G115577


Basic Information

Item Value
gene id G115577
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 17607456 ~ 17608257 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU155864
tgggagtcgaactgaatcattacactGGCTGAGCAATGCCAGCCAGGGGTATCCAGATACATTGCGCAACAAGGAACAATGGCTGCCAGGTCGACCAGAGAGAcccataaatggacgcCGGAGGAAACCCAGCAGCTGATCCACTTTCTGGCTGAAAACGAGCAGTAATCATTTGAATTCATTCCTGTTCATGTacctgtacattgttgttggttatgatacaggacactaatgaaagaaatggggttggagggaaaggttactggccaacaggcatcacactatggtctggaatttcagaatagctgtagttttgtttgtttgtggtcttgtgtgtcttttagttttatacatttgagtgccttttttaGTGTGACATCTAAGTTATTGTTCTAATAGTTGATAATGGTTCTCTACATTTTTCTataatgtttttgcatgttatgtttatttttttgggaataaagacatttttttttaacaaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU155864 True 486 lncRNA 0.39 2 17607456 17608257

Neighbor

gene id symbol gene type direction distance location
cdcp2 cdcp2,LOC103375059 coding downstream 16091 17583790 ~ 17591365 (-)
tmem59 tmem59 coding downstream 27881 17575306 ~ 17579575 (-)
yipf1 yipf1 coding downstream 36068 17567352 ~ 17571388 (-)
zgc:113691 LOC103353967,LOC104931261,LOC102192286 coding downstream 40410 17564711 ~ 17567046 (-)
ndc1 ndc1 coding downstream 42919 17555980 ~ 17564537 (-)
ranbp3b ranbp3 coding upstream 391643 17999900 ~ 18019896 (-)
LOC120568865 tpm4,LOC107383605,LOC102218802,LOC103146061,LOC103479776,LOC100703626,LOC102199996,LOC106537044,LOC101474423,LOC102789012,LOC106914771,LOC108232925,LOC106936184 coding upstream 452438 18060695 ~ 18070437 (-)
LOC120568287 LOC103353056 coding upstream 542859 18151116 ~ 18170489 (-)
LOC120568289 LOC102296215,LOC102788438,LOC102202758,LOC101476248,LOC100704618 coding upstream 563392 18171649 ~ 18175326 (-)
LOC120568294 LOC104961359,LOC103353055,LOC100705071,LOC102788160 coding upstream 628533 18236790 ~ 18244258 (-)
G115570 lrrc42 non-coding downstream 33331 17573463 ~ 17574125 (-)
G115568 NA non-coding downstream 34327 17572897 ~ 17573129 (-)
G115563 dcaf8 non-coding downstream 54506 17548220 ~ 17552950 (-)
LOC120568661 NA non-coding downstream 250247 17356351 ~ 17357209 (-)
G115458 NA non-coding downstream 304898 17302264 ~ 17302558 (-)
G115624 NA non-coding upstream 357556 17965813 ~ 17967692 (-)
G115640 NA non-coding upstream 466811 18075068 ~ 18076412 (-)
G115641 NA non-coding upstream 468283 18076540 ~ 18077059 (-)
G115644 ap1m1,LOC107750937 non-coding upstream 472941 18081198 ~ 18083844 (-)
G115691 NA non-coding upstream 624611 18232868 ~ 18234515 (-)
ly97.3 NA other downstream 498552 17039800 ~ 17108904 (-)
G115406 crygn,LOC100699485,LOC103353965,LOC103146339,LOC103479740 other downstream 562394 17043126 ~ 17045062 (-)
epb41l3b epb41l3,LOC102298622,LOC106534525 other downstream 795538 16756331 ~ 16811918 (-)
G115312 ralbp1,LOC102778314 other downstream 967644 16637108 ~ 16639812 (-)
LOC120568735 LOC103355759,LOC101465864,LOC100696456,LOC102781658,LOC102293165 other downstream 1271500 16330952 ~ 16335956 (-)
LOC120568693 rab8a,LOC103479775,LOC101170877,LOC108232971,LOC106516875,LOC107687930,LOC102219409,LOC104931433,LOC104950312,LOC105022474 other upstream 444727 18052984 ~ 18058159 (-)
sppl2 sppl2b other upstream 872413 18480670 ~ 18494488 (-)
LOC120568909 LOC103353029,LOC104955147,LOC101484702,LOC102780695 other upstream 1094807 18703064 ~ 18720587 (-)
G115941 NA other upstream 1236648 18844905 ~ 18846277 (-)
LOC120568972 LOC104949378,LOC103135673,LOC106524506,LOC103479814,LOC106906961,LOC102205181 other upstream 1323717 18931974 ~ 18935491 (-)

Expression


Co-expression Network