G115042


Basic Information

Item Value
gene id G115042
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 15735480 ~ 15735895 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU155170
gtttccaacttcgccaactttccaggtgtgtctgtaaaacacggacagagacaacttctctcttttgatgctttacaagcaacgtgaaacctagctaacaggtgaagaacacaaacaactaaatcactagctaacctactttaactgtgcaggaactagaccaatacaacaacaggcttacatgaactgacaacataagttatactacttacagttctcaaggacgcacacacaccatctcaactgattatcctccggacagcagtctctctttcttttctctcacttttttctgtgtggcgcacgcgcccgctcgcggtgtgaggcgcgtgtccgcgctattctccgacattacgacctcttgtacaaaactaaagtaacgagccaatttttaaaatgtaaggagtagaaagtac

Function

NR:

description
PREDICTED: uncharacterized protein LOC106607957

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU155170 True 416 lncRNA 0.44 1 15735480 15735895

Neighbor

gene id symbol gene type direction distance location
cldn1 cldn1 coding downstream 114821 15616397 ~ 15620659 (-)
bcl6ab NA coding downstream 147596 15580776 ~ 15587884 (-)
fam78ba LOC108248539,LOC106530399,LOC103357776,LOC101481240,LOC104920913,LOC105925252,LOC103479089 coding downstream 162340 15568830 ~ 15573140 (-)
imp3 imp3 coding downstream 181511 15549860 ~ 15553969 (-)
zgc:55943 clg18h1orf21,LOC104920916,LOC103358173,LOC102298056 coding downstream 188123 15537896 ~ 15547357 (-)
pigk pigk coding upstream 187807 15923702 ~ 15954239 (-)
zzz3 zzz3 coding upstream 297387 16033282 ~ 16054068 (-)
usp33 usp33 coding upstream 318364 16054259 ~ 16077214 (-)
fubp1 fubp1 coding upstream 358113 16094008 ~ 16103715 (-)
slc25a24l LOC105932242,LOC107095427,LOC104957513,LOC102785394,LOC101478509 coding upstream 368877 16104772 ~ 16111436 (-)
G115041 NA non-coding downstream 199 15735054 ~ 15735281 (-)
G115017 rps8 non-coding downstream 8251 15721019 ~ 15727229 (-)
G114883 NA non-coding downstream 327853 15407377 ~ 15407627 (-)
LOC120568803 NA non-coding downstream 342221 15387478 ~ 15393259 (-)
G114836 NA non-coding downstream 469256 15264520 ~ 15266224 (-)
G115043 NA non-coding upstream 634 15736529 ~ 15736827 (-)
G115048 NA non-coding upstream 5929 15741824 ~ 15745228 (-)
G115054 NA non-coding upstream 106855 15842750 ~ 15843093 (-)
G115056 NA non-coding upstream 107264 15843159 ~ 15846609 (-)
G115060 st6galnac5,LOC102788813 non-coding upstream 182426 15918321 ~ 15921531 (-)
mfsd8l2 LOC102304717,LOC102799006,LOC108238243,LOC103479065 other downstream 430870 15290082 ~ 15304610 (-)
G114680 NA other downstream 938436 14795918 ~ 14797044 (-)
LOC120568687 NA other downstream 1117256 14613613 ~ 14618224 (-)
tfr1a NA other downstream 1766669 13949871 ~ 13968811 (-)
dis3l2 dis3l2 other downstream 2253255 13469531 ~ 13482225 (-)
G115164 btf3l4 other upstream 408265 16144160 ~ 16148121 (-)
cc2d1b cc2d1b other upstream 446759 16182654 ~ 16201698 (-)
mppe1 mppe1,LOC102781954 other upstream 581523 16317418 ~ 16327426 (-)
LOC120568735 LOC103355759,LOC101465864,LOC100696456,LOC102781658,LOC102293165 other upstream 595057 16330952 ~ 16335956 (-)
G115312 ralbp1,LOC102778314 other upstream 901213 16637108 ~ 16639812 (-)

Expression


Co-expression Network