G115223


Basic Information

Item Value
gene id G115223
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 16430161 ~ 16431655 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU155419
tttcaccaATGGCAAAGTTTATGTACGTACACTCAAGTCCAGTCTTGATCTTGCTAATGCACGGAAGCATCACAGATAATGAGAGGGCATCACAAAAGTAGCATGAATGTGTATGCATTAAATATCGCTTAACAGGAAGAGCATTAGCCTCATTAAAGCTAAATAGGTCTTGGGAGGCTACACAGTCATTACATGTCTGTCAGAGGCCATTTTGGGCCAGACATCTGCAGCCGCTGTTCACTAAGATGGAAAATCTGTCCACTAACTCATTTAAGAAAATGCACAGAAACCATAAAATGCCACACAATGGAAATGTTTACTGATGCATGTGCAACGTTTTGAGATATGCTCTTGAGGAAAATACAAGAAGTGGGCAACagcacaaataaaaaatgttaacaaTCCCTTTATCACCTTTAGTTATGTGGTATCCAAATAATTTTAATTAGCATGTAAATGATATTGTCCCTAATAGTGCTTCTCGCATTTACGGTATGAGCGATGAGCTAAATCATAAATGCACTAATTCAGCTTTAAAGAGGAAATTAATAGGGGGAATTGGAAATAAAGACACAGCCATGACTATTTGTTTAGTTTAaggtgacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacactctcttcaATTGGCTACAAGCTGCGCCATCATGAATTGTACTTTTTCTTGATAACTTGAATAAGCGCTTTGATTTACCATTGCATTATTCCAAACATGCATTTACACACTGATTGCATATTGTTCCGGTAACATTTTCAAAAGGCTGCAGCCATGAATACTGAATAATTTAACTCTGTACAAATAAACACCTATACACTGACAAACTCAAACATATTTAGAGTATTTCTGATTATACCTATAGCACTCTTAGGACTCAACGACAAGAGCAAAATGTACAGCTTCACGAGACAAGAAGTAATTGAACATTTACATACAACAGGCTTCCATTCATTATTGAACATCGAAGATTTTTCATTACACTGAGGATCCACCTCAAggaaacacaaattaaaaaggCTGCTTAAACTTGGGTCGACTCCTCTGCAACCCCAACTGTTGGTTTTTTTAAGtagcttttttcttctttcttgcaCACTAAACAGCCACACATCTGGGCTTCAGAGCTCAAAGAATTTGTCAAGGTTTTTAACTTGTACACAGAGGGTGTGGTGGTGGAGCAGCAGATGGGTAGTGTTGGCACTCTGGAGGCTCCAGGCTAACACAGCCCTCCCTCATAATCATCCTCATCCTCGGCGGCAGCTGGCGCCCCACTAGCACCGCCTtgtggagcagcagcagccttcttcttctttcctcctcctccaggtaCCCTCAGGGAAATGGCCAGCTTGGCGTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU155419 True 1403 lncRNA 0.41 2 16430161 16431655

Neighbor

gene id symbol gene type direction distance location
LOC120568416 piezo2 coding upstream 765 16344648 ~ 16429396 (+)
LOC120568300 gnal,LOC106520735 coding upstream 116360 16252963 ~ 16313801 (+)
pak1ip1 pak1ip1 coding upstream 204069 16222043 ~ 16226092 (+)
zfyve9a NA coding upstream 249307 16151205 ~ 16180854 (+)
LOC120569020 btf3l4,LOC100695932 coding upstream 281391 16144107 ~ 16148770 (+)
rab12 rab12 coding downstream 5926 16437581 ~ 16446542 (+)
ndufv2 ndufv2 coding downstream 122090 16553745 ~ 16560428 (+)
ankrd12 ankrd12,LOC102778611 coding downstream 130541 16562196 ~ 16609463 (+)
twsg1a twsg1 coding downstream 181919 16613574 ~ 16628872 (+)
ralbp1 ralbp1,LOC102778314 coding downstream 198025 16629680 ~ 16639812 (+)
G115208 NA non-coding upstream 51642 16289237 ~ 16378519 (+)
G115207 NA non-coding upstream 161332 16262657 ~ 16268829 (+)
G115136 NA non-coding upstream 180514 16242987 ~ 16249647 (+)
G115128 NA non-coding upstream 197685 16231698 ~ 16232476 (+)
G115124 NA non-coding upstream 210718 16219182 ~ 16219443 (+)
G115295 NA non-coding downstream 175048 16606703 ~ 16608542 (+)
G115350 LOC104967252 non-coding downstream 328780 16760435 ~ 16821676 (+)
G115404 NA non-coding downstream 725973 17157628 ~ 17158200 (+)
G115437 LOC101466820,LOC102797643,LOC103353954,LOC100700019 non-coding downstream 736918 17168573 ~ 17169818 (+)
G115442 LOC103353955 non-coding downstream 751497 17183152 ~ 17186653 (+)
LOC120568164 LOC104950913,LOC104937610,LOC103355754 other upstream 201610 16226307 ~ 16228551 (+)
st6galnac5a st6galnac5,LOC103370426,LOC102788813 other upstream 508630 15865586 ~ 15921531 (+)
st6galnac3 st6galnac3 other upstream 587067 15764683 ~ 15843094 (+)
slc35a3b LOC103357859,LOC104957008,LOC101481522,LOC102792347 other upstream 861667 15554471 ~ 15568494 (+)
zgc:153115 klf13,LOC104948390,LOC103358333,LOC101073550,LOC105030379,LOC106568757,LOC107752329 other upstream 901392 15520782 ~ 15528769 (+)
LOC120568419 LOC102779359 other downstream 7370 16439025 ~ 16527682 (+)
LOC120568363 ankrd12,LOC103396444,LOC102778611 other downstream 178721 16610376 ~ 16612206 (+)
LOC120568596 LOC103479750,LOC106948690,LOC102229933,LOC103146349,LOC108232807,LOC105930991,LOC100691642,LOC103353958,LOC107383564 other downstream 974842 17406497 ~ 17483553 (+)
LOC120567767 NA other downstream 1595625 18027280 ~ 18029895 (+)
G115729 NA other downstream 1873494 18305149 ~ 18354344 (+)

Expression


Co-expression Network