G115176


Basic Information

Item Value
gene id G115176
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 16178079 ~ 16182446 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU155343
aGGGTTTTTGGCTTTTCAAACAattgactgtttatttaaaataaaaaaaacttatttaaacaaaaccaaGTCAATGTCAGAACTgaatgatttttgttttaagtttcaTCCATAAACTAGAAGATAACTGTTAAAATGCAAAGTTGATTTGCTCTCTTCACCGTTTCAAGCTTGTTTGCATGCAGTGTATTAAGTTTGGATAGTAACATCTTACAACTGAATACAAAAAAATTGCTACTTTTTAAGTCAAACAAATTGCACCTTTTTCTTTTGGATTTAGGACATATTGCACACGTCAGATAACGCCCAAATCAAACGTAACAGAAAACAggtccaaaaaataaaaaataaatcctcatGTCTCCTCTTCATTAATGctaatttataaaaacagaACTGCCGGCGGCGGTGGCGGCGGCTGCTGCTCAACGTCACATAGTGAAGACACAGTGATTGAGATACACCAACTCTGGTTGGATCACAGTAATAAACCCAGAActggtgacctttgacctctcatTCAGTCTTTACTGAACATTTAATCGGCTTCACTAACATTACTTTGCTACAGTAGCTTCTAAAATACTTCAAATTGCGTAATGAACGAATACAGGACAGCTACGGGTCTAATTTAAACTCGCCGAAGCGTCGGCTCGTCTGCAGATTTTCACGTGATTGTCTGATTCTCACTTGTGATGACGAGATCGTTTATCTCCGGCAAAATGCTTTTAACAAAACCTCTCGTACTGTATTAACAGTACTTTTTTTTGTGTAGCCCCTTCTGGTTTTTATATTAGCATGATAAAAGATGGAGAAGTTGCCATAATGCAGAATGATTACTGTACAGAGCATTTGGACATGACAGGGTGGTTTTTGGTGATTAGTCTAGccagaaacaaaacacacattttgcagATTTGAACAGAAACAGGAGGAATACATTCTTATATTTTTTCCCAGGTCCATGTTACTAAAAGGAGAGCACAATCCAGAGCAGAAAGAGATGAGCTGCAGCAGCGATCTGTTTATAGATGCACAAACAGTTGAGGCCTTCTGAAGACGACAGATCAGCGATCTGCAGGGTTCCTACGcaggactaaaaaaaaaaaaaatgttttttaaaagtctggAGCAGGATGTTCATGATTTCGGGGCTGtgggaggataatcagttgcagaaaatgttaaatgaaaTACATTCAGCTTCAGGTCAAGCAAACTCCTGTTTCTGCAGGAACCCCAGATCTTTACAAACGCTGAACTTTTCTGACattgggagagaaaaaaacaaaacaaaaaaaatgtctttgagGACACAGCGGCAACCCAGACGCTCGCTTTCACTCTCCTATTAATGGCTTAGAATCCAGTGCACTGCTTCTGCAATTTAATAaagatatattatatatctttaCGTCTTCAACAGTTATTCTCTTTTAAATAACTTGAGTGGCTTTTTCCAACCAACCACTGCAGGACGAACAACAAGTGCTGATTATGTAGAAGCTTGAGTTGATGAATGAGATTTAAAAACTGATTTCCCCTCTTCAGCTTTATGTACAGATTGAGTTTATCAATAAAGCAttggaaccttttttttttttttttttttttaaatcagctgTCTACTGTAGGACAAAAAGGGCTTTATGTAATCTTATTTCACAGAGCGTCAGTCAGAGGAGTCCATGACGGTAACGTCAGTAATACTGTCTTCCACTGGGATCTCTGGAGGCTACAGATGCACAGTTAGAATGGAGAGGTTGTTACGCCTACAAAACAATATGTACAACAGGTTAACGGATTTATCCATGAAGTCAAGCATCTGGTGATTGATGAGTAAAGCTTAAAGAGGTGAAACTaaatgggtttttttttctttgtttttttcacttgaTGAATTGCTGTAGGCACTGAGCACCatggtgcaaaaaaaaataaaaaaaaaataaaatcaccacacagacacaacctCCAACTCCTCATCTAATGATTTGTAGACGTAACGTTCAGAGGAATAGTCTGGACTTGTCAGCGATGGATAGGAGTCTCCCTTGTTTTAGAGCGTCCGTGCTACACAGCCCAGAGTGCTCCAGGACCCCCGGGTGCCACAGGGACATTGGAGTGACGGGTGAGCTACGTACAATACCTATGGAAAGTATTTACCATCCCTGAaagtttgattgtttttttccaaaaaatggAATCAAACTATTACGAGGGTAATTTAGTTCAGCGTGTTGTAAGAGcgtaacaataaaaaaaaaaaaaaaaaaaaattcataatagATACATACTGCTGTATATATTACGGGCTCACGGTGGTGTGTAATGATTTAGGTGTTCCCTATTAAAGGGGGTAAATACTTGTttaaacatgtattttgtgttttatatttataattaattCATTAGGACTTTGTAGAGATCAGTAGAGAGGGTCTTCAATCAAATCTACTTTGAATTAATGTTGGGGGTAAAACACTTTTTATAGGCACTGTAACACTACACTGGGGTCAGACAGTATGATCTCTGGTGTTCATTTCCTGCTCGGAGCACCTCGGATGACCACCAGAGATCAGGAGTAGCGGTCGGGTGAGCTTCAGGTACGCAGCACACGGCCCGATGATCCTGCTCGGAGCTTCCTCAGGCCCCGGCCGCCTCTGGATGCATAGGTTTGACTTGAGGAGTGCTACCCCGCCTGGCACGCCACAGTTCTCGGGCTCTTTTGAAGTGCAAACGGTCGAAGGGAGACGATGGAGGACCCGGCCCGTGAGATGGCGTCAGAAAAGTAAAAAGATGTTTTCGAGGTGAAGCGCCGAAGACTCCTAGGAGATGATCTCCAGGATGTAGAAGACCAGCTCCATGACCACCGGGCCCTCGCTCAGCTGACACGCCCCGCCGTGGATGACGGGGATCAGAGCGCTGTCCAGGTCGCTCAGGTACTGAGGCAGGAGAGGCTGGCCGTTACTTCCCGCCAGGTAACCCACCTGTAACGATGAGGACAGGTTAGACTGGATCCTCACTGCGGTCAGCGTACAGGGAAACATCTAGATTCAGTAGATTTGGTCTCTTAAATCTTTCAGACAGCAGTGTACCTgcataaaaaactaaaatagttCATTTACAGATCGctgaaacaaacacattatTGTCCCCCGTCTCTCCATTTTTCTTTGCTTTCACCTGCAAACACGGTTTGTTTTAAGTGCTATAGATCAAGTTTGTGTGCTTGCAATAATGCCTCCGTTTCATCTGAACCGCCCCCACCTGGTCCGAGTCCAGGGTAACCCTTAGTCCCAGTTTGGCCATGCCGTCCTCCTTCAGCAGCTTCAGGTGCGGACAGAGCGCCATGCAGAAAGCTCTCGCCACGTTCTCCGTCAGCCGGCTGTGGTCGGCCGGGTCGCTCAGACCGTTGGGTTGATCTTCACTCTGGAGGAAAAACCTCTGTCCAGCGGATGACTTTGCCGTTGGCTTTAAACTCCGAGCCATGAAAGATCTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU155343 True 3502 lncRNA 0.42 2 16178079 16182446

Neighbor

gene id symbol gene type direction distance location
txndc12 txndc12 coding downstream 34393 16137864 ~ 16143686 (-)
slc25a24l LOC105932242,LOC107095427,LOC104957513,LOC102785394,LOC101478509 coding downstream 66643 16104772 ~ 16111436 (-)
fubp1 fubp1 coding downstream 74364 16094008 ~ 16103715 (-)
usp33 usp33 coding downstream 100865 16054259 ~ 16077214 (-)
zzz3 zzz3 coding downstream 124011 16033282 ~ 16054068 (-)
LOC120567616 LOC103355753,LOC107095425,LOC101067060,LOC108232884 coding upstream 19631 16202077 ~ 16208977 (-)
LOC120568161 LOC104950912 coding upstream 45492 16227938 ~ 16242697 (-)
napgb napg,LOC102781071 coding upstream 247696 16430142 ~ 16436241 (-)
acss2l LOC100697261 coding upstream 358684 16541130 ~ 16562163 (-)
LOC120568912 apcdd1,LOC102777074 coding upstream 503034 16685480 ~ 16712264 (-)
G115180 NA non-coding downstream 869 16175965 ~ 16177210 (-)
G115179 NA non-coding downstream 2373 16175358 ~ 16175706 (-)
G115178 NA non-coding downstream 3526 16174261 ~ 16174553 (-)
G115175 zfyve9 non-coding downstream 6268 16171473 ~ 16171811 (-)
G115075 NA non-coding downstream 145852 16031932 ~ 16032227 (-)
G115191 NA non-coding upstream 37448 16219894 ~ 16220110 (-)
G115192 NA non-coding upstream 39342 16221788 ~ 16222434 (-)
G115200 NA non-coding upstream 61346 16243792 ~ 16245893 (-)
G115240 NA non-coding upstream 134205 16316651 ~ 16316972 (-)
G115278 mtcl1 non-coding upstream 326131 16508577 ~ 16512895 (-)
G115164 btf3l4 other downstream 29958 16144160 ~ 16148121 (-)
mfsd8l2 LOC102304717,LOC102799006,LOC108238243,LOC103479065 other downstream 873469 15290082 ~ 15304610 (-)
G114680 NA other downstream 1381035 14795918 ~ 14797044 (-)
LOC120568687 NA other downstream 1559855 14613613 ~ 14618224 (-)
tfr1a NA other downstream 2209268 13949871 ~ 13968811 (-)
cc2d1b cc2d1b other upstream 208 16182654 ~ 16201698 (-)
mppe1 mppe1,LOC102781954 other upstream 134972 16317418 ~ 16327426 (-)
LOC120568735 LOC103355759,LOC101465864,LOC100696456,LOC102781658,LOC102293165 other upstream 148506 16330952 ~ 16335956 (-)
G115312 ralbp1,LOC102778314 other upstream 454662 16637108 ~ 16639812 (-)
epb41l3b epb41l3,LOC102298622,LOC106534525 other upstream 573885 16756331 ~ 16811918 (-)

Expression


Co-expression Network