G115690


Basic Information

Item Value
gene id G115690
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 18233743 ~ 18234058 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU156017
ACCCTGCCTTGAGGGCAGCGCCTTGGATGGATATGGGATGGTGAGGTTGTTTGTCCTTTATACAGGCGCACGAGGGATCACTGAAGATATGCCCATTTTGCGCTGCCTCATTCTGGAGATCCCGTAGTCAGGCTTGAAAGACTGATTATCATTACTTAGACTGTCTCGCAATTCTTAGCCCACTACCCCACGCAGACCCCAACCACTCCAcacgttctgattggctgtgttcTCTACAGCCAGATTTCCTGCTGTTAATTGTGTTTGTTCCCACTTGTTGTCATGTGTAAATTTAATGTCAAAATGTATATTACCT

Function

GO: NA

KEGG:

id description
ko04744 Phototransduction

RNA

RNA id representative length rna type GC content exon number start site end site
TU156017 True 316 lncRNA 0.47 1 18233743 18234058

Neighbor

gene id symbol gene type direction distance location
LOC120568290 dnah8 coding upstream 2743 18175983 ~ 18231000 (+)
LOC120568288 klf2,LOC104966780 coding upstream 83899 18147898 ~ 18149844 (+)
ap1m1 ap1m1,LOC107696211 coding upstream 143700 18075107 ~ 18090043 (+)
cib3 cib3,LOC107687907 coding upstream 181314 18048066 ~ 18052429 (+)
LOC120567609 LOC103353062,LOC104950308 coding upstream 188515 18043397 ~ 18045228 (+)
LOC120568291 NA coding downstream 24072 18258130 ~ 18264859 (+)
LOC120568293 LOC103353052,LOC101477959 coding downstream 31859 18265917 ~ 18277003 (+)
LOC120568295 nmrk2,LOC106914787,LOC103146068,LOC102216674,LOC106516864,LOC103479788,LOC107094235,LOC102787357 coding downstream 45044 18279102 ~ 18281820 (+)
loxl5b NA coding downstream 54025 18288083 ~ 18293040 (+)
myo9b NA coding downstream 94200 18328258 ~ 18360230 (+)
LOC120568296 NA non-coding upstream 37 18232617 ~ 18233706 (+)
G115660 LOC102296215,LOC102788438,LOC100704618 non-coding upstream 59672 18171679 ~ 18174071 (+)
G115636 tpm4,LOC107383605,LOC103146061,LOC102218802,LOC103479776 non-coding upstream 168505 18060709 ~ 18065238 (+)
G115633 LOC102219409,LOC104931433,LOC103479775,LOC104950312,LOC105022474 non-coding upstream 175500 18052868 ~ 18058243 (+)
G115600 NA non-coding upstream 213633 18019905 ~ 18020110 (+)
G115705 NA non-coding downstream 28338 18262396 ~ 18262661 (+)
G115723 NA non-coding downstream 62088 18296146 ~ 18297509 (+)
G115733 NA non-coding downstream 145054 18379112 ~ 18385969 (+)
G115781 NA non-coding downstream 219975 18454033 ~ 18455620 (+)
LOC120567854 NA non-coding downstream 224123 18458181 ~ 18465450 (+)
LOC120567767 NA other upstream 203848 18027280 ~ 18029895 (+)
LOC120568596 LOC103479750,LOC106948690,LOC102229933,LOC103146349,LOC108232807,LOC105930991,LOC100691642,LOC103353958,LOC107383564 other upstream 750190 17406497 ~ 17483553 (+)
LOC120568363 ankrd12,LOC103396444,LOC102778611 other upstream 1621537 16610376 ~ 16612206 (+)
LOC120568419 LOC102779359 other upstream 1706061 16439025 ~ 16527682 (+)
LOC120568164 LOC104950913,LOC104937610,LOC103355754 other upstream 2005192 16226307 ~ 16228551 (+)
G115729 NA other downstream 71091 18305149 ~ 18354344 (+)
skila skil,LOC102782637 other downstream 332575 18566633 ~ 18602263 (+)
LOC120568691 NA other downstream 426371 18660429 ~ 18674140 (+)
LOC120568911 NA other downstream 486307 18720365 ~ 18725447 (+)
LOC120568770 NA other downstream 782981 19017039 ~ 19052242 (+)

Expression


Co-expression Network