G115323


Basic Information

Item Value
gene id G115323
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 16613028 ~ 16614925 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU155540
AGAAATTGTGTTTATAGAGTGTGAAAACCTTGACGCCCTTTACCTGGATGAGACACTTGCTGACGTCGCTCGCACACAGGGCTTTGTTGCAGCCAGAGGTCAGAGACAGTCCTGataggaggaagaggagagcgGCGGCGGCAGGGAGGATCAGCTGACCAGGCCTCATCCTGACGGCTCACCAGCACGGCACTGGAAACACCTACATCACAACGCCGTTAACAAGTCcaagacttttctttttaagaGGGAGAGTGGCTGTTGTCTCTTTGAACTTCTCCAGGATGGTGTTCAGCCGCCGCTCAAGTGTCCACTGTGTCCAGAGGGCGTCAGTCTCTCCGCAGCAAAAAGCGACAGGCAGTCGGCCGCCTTAAAGGCACATACTCCATTTTCTATCCAACCTCTGTGGAGGAGGACAACACCGGCctcaggtcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacaccccttcagTATCTTCAGGGTAACGGACATGAATACCAAGAGATAGCATTAGCCTAACATCTGCGCAACGCGGGAGTTGTATGCGTAAAAGTCTTGTGCGTAAACTCTTGTCTGTTTATCTCCTTTTAGCCCAAACTCTGGTCATTGCTCGCCTGCCCAGGTAGGCTCTGCCTTAGCTTCTTTTAACACAAGCAGATCTTTTCTTTCCCCGAGCCACCCCCCACTCCATTACACAGTCCTTTGTCTCCAGTCTTATCAGCGGCCTTGTGAGTGCGCTCATTAGGTGAGAAAAGGCGGCTCGGAAGCTGTGAAGCTGTGCGGACTTCCCGCTGAGAACCGCCCCCCGAGCTCATTTGAAGCAACTCTGCCGCCGCAGAAACGCTCTCTCTGATGGGCCATTTCACTCCGCAGGTGTTTACACGTGTTTTCCTAAAAGACCTCATCAATGACCACAACAGGCCCCACTTCCATCCCGCAGGGCAG

Function

GO:

id name namespace
GO:0009186 deoxyribonucleoside diphosphate metabolic process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU155540 True 1000 lncRNA 0.53 2 16613028 16614925

Neighbor

gene id symbol gene type direction distance location
acss2l LOC100697261 coding downstream 50865 16541130 ~ 16562163 (-)
napgb napg,LOC102781071 coding downstream 176787 16430142 ~ 16436241 (-)
LOC120568161 LOC104950912 coding downstream 370331 16227938 ~ 16242697 (-)
LOC120567616 LOC103355753,LOC107095425,LOC101067060,LOC108232884 coding downstream 404051 16202077 ~ 16208977 (-)
txndc12 txndc12 coding downstream 469342 16137864 ~ 16143686 (-)
LOC120568912 apcdd1,LOC102777074 coding upstream 70555 16685480 ~ 16712264 (-)
LOC120568957 LOC103353943 coding upstream 137068 16751993 ~ 16754766 (-)
LOC120567917 tmem200c,LOC104967041 coding upstream 199767 16814692 ~ 16820034 (-)
LOC120568369 ptprm,LOC102799796 coding upstream 232885 16847810 ~ 17015626 (-)
LOC120567671 lrrc30,LOC104932041,LOC103353948 coding upstream 405810 17020735 ~ 17022393 (-)
G115309 NA non-coding downstream 52555 16543613 ~ 16560473 (-)
G115278 mtcl1 non-coding downstream 100133 16508577 ~ 16512895 (-)
G115240 NA non-coding downstream 296056 16316651 ~ 16316972 (-)
G115200 NA non-coding downstream 367135 16243792 ~ 16245893 (-)
G115192 NA non-coding downstream 390594 16221788 ~ 16222434 (-)
G115331 NA non-coding upstream 135975 16750900 ~ 16751275 (-)
LOC120569046 NA non-coding upstream 208377 16823302 ~ 16824660 (-)
G115391 NA non-coding upstream 421941 17036866 ~ 17039107 (-)
G115428 LOC103353952,LOC107089435 non-coding upstream 497791 17112716 ~ 17114744 (-)
G115429 NA non-coding upstream 504996 17119921 ~ 17121046 (-)
LOC120568735 LOC103355759,LOC101465864,LOC100696456,LOC102781658,LOC102293165 other downstream 277072 16330952 ~ 16335956 (-)
mppe1 mppe1,LOC102781954 other downstream 285602 16317418 ~ 16327426 (-)
cc2d1b cc2d1b other downstream 411330 16182654 ~ 16201698 (-)
G115164 btf3l4 other downstream 464907 16144160 ~ 16148121 (-)
mfsd8l2 LOC102304717,LOC102799006,LOC108238243,LOC103479065 other downstream 1308418 15290082 ~ 15304610 (-)
G115312 ralbp1,LOC102778314 other upstream 22183 16637108 ~ 16639812 (-)
epb41l3b epb41l3,LOC102298622,LOC106534525 other upstream 141406 16756331 ~ 16811918 (-)
ly97.3 NA other upstream 424875 17039800 ~ 17108904 (-)
G115406 crygn,LOC100699485,LOC103353965,LOC103146339,LOC103479740 other upstream 428201 17043126 ~ 17045062 (-)
LOC120568693 rab8a,LOC103479775,LOC101170877,LOC108232971,LOC106516875,LOC107687930,LOC102219409,LOC104931433,LOC104950312,LOC105022474 other upstream 1438059 18052984 ~ 18058159 (-)

Expression


Co-expression Network