LOC120568735 (LOC103355759,LOC101465864,LOC100696456,LOC102781658,LOC102293165)


Basic Information

Item Value
gene id LOC120568735
gene name LOC103355759,LOC101465864,LOC100696456,LOC102781658,LOC102293165
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 16330952 ~ 16335956 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU155443
GAGGGGATCCAACATGGCGTCTTCAATAACTGTACCGCTACTGTTTTGTTTAGcatcattttcttttcaaatcaGCTCCTCCAGACTTTTATCTGAGCCTTGTTACAAACCAATCAAAGACGGCAGACCAGACTCTGTCAAGACACAGGCCCGCCCACATGAGTATGTGAAGgtgtcagaccttcctctgtCCTGGGACTGGAGGAACATCAAGGGGAAGAATTATGTGAGCGTCACCCGGAACCAGCACATCCCCCAGTACTGTGGGTCCTGCTGGGCCATGGGAGCTACCAGTGCACTTGCTGGTAACAAGATGAGAATATAGGGATGGATAGAAGATGTGAACAGGGGTCAGCAACCTTAAGCACAGGAGCAAGGCctgttatttacgACCGTATCAACATCAAGCGTGGAGGAGTGTGGCCGTCGGCTTATCTGTCAGTCCAAAACGTGATAGACTGTGGGAGAGCGGGCTCTTGTTACGGAGGAGATCACCTGAGAGTCTACGCCTATGCACACGAGAGAGGCATTCCTGATGAAACCTGCAACAACTACCAAGCCAAAAACCAAATTGGGGGAAGGCCTCTTTCCTGCTTCCTGTTTCAACATGATATACCGCCATGCATAAAGCCAGGTCCATAAAGTAATGGTTTTCACAGTCAGAGCCTTGACCTTAACCCCATCCAACACCTTGAGGATGAACTGGAACGCGGACTGTGAGCCAGGCCTTATCACCAGACATCAGCACTGGACCTCACCAGTGCTCTTGCGGCTAAATGGAAGCAAATCCCTGCAGCAGGATTCCAAAATCTTCCCAGAAGAGTGGAGACTGTTATAGCAGCATATCACACATCACATATGGGTGTATTGGCTTGGTGTCGTTATTTTGGTCCTATAGTGTATATTCGTTTTAGTGGAAAAACTAATTTAGGATTACATCTAGCGTAGTGttgttacagtatattgtaaaCTGACGACTTAAGGTCACctgtaatgttttttatttatcttgtcatttttaaagacagataatGACAGTTTTTTTGTAACAATAttacagcatttaaatgttatttcacATTACACCTTAACACTACACTggaaattttaaaatgtaacctCACGGTAATTGTACGGATCTGAATAGTAAAATGAGTGTTGTACTGCCCTGTAAATCATAAATGATCTAATTTGTTTCAGAGTGTGAGCAGTTTAACCAGTGTGGCACCTGCTCCTTTTTTGAATCGTGTGCTGTCGTGAAGAACTACACTATGTGGAAAGTGGGCGACTATGGAGAAGTTTCAGGAAGAGACGAGATAAAAGCAGAATTGTACACCAATGGGCCCATCAGGTAGATTGTGCCCTGATGGCCACTGACGGCCTGGAGGGATACTCTGGAGGGATCTTCTCAGAGTTTCACCCCCTGTCTTTGCCGAATCACATTGTCTCTGTGGCTGGCTGGGGTGTGGCGGAGGACGGGACTGAGTACTGGATTGTCAGGAACTCCTGGGGAGAGTTTTGgggagAACACGGCTGGGCAAGAATAGTCACCAGTGCCTATAAAGGAGGAAAAGGCAATTGGTTCAACCTGGGTATTGAGAAAAACTGTGCATATGGAGACCCTGTTGTAACATAGCAGCCTAATTAAACTGATAGAAAGACTCT
>XM_039816418.1
CCTGCGTGTCTGCGTCACACGAAGGAGGGGATCCAACATGGCGTCTTCAATAACTGTACCGCTACTGTTTTGTTTAGcatcattttcttttcaaatcaGCTCCTCCAGACTTTTATCTGAGCCTTGTTACAAACCAATCAAAGACGGCAGACCAGACTCTGTCAAGACACAGGCCCGCCCACATGAGTATGTGAAGgtgtcagaccttcctctgtCCTGGGACTGGAGGAACATCAAGGGGAAGAATTATGTGAGCGTCACCCGGAACCAGCACATCCCCCAGTACTGTGGGTCCTGCTGGGCCATGGGAGCTACCAGTGCACTTGCTGACCGTATCAACATCAAGCGTGGAGGAGTGTGGCCGTCGGCTTATCTGTCAGTCCAAAACGTGATAGACTGTGGGAGAGCGGGCTCTTGTTACGGAGGAGATCACCTGAGAGTCTACGCCTATGCACACGAGAGAGGCATTCCTGATGAAACCTGCAACAACTACCAAGCCAAAAACCAAAAGTGTGAGCAGTTTAACCAGTGTGGCACCTGCTCCTTTTTTGAATCGTGTGCTGTCGTGAAGAACTACACTATGTGGAAAGTGGGCGACTATGGAGAAGTTTCAGGAAGAGACGAGATAAAAGCAGAATTGTACACCAATGGGCCCATCAGTTGTGCCCTGATGGCCACTGACGGCCTGGAGGGATACTCTGGAGGGATCTTCTCAGAGTTTCACCCCCTGTCTTTGCCGAATCACATTGTCTCTGTGGCTGGCTGGGGTGTGGCGGAGGACGGGACTGAGTACTGGATTGTCAGGAACTCCTGGGGAGAGTTTTGgggagAACACGGCTGGGCAAGAATAGTCACCAGTGCCTATAAAGGAGGAAAAGGCAATTGGTTCAACCTGGGTATTGAGAAAAACTGTGCATATGGAGACCCTGTTGTAACATAGCAGCCTAATTAAACTGATAGAAAGACTCTA

Function

NR:

description
cathepsin Z

GO:

id name namespace
GO:0006508 proteolysis biological_process
GO:0008234 cysteine-type peptidase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU155443 True 1665 TUCP 0.46 6 16330953 16335932
XM_039816418.1 False 970 mRNA 0.50 6 16330952 16335956

Neighbor

gene id symbol gene type direction distance location
LOC120568161 LOC104950912 coding downstream 88255 16227938 ~ 16242697 (-)
LOC120567616 LOC103355753,LOC107095425,LOC101067060,LOC108232884 coding downstream 121975 16202077 ~ 16208977 (-)
txndc12 txndc12 coding downstream 187266 16137864 ~ 16143686 (-)
slc25a24l LOC105932242,LOC107095427,LOC104957513,LOC102785394,LOC101478509 coding downstream 219516 16104772 ~ 16111436 (-)
fubp1 fubp1 coding downstream 227237 16094008 ~ 16103715 (-)
napgb napg,LOC102781071 coding upstream 94186 16430142 ~ 16436241 (-)
acss2l LOC100697261 coding upstream 205174 16541130 ~ 16562163 (-)
LOC120568912 apcdd1,LOC102777074 coding upstream 349524 16685480 ~ 16712264 (-)
LOC120568957 LOC103353943 coding upstream 416037 16751993 ~ 16754766 (-)
LOC120567917 tmem200c,LOC104967041 coding upstream 478736 16814692 ~ 16820034 (-)
G115240 NA non-coding downstream 13980 16316651 ~ 16316972 (-)
G115200 NA non-coding downstream 85059 16243792 ~ 16245893 (-)
G115192 NA non-coding downstream 108518 16221788 ~ 16222434 (-)
G115191 NA non-coding downstream 110842 16219894 ~ 16220110 (-)
G115176 NA non-coding downstream 148506 16178079 ~ 16182446 (-)
G115278 mtcl1 non-coding upstream 172621 16508577 ~ 16512895 (-)
G115309 NA non-coding upstream 207657 16543613 ~ 16560473 (-)
G115323 NA non-coding upstream 277072 16613028 ~ 16614925 (-)
G115331 NA non-coding upstream 414944 16750900 ~ 16751275 (-)
LOC120569046 NA non-coding upstream 487346 16823302 ~ 16824660 (-)
mppe1 mppe1,LOC102781954 other downstream 3526 16317418 ~ 16327426 (-)
cc2d1b cc2d1b other downstream 129254 16182654 ~ 16201698 (-)
G115164 btf3l4 other downstream 182831 16144160 ~ 16148121 (-)
mfsd8l2 LOC102304717,LOC102799006,LOC108238243,LOC103479065 other downstream 1026342 15290082 ~ 15304610 (-)
G114680 NA other downstream 1533908 14795918 ~ 14797044 (-)
G115312 ralbp1,LOC102778314 other upstream 301152 16637108 ~ 16639812 (-)
epb41l3b epb41l3,LOC102298622,LOC106534525 other upstream 420375 16756331 ~ 16811918 (-)
ly97.3 NA other upstream 703844 17039800 ~ 17108904 (-)
G115406 crygn,LOC100699485,LOC103353965,LOC103146339,LOC103479740 other upstream 707170 17043126 ~ 17045062 (-)
LOC120568693 rab8a,LOC103479775,LOC101170877,LOC108232971,LOC106516875,LOC107687930,LOC102219409,LOC104931433,LOC104950312,LOC105022474 other upstream 1717028 18052984 ~ 18058159 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
rainbow trout (Oncorhynchus mykiss) G448300 NA non-coding NC_048569.1 CM023223.2 83774597 ~ 83774865 (+)