatagacctatagacctatggaaaggtgcagcagcacaggtatcagtcctaatgacctcagcatcacaataACTAGAGGAGGGTGACTGGGCAAGGtctgatttctg

Function

NR:

description
PREDICTED: regulating synaptic membrane exocytosis protein 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU154518 True 2313 lncRNA 0.41 1 14558365 14560677

Neighbor

gene id symbol gene type direction distance location
tmem125b LOC103364166,LOC104960834,LOC100711868 coding upstream 7334 14549367 ~ 14551031 (+)
LOC120568347 NA coding upstream 104130 14440869 ~ 14454235 (+)
LOC120568146 LOC103364811,LOC100690866 coding upstream 217719 14330591 ~ 14340646 (+)
mgst3a mgst3 coding upstream 236978 14318675 ~ 14321387 (+)
LOC120568001 jun,LOC104967900 coding upstream 298677 14257559 ~ 14259688 (+)
slc1a7a slc1a7,LOC102202224,LOC106935810,LOC103140015,LOC108238248,LOC103363977 coding downstream 15677 14576354 ~ 14618876 (+)
aldh9a1b LOC103363560,LOC101480450 coding downstream 106704 14667381 ~ 14674289 (+)
LOC120567643 nasp,LOC106919017,LOC106954312,LOC103140078,LOC102234216,LOC103479004,LOC103399366 coding downstream 127085 14687762 ~ 14692836 (+)
LOC120567645 tmem69,LOC102301864,LOC101478278 coding downstream 147836 14708513 ~ 14709821 (+)
sgip1b sgip1,LOC104955871,LOC102197882 coding downstream 192265 14752942 ~ 14774303 (+)
G114488 NA non-coding upstream 217024 14337822 ~ 14341341 (+)
G114429 NA non-coding upstream 243732 14314303 ~ 14314633 (+)
G114428 NA non-coding upstream 244350 14313602 ~ 14314015 (+)
G114406 NA non-coding upstream 324153 14191963 ~ 14234212 (+)
G114398 NA non-coding upstream 383780 14173992 ~ 14174585 (+)
G114561 NA non-coding downstream 65490 14626167 ~ 14626770 (+)
G114585 NA non-coding downstream 132889 14693566 ~ 14693902 (+)
G114650 NA non-coding downstream 250985 14811662 ~ 14812209 (+)
G114745 NA non-coding downstream 504413 15065090 ~ 15065393 (+)
G114746 NA non-coding downstream 505446 15066123 ~ 15066439 (+)
LOC120568245 LOC103365337,LOC101481118,LOC102206401,LOC102290843 other upstream 262372 14287150 ~ 14295993 (+)
si:ch73-71c20.5 NA other upstream 1372001 13183284 ~ 13186364 (+)
ndufb3 ndufb3 other upstream 1432902 13123030 ~ 13125463 (+)
rpl37a rpl37a,RPL37A other upstream 1441009 13114596 ~ 13117356 (+)
col6a1 col6a1 other upstream 1483771 13010575 ~ 13074594 (+)
rgs18 rgs18,LOC106918816,LOC103139989,LOC103479038 other downstream 425100 14985777 ~ 14993083 (+)
ro60 trove2 other downstream 453066 15013743 ~ 15026208 (+)
G114789 NA other downstream 591119 15151796 ~ 15157199 (+)
LOC120568540 LOC108238308,LOC100706341,LOC103359463,LOC106530177,LOC102798013,LOC101474556,LOC102303803 other downstream 777880 15338557 ~ 15368780 (+)
asip2b agrp2,LOC105941385,LOC102299529,LOC102795060,LOC103358555 other downstream 912025 15472702 ~ 15478462 (+)

Expression


Co-expression Network