G115585


Basic Information

Item Value
gene id G115585
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 17967740 ~ 17968042 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU155889
AGTTAAATTCTTAACCGATAAGTCCTTCATAGTACAAGTTTGCTCTTTTGCCCTTCGCCCTTAGGGACATCAGGAAACTGTCTGCTTTATCACCCGTTTCCAGGAATGTTGCCCGTTAATTTGCCCAATTTTTCCCCCCTGATGTATGACTTATGCATTTCTAAGAGCTTATTGTTCCAACTATGCAACTTAATGGTCAGATACTTAaaagtgtgtatgtctgtgtgagtTTGCAGGGGTAAATcccgagaatccagctgccctCCTCCTACAAGGCCCCCCAAAACTTAATTTTTCCAGGGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU155889 True 303 lncRNA 0.43 1 17967740 17968042

Neighbor

gene id symbol gene type direction distance location
LOC120567749 LOC103353067 coding upstream 47 17787785 ~ 17967693 (+)
tceanc2 tceanc2 coding upstream 383979 17580659 ~ 17583761 (+)
lrrc42 lrrc42 coding upstream 393267 17571577 ~ 17574473 (+)
dcaf8 dcaf8,LOC102795666 coding upstream 414810 17543670 ~ 17552930 (+)
amy2a NA coding upstream 642081 17317113 ~ 17325659 (+)
larp6b NA coding downstream 4013 17972055 ~ 17973556 (+)
LOC120569107 nrtn,LOC103353066 coding downstream 7934 17975976 ~ 17985540 (+)
im:7138239 LOC104950317,LOC103353072 coding downstream 67910 18035952 ~ 18041729 (+)
LOC120567609 LOC103353062,LOC104950308 coding downstream 75355 18043397 ~ 18045228 (+)
cib3 cib3,LOC107687907 coding downstream 80024 18048066 ~ 18052429 (+)
G115516 NA non-coding upstream 388151 17578910 ~ 17579589 (+)
G115513 LOC103353967,LOC104931261,LOC102192286,LOC100692446,LOC101469749 non-coding upstream 402258 17565255 ~ 17565482 (+)
G115506 NA non-coding upstream 407860 17557925 ~ 17559880 (+)
G115488 NA non-coding upstream 482929 17484406 ~ 17484811 (+)
G115446 NA non-coding upstream 743002 17217910 ~ 17224738 (+)
G115599 ranbp3,LOC102787870 non-coding downstream 48521 18016563 ~ 18019614 (+)
G115600 NA non-coding downstream 51863 18019905 ~ 18020110 (+)
G115633 LOC102219409,LOC104931433,LOC103479775,LOC104950312,LOC105022474 non-coding downstream 84826 18052868 ~ 18058243 (+)
G115636 tpm4,LOC107383605,LOC103146061,LOC102218802,LOC103479776 non-coding downstream 92667 18060709 ~ 18065238 (+)
G115660 LOC102296215,LOC102788438,LOC100704618 non-coding downstream 203637 18171679 ~ 18174071 (+)
LOC120568596 LOC103479750,LOC106948690,LOC102229933,LOC103146349,LOC108232807,LOC105930991,LOC100691642,LOC103353958,LOC107383564 other upstream 484187 17406497 ~ 17483553 (+)
LOC120568363 ankrd12,LOC103396444,LOC102778611 other upstream 1355534 16610376 ~ 16612206 (+)
LOC120568419 LOC102779359 other upstream 1440058 16439025 ~ 16527682 (+)
LOC120568164 LOC104950913,LOC104937610,LOC103355754 other upstream 1739189 16226307 ~ 16228551 (+)
st6galnac5a st6galnac5,LOC103370426,LOC102788813 other upstream 2046209 15865586 ~ 15921531 (+)
LOC120567767 NA other downstream 59238 18027280 ~ 18029895 (+)
G115729 NA other downstream 337107 18305149 ~ 18354344 (+)
skila skil,LOC102782637 other downstream 598591 18566633 ~ 18602263 (+)
LOC120568691 NA other downstream 692387 18660429 ~ 18674140 (+)
LOC120568911 NA other downstream 752323 18720365 ~ 18725447 (+)

Expression


Co-expression Network