LOC120568596 (LOC103479750,LOC106948690,LOC102229933,LOC103146349,LOC108232807,LOC105930991,LOC100691642,LOC103353958,LOC107383564)


Basic Information

Item Value
gene id LOC120568596
gene name LOC103479750,LOC106948690,LOC102229933,LOC103146349,LOC108232807,LOC105930991,LOC100691642,LOC103353958,LOC107383564
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 17406497 ~ 17483553 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU155758
GAAATCTATCCAAACGACTCCAAGTGTGGCTCTCCATTGGATGTGTTTTAATACGCGTTTATGGACTTCAACGAATTTGCAACCACTGTGAATCCCCTTAAAGGCTACTTGAAGTGTCTTTCGTGCACCATTCCGATGAACGCTGAGCCAAGAGCAGCGCTGCGTAAAGCCAAATAGCCTGTGTGGACACCAGTCGATATTCGGCGGCGTGTGTAAGCGCGAAAGAAAAGGTCTAAATGTGAGCGAGTCCTGGAACGCTATTTGGAAGGAAAAGCAGCTTTAGCGAGACGCAAAAGTTTaaagaaaagttgagagaaagggaaAACGTGCTTTTCATGTGAATGCGCGCTTTTTCTGCCTTATTGGTCCATCCGGTGAAATTTGAATACATTGGGAAGTATGGAAATATTTCTGCAACTACTCTTGGCTGTAAATAACCTGTTGAATGAGTAGTTCGTCCCAGGAGTGTAAGTTAAATGATGCTGACTACTGCTAAAACCACAATTGACAGGAGATCAAGCTAAGACATCTGACAGCCACTGAATTATCACTCCTCTCTACACATCACATCTGACCGTTAGTTGACCCTTTCATCAACGCCCAACACTTGTGAAGAAGCTCCCTTGTTGACACACCTCATCAGCCAGGCAGAAGTGGCAGCAATCGAAGACAAAATAACTGAATGAGTGCTAACCATTGCCTGGAGCTGCTCAAACAAAAGTAGCAACATGCTGGCACAGTTCCCAAATGCACCATTGCCCCATTCAAAGCTGCATTTAATTTAGAAAATTCTCAGCAATATTGTCATTTCTGTGACGAAGCATCAGctgtaaagacaaaaaaaaagttccacAGACACCATACAGAACTAGATCAGAGATGCTTTGGCCCGCATTGTTCACTCTGCAAGCTGTGTGCACCAGTGTGGCACATGCCATGCAACATTACCCGGCAGCCTGGGGACACTATGATGTGTGCAAGTCCCAGATCTATACAGAGGAGGGCCTGACGTGGGACTACATGGCCTGTCAGCCAGAAGCCACCGACATGACAAAGTACCTGCGAGTGGCCCTCGACCCCCCAAATATCACGTGTGGAGATCCGCCAGAAACATACTGCGCTTTGGAGAATCCTTATATGTGCAACAATGAATGTGATGCTACCACAGAGGAGCTGGCTCATCCTCCAGAGTTGATGTTTGACTTTGAGGGTCGCAATCCCACAACATTTTGGCAGTCCACTTCATGGAAGAAATACCCAAAGCCCCTCCAGGTTAACATCACGCTGTCGTGGAACAA
>XM_039816209.1
CGACACGGTCCACTCAATTACTGTGGTGACCTTCAGATGGGCGCGGTTGTTCTTATCGTGCAATCTCCACCAGTTGGCAATACAGCACAATTAAAATGCGTGTCCAAAGCGACCTGTCACCGCGGCTGTGGGGTGACATCTATGACTCTTCGCCAAGGGAGCCTGGTAGACGCACCTAACTGTAGTTATTCTTTCAGCTCTGCCTTCAAAATTCGCCGAATAATTATACCAACAACTCCGGCCGGAGGAGTTTTTCtccctttcctttttcttttctttttgcagcaCAGCTCCAATCCCACACGTTCTTAGATGGAAGGATGCTGACTACTGCTAAAACCACAATTGACAGGAGATCAAGCTAAGACATCTGACAGCCACTGAATTATCACTCCTCTCTACACATCACATCTGACCGTTAGTTGACCCTTTCATCAACGCCCAACACTTGTGAAGAAGCTCCCTTGTTGACACACCTCATCAGCCAGGCAGAAGTGGCAGCAATCGAAGACAAAATAACTGAATGAGTGCTAACCATTGCCTGGAGCTGCTCAAACAAAAGTAGCAACATGCTGGCACAGTTCCCAAATGCACCATTGCCCCATTCAAAGCTGCATTTAATTTAGAAAATTCTCAGCAATATTGTCATTTCTGTGACGAAGCATCAGctgtaaagacaaaaaaaaagttccacAGACACCATACAGAACTAGATCAGAGATGCTTTGGCCCGCATTGTTCACTCTGCAAGCTGTGTGCACCAGTGTGGCACATGCCATGCAACATTACCCGGCAGCCTGGGGACACTATGATGTGTGCAAGTCCCAGATCTATACAGAGGAGGGCCTGACGTGGGACTACATGGCCTGTCAGCCAGAAGCCACCGACATGACAAAGTACCTGCGAGTGGCCCTCGACCCCCCAAATATCACGTGTGGAGATCCGCCAGAAACATACTGCGCTTTGGAGAATCCTTATATGTGCAACAATGAATGTGATGCTACCACAGAGGAGCTGGCTCATCCTCCAGAGTTGATGTTTGACTTTGAGGGTCGCAATCCCACAACATTTTGGCAGTCCACTTCATGGAAGAAATACCCAAAGCCCCTCCAGGTTAACATCACGCTGTCGTGGAACAACAAACGTTTTGAGATAAAGGACCGCTTTGCCCTCTTTGCCGGGCCTCGGCTACACAACATGGCCTCACTTTACGGCCAACTGGATACCACCAAGAACCTAAGGGACTTCTTCACCATCACTGATCTGAGGATTAAGCTGCTGAAGCCAGCCACTGGAGCCACCATGGTGGATGAGAATAACCTGTCCAGATACTTCTACGCCATCTCTGACATCAAGGTGCAGGGCAGGTGCAAGTGTAACCTGCATGccaacagctgtgtgtttgacAAGGGGAAGCTGGGCTGTGAGTGTGAACACAACACCACAGGGCCAGACTGCAGCCGCTGTAAGAGGCACTACCACGGAAGAGCCTGGAGTGTGGGCTCCTACCTCCCTATACCCAAAGGAACGGCAAATATATGTATTCCCAGTAATCATGGACCAGTGCATCGAGCAAATGCTTCATCTCTTGGTGTTGCAAATCGTAACCAAGCTCGGGTGTGTGACAACGCGATGCTGCGCTGTCAGAACGGTGGCACTTGCCACCACCATCAGCGGTGCCATTGTTCCCCTGGCTTCACCGGTGTCCTGTGTGAGAGAGCTCGCTGCCAGGGCGCTGAGGAGTGTGATGACCACTTGTCTGGACGGGCCTCCTTCCATCATCCCCCCATCAGCCAGCTCGCTTTTACCCTTGTAGTACTCCTGCTATTGATAGTTTCCCTTTGCTGAGAGACCTGAACAGCCTCCCATCCTCAAACAAAACCCTAAGTACACATGTGTTGAGACTGAACTCTCAACCTTAAGCAAATCAAGGACAAAGGCTGTGACAATGTGCTCAGCATACAATATAAGCAACTATTTTGTATATCCAAGGTGACAGTGGTGAGTGACAGTGTTGCAACAGGTTGTGCACTGATCATATACTGAATGCTAGATGGATTTGTGAAAGGCTTGGACTACTGTCTTATAATGTCACAGAGGAAGCGGTTGGAGCCCTCGCTTTGTGATTATGTCATTGGCTGACACTTCATTAAAGGCAGACTGGAGACTCAGATAGAGCTACCCACACTGAgagactgtactgtactgtacaaaaCTAGACACATGATTTCTAAGTATCATctgaagttattaaaaaaatgattatGTGGACGGGGACATCTTAAAACATCTTGCCTCACTGCCTCTTTCCTTACTTGCTATCCTCTTCATCTCCTTTCCTAACTCTTCCCTTTTTCCTTCACCTTCTCCTCCCTGCGCTTTGTTGACTCTGGTGATTTTAATTTGCTGAAGGGTGTCTGTTGTTTTGCCAAATGCTGCACATGTATTATTATCATCAAGGCCCTTGACAAGTACCAATGTAGTACTTCTAGTAATCCTTTGGCCTACTTTTTCAGAGGCTTTGTAGTCATGCTTGAGCTCACCTGTTCGTGGGGGGGAAAGTTGTAACATACTGTAACTGTATTTAATTTTTGTATAAAACAGATATTTTCATGACTACGCAAAACAAAAAGATGTATTACTTGTTTTCTATTGCTGCCAACCTGTCCTAGATGTGGACTATGAGTGTGCAGAGTTTGGCTGTATTATTTCTTTGCTTGTGTGGCACATGGTTCTCTTTATTTGAGAGCTGCTGTCAAAACTATGTTTacatacacacttacacaaTACACTTCCACcaaagggaaaaagaaaaaaaacatgtctttgTCTTGTTGTTGAACAGTAGTAATCTTATTAAGTAGTAACATGACATTTGAGACAAGATGTGTAGAATAAAACAGTGTATTGATTGTAGATAGGTACAAGCCAATGACAATAGCGGAATGtcattttaaaggatttttttaaGCTATCAATGCCAATCGTTGACCTATTCACTGAAGCAACAGTTGCTGGTAGCAATATATCAACAATCAACAACAAATTAATTCCTAGTTCTATAACTACAGTTGCTTTTTTATGTGTTGTAACCATCCTTGTTGTGCTCATGAAACATAAAAAATCTCAAGCCAAAATCCCATCTGCTATATGTAAATTTAACGAAAAGACTTTGACAAAAAGGAGATTGCATGGCTGTCGCAGAGGTTGTCCATCTCAAATCTGTAATCAAATCTAATCCTTGAATCAAATGGAAGAAGGGGAAGGTTTTCTGAGCTGGTACGGTTAAAAGCCTGCATCCTGCTGCGGGAGCCTCAGAGAAGCGAAGCGCTAAGGTAATGAGCTTTAATTCATGGAGGGTCAATGAATAGAAATGAAGTTGCATCCCACTGGGTGACATACTGAGCACTGAGACCAATTTCATTTGAGAGATTAATTTCTTT

Function

NR:

description
PREDICTED: netrin-G1-like isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU155758 False 1298 TUCP 0.46 3 17407491 17440463
XM_039816209.1 True 3443 mRNA 0.45 8 17406497 17483553

Neighbor

gene id symbol gene type direction distance location
amy2a NA coding upstream 80838 17317113 ~ 17325659 (+)
LOC120568298 LOC103353952,LOC100690840,LOC102305671 coding upstream 266951 17097270 ~ 17139546 (+)
LOC120568635 NA coding upstream 310673 17064933 ~ 17095824 (+)
LOC120568716 acvr2b,LOC106516905,LOC108232890 coding upstream 345748 17047694 ~ 17060749 (+)
LOC120567614 crygn,LOC100699485,LOC103353965,LOC103146339,LOC103479740 coding upstream 361435 17043061 ~ 17045062 (+)
dcaf8 dcaf8,LOC102795666 coding downstream 60117 17543670 ~ 17552930 (+)
lrrc42 lrrc42 coding downstream 88024 17571577 ~ 17574473 (+)
tceanc2 tceanc2 coding downstream 97106 17580659 ~ 17583761 (+)
LOC120567749 LOC103353067 coding downstream 304232 17787785 ~ 17967693 (+)
larp6b NA coding downstream 488502 17972055 ~ 17973556 (+)
G115446 NA non-coding upstream 181759 17217910 ~ 17224738 (+)
G115445 NA non-coding upstream 196286 17204663 ~ 17210211 (+)
G115442 LOC103353955 non-coding upstream 219844 17183152 ~ 17186653 (+)
G115437 LOC101466820,LOC102797643,LOC103353954,LOC100700019 non-coding upstream 236679 17168573 ~ 17169818 (+)
G115404 NA non-coding upstream 248297 17157628 ~ 17158200 (+)
G115488 NA non-coding downstream 853 17484406 ~ 17484811 (+)
G115506 NA non-coding downstream 74372 17557925 ~ 17559880 (+)
G115513 LOC103353967,LOC104931261,LOC102192286,LOC100692446,LOC101469749 non-coding downstream 81702 17565255 ~ 17565482 (+)
G115516 NA non-coding downstream 95357 17578910 ~ 17579589 (+)
G115585 NA non-coding downstream 484187 17967740 ~ 17968042 (+)
LOC120568363 ankrd12,LOC103396444,LOC102778611 other upstream 794291 16610376 ~ 16612206 (+)
LOC120568419 LOC102779359 other upstream 878815 16439025 ~ 16527682 (+)
LOC120568164 LOC104950913,LOC104937610,LOC103355754 other upstream 1177946 16226307 ~ 16228551 (+)
st6galnac5a st6galnac5,LOC103370426,LOC102788813 other upstream 1484966 15865586 ~ 15921531 (+)
st6galnac3 st6galnac3 other upstream 1563403 15764683 ~ 15843094 (+)
LOC120567767 NA other downstream 543727 18027280 ~ 18029895 (+)
G115729 NA other downstream 821596 18305149 ~ 18354344 (+)
skila skil,LOC102782637 other downstream 1083080 18566633 ~ 18602263 (+)
LOC120568691 NA other downstream 1176876 18660429 ~ 18674140 (+)
LOC120568911 NA other downstream 1236812 18720365 ~ 18725447 (+)

Expression


Co-expression Network