G115312 (ralbp1,LOC102778314)


Basic Information

Item Value
gene id G115312
gene name ralbp1,LOC102778314
gene type unknown
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 16637108 ~ 16639812 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU155525
TAAGTTACTCAGATCAACACTTTATTCTTCACAGCATTATTCTGTCTGCAACAATAAGCTACAAAAGCTTGGAACAATATGAAAATAACCTCATGAGAAGCTTCTGAGCCCAATCTAGCACTTATCTGTTTCAGTCACAGGATTAATAACATGTTGAATCATGAGTCCAGATGAGATTGCTTTGATTTGCCCGTGACCAAAGCTGGGGCAGTTACACTAGCATACTCCATACAGGtcattattaatatttaaaaaaaataacgtgacaaaACATAGGAGctgaaaatacagtatgtttgcaATTTTACATTGATATACACAAATGGTAAGTAAGTCAGGCCATGCCTTTGCTTTAAATATCACTGAGCGATGACAGTACTTTGCAATAGTCATGGATCAGTGatgaaattaaatgattgaCTTGTAatctttaagttttttttttttttttttttacttactttcAACTGATGCCATGAAATATAACTCCACACATCAAGAGTTAAAAAACACGatcaaatacacaacaaaactaaataagCCTCCTGCGTGTCTCGGCACACATTTTGGCGACAATAATCATCGCTACAGATTTGTTGTTCCATCATAAAACTGcagaaatgtaattttccaCGTTTACTTGTTCGTgcaagagaagcagagagaagaTGATTGCACTACAGAGCAAAGTGTGACTGTAACAATGTGGCCTCCAGCTGTTTGTCTATCTATATTATCCAGTGATGAATATACTTTTGTTGCGTATTTGTTTGCCGTTCAGGTTTTCATCCACTGGTCAGTTGCGAGGCACAACGCCACTGTGTTTACGTGCAGCTGCTgttcaaagaaaagaaagcctctacatttatatttatacataaATTTATATATTACTAAAAAGCCGTTACTTCAATCAATGTATTTCTTGAATAGTCGTCCGTATTCTTCAGAATactacttaaatatataatatatagataGACCAATCATAAATTCTTCATTATTCAAAGAGCTTTTGTATTAGTGGTTCTCTGGGGAAATGTGTCCAGTCTGGGATCTTCGGTTATGGCACAGTGGTCTCTTTCCTAAGATGAGGGATATATCTGGTCTACGTTCATCACTTGAGCCCTTACCAGCAAAAAAATAAGCTTTATGTCACAAACTGGCAAGGTGCctgacatttacttttttttttttttttttttaaactctcttCCTTCCCCCTACATGCTTTATGAATGCCTTAATCCCGCCCCCCCCCTTCTACCTTCATACAGGCTTGGCACTGTGGATTTGATAATATGGTCCACCTAGTCTCTCACAGTAGTAGCCAGTTGTCCACTACATCAGCTTTTctagttttttgtgttttgcattGAAAAATGAGAAACAAGGTTTTTGATTCCTGCTAAAAAAGGGTCAGGACGCCAAAGACAGTACAACAGATTTTTCCATGGCTGCCACTTGGTGGACACAATTACTAACGAACTCATGGATCCAGCAAAGTGAAATCTCCAGTGGATGACAAGTGACGCTACAGGACAACTGACCAGCGGTAGAGACGTACGGCAGCACCGAGCCACCAAACGCATCACTGAGATGATATTTCACATGTTGGTGTCCCTCCTGTCTTTGTTCGGTGAGGGCTTTGAAGGATCCTTAGCTGCCTTGCCATTGACAGAGGCAGCGGCGTCTGCACCGGCAGCCACCGCGGCAACCAAACATTTGGTCTGCTCCTCGGTGCGGGGCTCCGGGCTGGGCTGCGTGGGCGGGGCCTGCTCCACCGGCGGCTGGACGGTCAGTTCCTGCTGCAGTTTGTGGCTGTGCAGGAGGCGAAGCTGAACGCGGAGCTCCAAGATGGCTTCCTGCTCCTCGTGGATGGCCTGGTTCAGGTCTTCCAGAATCATCTGCAGCTCTTCCTCATCTTCACTCTCACTTTCACTGTCTGACGAATATTCCTCTGTCTCACTGCGCCCCTGCTGCCGGCTCTGTATGTCTGCAATCTCTGCTCGCAGTCTCTCGATTTCTTCCTTCTCAGTAGCAATCTGTCTACGAAGCACCTGCTCAAGAGAGATCAGCTCCTCCTGCTCTGTTAGGATCTCATTTTCCTGATAATTGAGAGGAAATTATTCCATCACAGGTTGGCATACATGGAGCTTAGTAACAATGTGTGTTTGAAGGACTCACCTGTGCTAAGAGGAGGTTAATGACTTCCTCTTCATTCTCAGTCATTTCCTCTTTTGAAACATCCTCCTTTGAGAGGCTTGCTATCTCCTGGGCTATCTTACTCTC

Function

symbol description
ralbp1 Predicted to enable GTPase activator activity. Predicted to be involved in endocytosis; positive regulation of GTPase activity; and small GTPase mediated signal transduction. Predicted to act upstream of or within signal transduction. Predicted to be active in membrane. Is expressed in central nervous system; midbrain; midbrain neural keel; and neural plate. Human ortholog(s) of this gene implicated in pancreatic adenocarcinoma. Orthologous to human RALBP1 (ralA binding protein 1).

NR:

description
PREDICTED: ralA-binding protein 1, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU155525 True 2292 TUCP 0.42 3 16637108 16639812

Neighbor

gene id symbol gene type direction distance location
acss2l LOC100697261 coding downstream 74945 16541130 ~ 16562163 (-)
napgb napg,LOC102781071 coding downstream 200867 16430142 ~ 16436241 (-)
LOC120568161 LOC104950912 coding downstream 394411 16227938 ~ 16242697 (-)
LOC120567616 LOC103355753,LOC107095425,LOC101067060,LOC108232884 coding downstream 428131 16202077 ~ 16208977 (-)
txndc12 txndc12 coding downstream 493422 16137864 ~ 16143686 (-)
LOC120568912 apcdd1,LOC102777074 coding upstream 45668 16685480 ~ 16712264 (-)
LOC120568957 LOC103353943 coding upstream 112181 16751993 ~ 16754766 (-)
LOC120567917 tmem200c,LOC104967041 coding upstream 174880 16814692 ~ 16820034 (-)
LOC120568369 ptprm,LOC102799796 coding upstream 207998 16847810 ~ 17015626 (-)
LOC120567671 lrrc30,LOC104932041,LOC103353948 coding upstream 380923 17020735 ~ 17022393 (-)
G115323 NA non-coding downstream 22183 16613028 ~ 16614925 (-)
G115309 NA non-coding downstream 76635 16543613 ~ 16560473 (-)
G115278 mtcl1 non-coding downstream 124213 16508577 ~ 16512895 (-)
G115240 NA non-coding downstream 320136 16316651 ~ 16316972 (-)
G115200 NA non-coding downstream 391215 16243792 ~ 16245893 (-)
G115331 NA non-coding upstream 111088 16750900 ~ 16751275 (-)
LOC120569046 NA non-coding upstream 183490 16823302 ~ 16824660 (-)
G115391 NA non-coding upstream 397054 17036866 ~ 17039107 (-)
G115428 LOC103353952,LOC107089435 non-coding upstream 472904 17112716 ~ 17114744 (-)
G115429 NA non-coding upstream 480109 17119921 ~ 17121046 (-)
LOC120568735 LOC103355759,LOC101465864,LOC100696456,LOC102781658,LOC102293165 other downstream 301152 16330952 ~ 16335956 (-)
mppe1 mppe1,LOC102781954 other downstream 309682 16317418 ~ 16327426 (-)
cc2d1b cc2d1b other downstream 435410 16182654 ~ 16201698 (-)
G115164 btf3l4 other downstream 488987 16144160 ~ 16148121 (-)
mfsd8l2 LOC102304717,LOC102799006,LOC108238243,LOC103479065 other downstream 1332498 15290082 ~ 15304610 (-)
epb41l3b epb41l3,LOC102298622,LOC106534525 other upstream 116519 16756331 ~ 16811918 (-)
ly97.3 NA other upstream 399988 17039800 ~ 17108904 (-)
G115406 crygn,LOC100699485,LOC103353965,LOC103146339,LOC103479740 other upstream 403314 17043126 ~ 17045062 (-)
LOC120568693 rab8a,LOC103479775,LOC101170877,LOC108232971,LOC106516875,LOC107687930,LOC102219409,LOC104931433,LOC104950312,LOC105022474 other upstream 1413172 18052984 ~ 18058159 (-)
sppl2 sppl2b other upstream 1840858 18480670 ~ 18494488 (-)

Expression


Co-expression Network