G115178


Basic Information

Item Value
gene id G115178
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 16174261 ~ 16174553 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU155347
CACCCGTCCCCTGCATCCCTTCGATATTTGCAGCATATGTGTACATTTTCTATCCATCTATCATTTGTTGTACATATTGCATTTGGATATTGGTTATGTTGTATATGCTATTGTGATATAAGCTATTCAAGCACTGTTCTGAAAGggcaacaaaacatttcactgCACATTGTGAAGATATGCTGactatgtgacaaataaactaaaacttCTTTAGGATAGTATAAATGTGGTTTCTAAATAACAATTAAATCCATTTTCTGAACATGAATGGTCAAGTAAGCAATTGGAAT

Function

GO: NA

KEGG:

id description
ko00140 Steroid hormone biosynthesis
ko04913 Ovarian steroidogenesis

RNA

RNA id representative length rna type GC content exon number start site end site
TU155347 True 293 lncRNA 0.33 1 16174261 16174553

Neighbor

gene id symbol gene type direction distance location
txndc12 txndc12 coding downstream 30575 16137864 ~ 16143686 (-)
slc25a24l LOC105932242,LOC107095427,LOC104957513,LOC102785394,LOC101478509 coding downstream 62825 16104772 ~ 16111436 (-)
fubp1 fubp1 coding downstream 70546 16094008 ~ 16103715 (-)
usp33 usp33 coding downstream 97047 16054259 ~ 16077214 (-)
zzz3 zzz3 coding downstream 120193 16033282 ~ 16054068 (-)
LOC120567616 LOC103355753,LOC107095425,LOC101067060,LOC108232884 coding upstream 27524 16202077 ~ 16208977 (-)
LOC120568161 LOC104950912 coding upstream 53385 16227938 ~ 16242697 (-)
napgb napg,LOC102781071 coding upstream 255589 16430142 ~ 16436241 (-)
acss2l LOC100697261 coding upstream 366577 16541130 ~ 16562163 (-)
LOC120568912 apcdd1,LOC102777074 coding upstream 510927 16685480 ~ 16712264 (-)
G115175 zfyve9 non-coding downstream 2450 16171473 ~ 16171811 (-)
G115075 NA non-coding downstream 142034 16031932 ~ 16032227 (-)
G115061 NA non-coding downstream 251805 15922204 ~ 15922456 (-)
G115060 st6galnac5,LOC102788813 non-coding downstream 252730 15918321 ~ 15921531 (-)
G115056 NA non-coding downstream 327652 15843159 ~ 15846609 (-)
G115179 NA non-coding upstream 805 16175358 ~ 16175706 (-)
G115180 NA non-coding upstream 1412 16175965 ~ 16177210 (-)
G115176 NA non-coding upstream 3526 16178079 ~ 16182446 (-)
G115191 NA non-coding upstream 45341 16219894 ~ 16220110 (-)
G115192 NA non-coding upstream 47235 16221788 ~ 16222434 (-)
G115164 btf3l4 other downstream 26140 16144160 ~ 16148121 (-)
mfsd8l2 LOC102304717,LOC102799006,LOC108238243,LOC103479065 other downstream 869651 15290082 ~ 15304610 (-)
G114680 NA other downstream 1377217 14795918 ~ 14797044 (-)
LOC120568687 NA other downstream 1556037 14613613 ~ 14618224 (-)
tfr1a NA other downstream 2205450 13949871 ~ 13968811 (-)
cc2d1b cc2d1b other upstream 8101 16182654 ~ 16201698 (-)
mppe1 mppe1,LOC102781954 other upstream 142865 16317418 ~ 16327426 (-)
LOC120568735 LOC103355759,LOC101465864,LOC100696456,LOC102781658,LOC102293165 other upstream 156399 16330952 ~ 16335956 (-)
G115312 ralbp1,LOC102778314 other upstream 462555 16637108 ~ 16639812 (-)
epb41l3b epb41l3,LOC102298622,LOC106534525 other upstream 581778 16756331 ~ 16811918 (-)

Expression


Co-expression Network