G115331


Basic Information

Item Value
gene id G115331
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 16750900 ~ 16751275 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU155549
ATCGTTTGGTTTAGGAAATGTCAGGAAAATGTCCATCCCAGTTTTCCAGAccccaaggtgacatcttcaaatgtttttgttttgtctaacAAATGTGGAAAACCCCAAAAATGTTCAGTTTACAGTGTAAAATGACCTGCTCGACTTCTGTCAATGCAGCTCTAAAATTAACCGATCCGATAGCTAAAACGATAAGTTGACTGACtgaaaatgaaatatgaaaCTAAGCACAAAATGCCAAATATATCATGTTCCAGCTAACTAAATTGTACTGATTTGTTGCTTTACTTTGTTTAATGTTATAGTTCactgaatatacagtattaaCAAGCAATTTTAAGAGTTTTAATAGAATATGTGTTGGCCtttattttca

Function

NR:

description
PREDICTED: tripartite motif-containing protein 16-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU155549 True 376 lncRNA 0.33 1 16750900 16751275

Neighbor

gene id symbol gene type direction distance location
LOC120568912 apcdd1,LOC102777074 coding downstream 38636 16685480 ~ 16712264 (-)
acss2l LOC100697261 coding downstream 188737 16541130 ~ 16562163 (-)
napgb napg,LOC102781071 coding downstream 314659 16430142 ~ 16436241 (-)
LOC120568161 LOC104950912 coding downstream 508203 16227938 ~ 16242697 (-)
LOC120567616 LOC103355753,LOC107095425,LOC101067060,LOC108232884 coding downstream 541923 16202077 ~ 16208977 (-)
LOC120568957 LOC103353943 coding upstream 718 16751993 ~ 16754766 (-)
LOC120567917 tmem200c,LOC104967041 coding upstream 63417 16814692 ~ 16820034 (-)
LOC120568369 ptprm,LOC102799796 coding upstream 96535 16847810 ~ 17015626 (-)
LOC120567671 lrrc30,LOC104932041,LOC103353948 coding upstream 269460 17020735 ~ 17022393 (-)
LOC120569119 LOC101466820,LOC102797643,LOC103353954,LOC100700019 coding upstream 414616 17165891 ~ 17176411 (-)
G115323 NA non-coding downstream 135975 16613028 ~ 16614925 (-)
G115309 NA non-coding downstream 190427 16543613 ~ 16560473 (-)
G115278 mtcl1 non-coding downstream 238005 16508577 ~ 16512895 (-)
G115240 NA non-coding downstream 433928 16316651 ~ 16316972 (-)
G115200 NA non-coding downstream 505007 16243792 ~ 16245893 (-)
LOC120569046 NA non-coding upstream 72027 16823302 ~ 16824660 (-)
G115391 NA non-coding upstream 285591 17036866 ~ 17039107 (-)
G115428 LOC103353952,LOC107089435 non-coding upstream 361441 17112716 ~ 17114744 (-)
G115429 NA non-coding upstream 368646 17119921 ~ 17121046 (-)
G115430 LOC102789304,LOC101466350,LOC102216210,LOC102305671,LOC100690840 non-coding upstream 371447 17122722 ~ 17123058 (-)
G115312 ralbp1,LOC102778314 other downstream 111088 16637108 ~ 16639812 (-)
LOC120568735 LOC103355759,LOC101465864,LOC100696456,LOC102781658,LOC102293165 other downstream 414944 16330952 ~ 16335956 (-)
mppe1 mppe1,LOC102781954 other downstream 423474 16317418 ~ 16327426 (-)
cc2d1b cc2d1b other downstream 549202 16182654 ~ 16201698 (-)
G115164 btf3l4 other downstream 602779 16144160 ~ 16148121 (-)
epb41l3b epb41l3,LOC102298622,LOC106534525 other upstream 5056 16756331 ~ 16811918 (-)
ly97.3 NA other upstream 288525 17039800 ~ 17108904 (-)
G115406 crygn,LOC100699485,LOC103353965,LOC103146339,LOC103479740 other upstream 291851 17043126 ~ 17045062 (-)
LOC120568693 rab8a,LOC103479775,LOC101170877,LOC108232971,LOC106516875,LOC107687930,LOC102219409,LOC104931433,LOC104950312,LOC105022474 other upstream 1301709 18052984 ~ 18058159 (-)
sppl2 sppl2b other upstream 1729395 18480670 ~ 18494488 (-)

Expression


Co-expression Network