LOC120568687


Basic Information

Item Value
gene id LOC120568687
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 14613613 ~ 14618224 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU154601
CGGACGCAATGGTCACAAAGGAGAAGAGGAATCGGAatcacattcatttttaatttgcaTAATTGCATATATCTTTCATACAAAAAGCTTATTTCCAAGGTTGGATAGGGACATAATTTGTGGAAAAGTTAATGCATGGATAATAGACTTCTGTCACAGTGGCAGAAGTGATGAAATGGCACAAAGGCATGTAACAGTAATAACTATGAAGATGAAATGTGTCtctctagatagatagatagatagatattaatCCTGTTGTCTTGATCAAATGAAATCAGTTTTTAACCATAACAGATGTTTTGTTTACAGTGAACTCTAATATGATCTAAAATGACTGCTGGTAAGGTAGGACACATATAAGGGGATTTTTGGGGAAAACTTTAGTtaaatgagaagactgatactACTGCCATGCCTGTGTGTCATTCAAGGTTGTAGCATCAACCACTTTTCTGTCTTTCAAACTAAGATGACAATTTATTGACACACAGAAGTCTAGACAACAAATGAATACATTGATTGTTTTTGGCCTTGTAGGCTCTCACCTGCTCCCCTTCTTTGACAAAATCTTTTCTGCAGATATGAGCCATAATGCCTGTGGCCAGTGCGTCACCCATCACATTGACCATGGTCCTGAATCGATCCCTGGGTAATAAAATGATAGAAGTCATCCACAGTGTTAACAAAGgTTTCCTTGTGGCCCTTAGGAAATTCTCCGAGGCCAGTACCGGTGTGCAGACCAGGGGTTGGGGACCTTTGGCTTATAAGATCGGGTCAGCATTTCTACACTAAGTCGCATCCTACAGAAACATAACTTCAGAATGGAGCAGCTGTACAGGGTGCCATTTGAGAGGAACAGTGTCAGGGTCAAGGATCTGCGCCATGATTATGTGCAGACAGTTCTGGATTTTGATGCCGTCGAACTGCCACATGAGTTCATCTACGTGGATGAGGCAGGCTTCAATCTGGCCAAAACCAGGCGTCGGGACTGTAATGTAGTTAGAAAAAGGGCCGTTGTAAATGTCCCTGGGTAGCGTGGGGGAAATATCTCCTTGTGTGCTGCAATTAGTATCCAAGGAGTACTACATCACTCTGCCACTATAGGTCCCTACATTACAGAACAGATCATTGCATTTCTAGATGCACTACATGCAGTTGTGCAGGACAGACCATTGCAGCCCAGGTTTGTTGTCATCTGGGATAATGTTAGTTTCCACCGGGCTGCTCTGGTCCGAGATTGGTTCAACAACCATAACCATTTCACACTTTTATACCTGCCCCCTTACAGCCCCTTTCTAAATGCAAGTATATGACCGCATACCTCTTCTGCAAGCAATGGAAGAGGCATGCGGATATTTTCCCCGATAACCAAGCCCGCGAGGACATTGCCTGTGATGTTGACAAGGTCTTGTGGCCAGATCCGAACAGAAGGCGGGATCCATAagccccccaacccccaccacacacacatgcacacatgcacacacacacacacacacacaaaacaatatcCCAATAGCAATTTATctcttatttctttatttctgtaaacatctttgttttttgtaaaaactCTTGTTTGATTACTGCAGAAATTCTACTCTTGAGTTTTACAGAAGACTGAGTCtgagaaaatgacaataaaaatagaaacacaaagactgcagtgttttatataaagcacATCAGTGGGTTGCTGGTGATATGAAAGTGTAATTATAATGCAGAATTTCATTTTTACAAAGGAGTGTTAAGTTTTCATTGCAGTGTGTCATTTTGGCATAGATGTGAGTTGTTAATCTCCATGTGCTATGTCTGATTGGCTTGTGTGTAGAGACATAATGAGCCAAATTCTGCAAAAAGTGTGTAAGCAATAGACAAAAACAAGGAACACACTGCTATTCAAATATGCACACTGACTCATCAAATGGGCAAACACCTGTCACACAGTTTTACAATTAGCAATCAGAGCTTAAGCATAAAAGGGCAACAGGTGAGCTCTTCtgttttggaattttttttctgcctggaGATGGAAAGTGTATGACCAAAATCCACAAACGCATATATCCCTTCTCCAAGCAATGGAAGACGTGGAGATATAGCAGTTGATGCTTTTCATGGCTGGATTCGCCATGCTAGGCGAAATTTCCCCCACTGCTTGGCCAGGGAAAACATTGCTTGTAATGTGGATGAGGTGCTGTGGCCTGACCGAAACAGATGAGAGGATGcagcatagtttttttttttttttttactgtaactgtatacagtatacagtacactgtgtacattgtttttgtggg
>TU154602
GTCTGCTTAATGTTATTACAGTCGGACATGTCATGAAATCAGAGGCAGGACAGGCCATTTTCCTAGACTTGGGTGGGCTTGTATACCTGTGGATATAGGTTAAGGGTGGTGGCGTTGGTGGGAATAGGACTGTTggtgtttttgtctgtctgtctgtctgtctgtctttctgtatgTCTATCTGTGTCCCCGGGGCTTCCAGACTGATTTAGCAGAAATCAGATCAGACTAAGAAGCTCATATGAGGCATAATCTGTGTGACATTTACATATATGTGTATCAAGTTAATCccataatattttttattaattcagaATTAAACTAAATGTGTGACATTAGATTAATTCACATGTTGCACTCAAAACACTATTCACTATGCACTATTCCTGCACCATTCATAATTGCAAATAGAAATGTATTCAACAACATCAACAGGGTCAGCATTTCTACACTAAGTCGCATCCTACAGAAACATAACTTCAGAATGGAGCAGCTGTACAGGGTGCCATTTGAGAGGAACAGTGTCAGGGTCAAGGATCTGCGCCATGATTATGTGCAGACAGTTCTGGATTTTGATGCCGTCGAACTGCCACATGAGTTCATCTACGTGGATGAGGCAGGCTTCAATCTGGCCAAAACCAGGCGTCGGGACTGTAATGTAGTTAGAAAAAGGGCCGTTGTAAATGTCCCTGGGTAGCGTGGGGGAAATATCTCCTTGTGTGCTGCAATTAGTATCCAAGGAGTACTACATCACTCTGCCACTATAGGTCCCTACATTACAGAACAGATCATTGCATTTCTAGATGCACTACATGCAGTTGTGCAGGACAGACCATTGCAGCCCAGGTTTGTTGTCATCTGGGATAATGTTAGTTTCCACCGGGCTGCTCTGGTCCGAGATTGGTTCAACAACCATAACCATTTCACACTTTTATACCTGCCCCCTTACAGCCCCTTTCTAAATGCAAGTATATGACCGCATACCTCTTCTGCAAGCAATGGAAGAGGCATGCGGATATTTTCCCCGATAACCAAGCCCGCGAGGACATTGCCTGTGATGTTGACAAGGTCTTGTGGCCAGATCCGAACAGAAGGCGGGATCCATAagccccccaacccccaccacacacacatgcacacatgcacacacacacacacacacacaaaacaatatcCCAATAGCAATTTATctcttatttctttatttctgtaaacatctttgttttttgtaaaaactCTTGTTTGATTACTGCAGAAATTCTACTCTTGAGTTTTACAGAAGACTGAGTCtgagaaaatgacaataaaaatagaaacacaaagactgcagtgttttatataaagcacATCAGTGGGTTGCTGGTGATATGAAAGTGTAATTATAATGCAGAATTTCATTTTTACAAAGGAGTGTTAAGTTTTCATTGCAGTGTGTCATTTTGGCATAGATGTGAGTTGTTAATCTCCATGTGCTATGTCTGATTGGCTTGTGTGTAGAGACATAATGAGCCAAATTCTGCAAAAAGTGTGTAAGCAATAGACAAAAACAAGGAACACACTGCTATTCAAATATGCACACTGACTCATCAAATGGGCAAACACCTGTCACACAGTTTTACAATTAGCAATCAGAGCTTAAGCATAAAAGGGCAACAGGTGAGCTCTTCtgttttggaattttttttctgcctggaGATGGAAAGTGTATGACCAAAATCCACAAACGCATATATCCCTTCTCCAAGCAATGGAAGACGTGGAGATATAGCAGTTGATGCTTTTCATGGCTGGATTCGCCATGCTAGGCGAAATTTCCCCCACTGCTTGGCCAGGGAAAACATTGCTTGTAATGTGGATGAGGTGCTGTGGCCTGACCGAAACAGATGAGAGGATGcagcatagtttttttttttttttttactgtaactgtatacagtatacagtacactgtgtacattgtttttgtggg
>XR_005640749.1
TAGGTCATCATCTGCTGGATGCTTATCATTGGCTTAGTTTCACAGATCAGAGGCACCTGGCGGACGCAATGGTCACAAAGGAGAAGAGGAATCGGAatcacattcatttttaatttgcaTAATTGCATATATCTTTCATACAAAAAGCTTATTTCCAAGGTTGGATAGGGACATAATTTGTGGAAAAGTTAATGCATGGATAATAGACTTCTGTCACAGTGGCAGAAGTGATGAAATGGCACAAAGGCATGTAACAGTAATAACTATGAAGATGAAATGTGTCtctctagatagatagatagatagatattaatCCTGTTGTCTTGATCAAATGAAATCAGTTTTTAACCATAACAGATGTTTTGTTTACAGTGAACTCTAATATGATCTAAAATGACTGCTGGTAAGGTAGGACACATATAAGGGGATTTTTGGGGAAAACTTTAGTtaaatgagaagactgatactACTGCCATGCCTGTGTGTCATTCAAGGTTGTAGCATCAACCACTTTTCTGTCTTTCAAACTAAGATGACAATTTATTGACACACAGAAGTCTAGACAACAAATGAATACATTGATTGTTTTTGGCCTTGTAGGCTCTCACCTGCTCCCCTTCTTTGACAAAATCTTTTCTGCAGATATGAGCCATAATGCCTGTGGCCAGTGCGTCACCCATCACATTGACCATGGTCCTGAATCGATCCCTGGGTAATAAAATGATAGAAGTCATCCACAGTGTTAACAAAGgTTTCCTTGTGGCCCTTAGGAAATTCTCCGAGGCCAGTACCGGTGTGCAGACCAGGGGTTGGGGACCTTTGGCTTATAAGATCGGGTCAGCATTTCTACACTAAGTCGCATCCTACAGAAACATAACTTCAGAATGGAGCAGCTGTACAGGGTGCCATTTGAGAGGAACAGTGTCAGGGTCAAGGATCTGCGCCATGATTATGTGCAGACAGTTCTGGATTTTGATGCCGTCGAACTGCCACATGAGTTCATCTACGTGGATGAGGCAGGCTTCAATCTGGCCAAAACCAGGCGTCGGGACTGTAATGTAGTTAGAAAAAGGGCCGTTGTAAATGTCCCTGGGTAGCGTGGGGGAAATATCTCCTTGTGTGCTGCAATTAGTATCCAAGGAGTACTACATCACTCTGCCACTATAGGTCCCTACATTACAGAACAGATCATTGCATTTCTAGATGCACTACATGCAGTTGTGCAGGACAGACCATTGCAGCCCAGGTTTGTTGTCATCTGGGATAATGTTAGTTTCCACCGGGCTGCTCTGGTCCGAGATTGGTTCAACAACCATAACCATTTCACACTTTTATACCTGCCCCCTTACAGCCCCTTTCTAAATGCAAGTATATGACCGCATACCTCTTCTGCAAGCAATGGAAGAGGCATGCGGATATTTTCCCCGATAACCAAGCCCGCGAGGACATTGCCTGTGATGTTGACAAGGTCTTGTGGCCAGATCCGAACAGAAGGCGGGATCCATAagccccccaacccccaccacacacacatgcacacatgcacacac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU154601 True 2309 lncRNA 0.41 4 14613613 14618164
TU154602 False 1969 TUCP 0.42 2 14613613 14615772
XR_005640749.1 False 1550 lncRNA 0.44 4 14614432 14618224

Neighbor

gene id symbol gene type direction distance location
LOC120567803 LOC104934906,LOC103364073,LOC103479012 coding downstream 48908 14561507 ~ 14564705 (-)
LOC120567737 NA coding downstream 59944 14551037 ~ 14553669 (-)
LOC120568348 lrp8 coding downstream 76148 14461472 ~ 14537465 (-)
LOC120568914 LOC104950559 coding downstream 177407 14430089 ~ 14436206 (-)
LOC120567626 LOC103364420,LOC104948953 coding downstream 184055 14422482 ~ 14429558 (-)
scp2a scp2 coding upstream 7943 14626167 ~ 14651376 (-)
czib LOC103363808,LOC100704007 coding upstream 35184 14653408 ~ 14658272 (-)
uck2b LOC104935075,LOC103363741,LOC102787436,LOC100703739,LOC101481213 coding upstream 40648 14658872 ~ 14667205 (-)
zte38 LOC104949683 coding upstream 56193 14674417 ~ 14677944 (-)
prdx1 prdx1,LOC103140020 coding upstream 61183 14679407 ~ 14683559 (-)
G114544 NA non-coding downstream 95720 14517476 ~ 14517893 (-)
G114530 NA non-coding downstream 147365 14418851 ~ 14466248 (-)
G114538 LOC104949927,LOC103364340 non-coding downstream 165680 14440881 ~ 14447933 (-)
G114518 NA non-coding downstream 292850 14319343 ~ 14320763 (-)
LOC120568036 NA non-coding downstream 442139 14124703 ~ 14171474 (-)
G114633 NA non-coding upstream 71233 14689457 ~ 14690066 (-)
G114636 NA non-coding upstream 75408 14693632 ~ 14693957 (-)
G114661 NA non-coding upstream 133021 14751245 ~ 14751528 (-)
LOC120569096 NA non-coding upstream 162052 14780276 ~ 14782472 (-)
LOC120568695 NA non-coding upstream 336354 14954578 ~ 14958403 (-)
tfr1a NA other downstream 644802 13949871 ~ 13968811 (-)
dis3l2 dis3l2 other downstream 1131388 13469531 ~ 13482225 (-)
G114152 NA other downstream 1525050 13084561 ~ 13088563 (-)
LOC120568578 wdr48 other downstream 1638285 12966466 ~ 12975328 (-)
LOC120568934 LOC104956577 other downstream 1844988 12760748 ~ 12768625 (-)
G114680 NA other upstream 177694 14795918 ~ 14797044 (-)
mfsd8l2 LOC102304717,LOC102799006,LOC108238243,LOC103479065 other upstream 671858 15290082 ~ 15304610 (-)
G115164 btf3l4 other upstream 1525936 16144160 ~ 16148121 (-)
cc2d1b cc2d1b other upstream 1564430 16182654 ~ 16201698 (-)
mppe1 mppe1,LOC102781954 other upstream 1699194 16317418 ~ 16327426 (-)

Expression


Co-expression Network