G115506


Basic Information

Item Value
gene id G115506
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 17557925 ~ 17559880 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU155782
CTTGACTGGAGGCCTCTGGAAGCTGTAAGAGACAATGTTAACTAGTACAAGTTCTCTGCTGAACAGACAGATGCATATTTACAGTAGACTGATGAATTAGGAAGTTTGTTAGATGGAGAGATTCTAGTGCGACTACACTACAACATGCATATGTCATCAAAGAAAGAGGATACATAAACCTCAAAGTAAACCAACTAGTTTCTACAAATAGGAAATAGTGCAATGCAAGTACGATATTTAGCTGTGATAAACATCAGTACCCGACACGTCTGATAGGACCACAAGGACATGCTTTTCTCCAcatttgattgtttttgtaGGAGTCAAGAACTTGCAAGACACACATGTTACAAAACTCCTTAAATCAAGCTTTTAAAGTAATTAGAAATGCTCATTGTAACAGCTAGGTGGATGGAAAAGAGCTACATTAGTAATGTGTGCACAAGAAAGCCCAGACACAGGAGTTTAATTAGTGATGCCTGCAGGGTGAAGTTGTTACTGTAGACGTGGTGAAACCAAATGAAAATGTACTGTGAAAAAGAGGGggttctctgcgcttctgcaatccacaacaatccggtgcaaccagggcaggacaaaacataaaaaagaatcGCCGGTGCAACACAGCAGATTCTTTTTTACTCTGAAAATATACTGTGTCAGATGAGAGAATGCAAGGAGCCCCTCAGTGTTCAAGTCTAAGAAGTCTAAAGAAGACAGCATGCACATGCCACACATCCTTACCTTGTTAAACAAATACATTATCAGCACACGCTTTGCCAAGACATTTTTAACCTGAATGGGACAATCAAGTATAAAGTTGTTTTGCTTTCAAAACTgaacaacaaaatgtaacaCAAATGTGGAAATAATGGCTTTTCACACGTAACCCTAACTTAACCCTGATGTGAGCTTTACTGTTTTAAACAAGAAGTCAAAGACATCAGTAACCAGGCTACAAGATAGGACACCTGTTCCTAATTTCGTTGGCACCACTCCTGTCTCATCTTTCTGGTGCCAGAAGAGAAGTGATTGGTGCGGAGAGCAAAgtggagagaaaagaagaaaaaaaaaaggagatggAGCTCTGTCCATTTTCACACGTGTGCACATCCTGGCCAATCAGTGCGTAAAGCAGAGGTGATGGTCAAATTGTTGGTTTAGGAAGACGAGACTGACCCGTCTGTATGACTACTATTGTTAGCCCGAGGTTAATGAATGTTAAGTATGAAAAGCCTTTTGTCAATAATGTATAAAAACATTGTAATATCTATATATTGTAATCCTGTATTGTAACAACTAGACTGAAGTACCTGTTCTTTTCTGTTCTGGAGGAACTGAGCCAGGAGACTTGGTTTGGACGGTTCCTGCTTGGGACTGGGAACTGAGGCAGGGGAAGCCAGGGGACTGCCATTGACCTGTGACTGTGGAGGTGGACCAGAGTTTTGGGGCTCTCCTCATGATGTGTGGGCTCTGCACTGTGCCGAACCACGGTGAGCATTGGTCCATAGGAGCAGTAAGACGCCGCAGGGCGGGAGAAGCAAAGGGGCTGTCCAGGTCAGGAGTGAATGGTGCCGTCAGAGGGCTCTGTGAGCAGCCAACCATGGAGCGTGCAAAGACCGAAGCTGGAGTTCTCATCAGTAAAGTAGGCCTCGGGCTCATAAGATCTTCTGTACCCGAGGTAACttttaagaagaagaaaaaagcgacACAGAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU155782 True 1720 lncRNA 0.43 2 17557925 17559880

Neighbor

gene id symbol gene type direction distance location
dcaf8 dcaf8,LOC102795666 coding upstream 4995 17543670 ~ 17552930 (+)
amy2a NA coding upstream 232266 17317113 ~ 17325659 (+)
LOC120568298 LOC103353952,LOC100690840,LOC102305671 coding upstream 418379 17097270 ~ 17139546 (+)
LOC120568635 NA coding upstream 462101 17064933 ~ 17095824 (+)
LOC120568716 acvr2b,LOC106516905,LOC108232890 coding upstream 497176 17047694 ~ 17060749 (+)
lrrc42 lrrc42 coding downstream 11697 17571577 ~ 17574473 (+)
tceanc2 tceanc2 coding downstream 20779 17580659 ~ 17583761 (+)
LOC120567749 LOC103353067 coding downstream 227905 17787785 ~ 17967693 (+)
larp6b NA coding downstream 412175 17972055 ~ 17973556 (+)
LOC120569107 nrtn,LOC103353066 coding downstream 416096 17975976 ~ 17985540 (+)
G115488 NA non-coding upstream 73114 17484406 ~ 17484811 (+)
G115446 NA non-coding upstream 333187 17217910 ~ 17224738 (+)
G115445 NA non-coding upstream 347714 17204663 ~ 17210211 (+)
G115442 LOC103353955 non-coding upstream 371272 17183152 ~ 17186653 (+)
G115437 LOC101466820,LOC102797643,LOC103353954,LOC100700019 non-coding upstream 388107 17168573 ~ 17169818 (+)
G115513 LOC103353967,LOC104931261,LOC102192286,LOC100692446,LOC101469749 non-coding downstream 5375 17565255 ~ 17565482 (+)
G115516 NA non-coding downstream 19030 17578910 ~ 17579589 (+)
G115585 NA non-coding downstream 407860 17967740 ~ 17968042 (+)
G115599 ranbp3,LOC102787870 non-coding downstream 456683 18016563 ~ 18019614 (+)
G115600 NA non-coding downstream 460025 18019905 ~ 18020110 (+)
LOC120568596 LOC103479750,LOC106948690,LOC102229933,LOC103146349,LOC108232807,LOC105930991,LOC100691642,LOC103353958,LOC107383564 other upstream 74372 17406497 ~ 17483553 (+)
LOC120568363 ankrd12,LOC103396444,LOC102778611 other upstream 945719 16610376 ~ 16612206 (+)
LOC120568419 LOC102779359 other upstream 1030243 16439025 ~ 16527682 (+)
LOC120568164 LOC104950913,LOC104937610,LOC103355754 other upstream 1329374 16226307 ~ 16228551 (+)
st6galnac5a st6galnac5,LOC103370426,LOC102788813 other upstream 1636394 15865586 ~ 15921531 (+)
LOC120567767 NA other downstream 467400 18027280 ~ 18029895 (+)
G115729 NA other downstream 745269 18305149 ~ 18354344 (+)
skila skil,LOC102782637 other downstream 1006753 18566633 ~ 18602263 (+)
LOC120568691 NA other downstream 1100549 18660429 ~ 18674140 (+)
LOC120568911 NA other downstream 1160485 18720365 ~ 18725447 (+)

Expression


Co-expression Network