G115729


Basic Information

Item Value
gene id G115729
gene name NA
gene type unknown
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 18305149 ~ 18354344 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU156065
ACCTCTTTCATCTCCACGTGAACTTGCTTCAAACCCCCCAACACATCCTCCAGATCTGTCACCACTTGTCTGATTTGATCCCTCACCGAATCCTGCCTCCTCTTCTGCTTCACCACCTCTGAACCCTGGTGCTGGTGGTCGCTGTTGGTTGTCGATTTTGAGGGCTCTGGACTGGTGATGCCAGATGGAGGGAAGCAGACACCCTTCTGTCGGCTTTGGTTCAAGTGTTTTTGTGGGACTTCAGTAGAGAAGAAACCTTTGTGAGAGCCACTGCGTCCATTACAGCCCTCCTCTGATCCAGCCTTCAGACTTCCCCGGTCCTGATGGCTATCTCTTTCCTCCCCTCCCTGAAAGAACACAGGCCTTGGTCCACAGTGGCCATTTGGCATGTGTAAATGACCCAGATGAGGATTGTGTTGCTCCGCATGATAGTTCTCAGAGGTGCATCTACaactttcctcctcctcatccacgGAGACATACCTGACCGTCCTCCTGTGCCTGTAcccttgacctttgacctgaaGATGGGGGAGAGGATGTGGTATCCCGGCGCTAAAGAGGTGTGCCCTGGTGTCGCTGCGCACCACACAGCCACACTGTTCTCTGACAGACGGGTAGTGTCTCACCCCAGGCTCCAGCGGGTAGCTCCACTGGGCAGGGTTCAACTCCCAGGGGTAAACTTGGCTCAAGTCATCTGACTGGCTGTAAAGGCCTGGCCCTGCGAACACAGGCCTCCTCTGTGGGCTGCGATGACCGCTTCTCTCAGCTCTGTCCACTATGAAAGCTCTCCCTCCTACGTCTTTAACCCGAGGAGCCTGGGTGTCTCTCCTGCAGTCCAGGGATGGGTGGTCTGTCTGTTTGGCTGATGCTGGTTGGTGTCCCGGCCCACCGTGATGGCTGTACGCTGGCTGCTCATAGTGGACGCAGTGCTGGCAGGAGCAGGGGTTGGTGGTGTTGATGTGCTGAATAAATCGGTGGTGTCCCGTTGTTTGTGCACCTTCTgtgtacatgtccaaagaagTCAAGAGTGTGGAAAACGCCTTAGAAAACAATTGGTTTCCTCCCCTCTCTGCTCCCTCTAGCCCAGTCATTCACTCGCTCTGTTTTCCTCATCTGCGTCTTCCCACAAGAAAACTTTTcttcagctctttttttttctccctctctaccCAGGACTTCTCCCTCCCCTTCCTTCCTGTCTGTTGTTTCCCTTCTTCTCTCCTGTAGTTGTTAATCTCTGCACCCGTTCTTTTCTCTCCCTGGAccttttttctcctacttctcCTAACTTTTTCTCTACTCCTTCTTCCTCACCCTGTAGCCCTCTCTCCTACACAGGGCCCCTCtccacctccctccctctctgtctctctttctaccTCTCCCGCCTCGTTGTTCTGTCTcatttgctgctgctgcaggctttttctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctcaattcaattcaatttgctttattggcatgaacaaagaaaacatgttgttgccaaagcagtttacagaaaatgcatatagtacatatcacatattaaatacatacagtaggtgtcacatatatTCTATACAGTGTAataaacatacaacatactacattacaaaacaattacataacaCAATGTAATACTTAACAGTTTTGTACAATCTTATAGTGGTGAGTCCCTCAGGTTGTGGCAGGCAGATACATATTTAGCTGCCAGTGGGGCTGCTGTCCCTTCTCCTAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU156065 True 1778 TUCP 0.50 2 18305149 18354344

Neighbor

gene id symbol gene type direction distance location
loxl5b NA coding upstream 12109 18288083 ~ 18293040 (+)
LOC120568295 nmrk2,LOC106914787,LOC103146068,LOC102216674,LOC106516864,LOC103479788,LOC107094235,LOC102787357 coding upstream 23329 18279102 ~ 18281820 (+)
LOC120568293 LOC103353052,LOC101477959 coding upstream 28146 18265917 ~ 18277003 (+)
LOC120568291 NA coding upstream 40290 18258130 ~ 18264859 (+)
LOC120568290 dnah8 coding upstream 74149 18175983 ~ 18231000 (+)
mfsd14a2 mfsd14a,LOC103353046,LOC100705862,LOC102785602 coding downstream 6538 18360882 ~ 18384971 (+)
insra insr coding downstream 40640 18394984 ~ 18453965 (+)
arhgef18a NA coding downstream 111706 18466050 ~ 18479721 (+)
dapk3 dapk3,LOC102784251 coding downstream 142347 18496691 ~ 18505667 (+)
prkci prkci coding downstream 167625 18521969 ~ 18556360 (+)
G115723 NA non-coding upstream 7640 18296146 ~ 18297509 (+)
G115705 NA non-coding upstream 42488 18262396 ~ 18262661 (+)
G115690 NA non-coding upstream 71091 18233743 ~ 18234058 (+)
LOC120568296 NA non-coding upstream 71443 18232617 ~ 18233706 (+)
G115660 LOC102296215,LOC102788438,LOC100704618 non-coding upstream 131078 18171679 ~ 18174071 (+)
G115733 NA non-coding downstream 24768 18379112 ~ 18385969 (+)
G115781 NA non-coding downstream 99689 18454033 ~ 18455620 (+)
LOC120567854 NA non-coding downstream 103837 18458181 ~ 18465450 (+)
G115793 NA non-coding downstream 134187 18488531 ~ 18490186 (+)
G115826 sec62 non-coding downstream 278372 18632716 ~ 18646383 (+)
LOC120567767 NA other upstream 275254 18027280 ~ 18029895 (+)
LOC120568596 LOC103479750,LOC106948690,LOC102229933,LOC103146349,LOC108232807,LOC105930991,LOC100691642,LOC103353958,LOC107383564 other upstream 821596 17406497 ~ 17483553 (+)
LOC120568363 ankrd12,LOC103396444,LOC102778611 other upstream 1692943 16610376 ~ 16612206 (+)
LOC120568419 LOC102779359 other upstream 1777467 16439025 ~ 16527682 (+)
LOC120568164 LOC104950913,LOC104937610,LOC103355754 other upstream 2076598 16226307 ~ 16228551 (+)
skila skil,LOC102782637 other downstream 212289 18566633 ~ 18602263 (+)
LOC120568691 NA other downstream 306085 18660429 ~ 18674140 (+)
LOC120568911 NA other downstream 366021 18720365 ~ 18725447 (+)
LOC120568770 NA other downstream 662695 19017039 ~ 19052242 (+)
emilin2a NA other downstream 1092667 19447011 ~ 19465381 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
rainbow trout (Oncorhynchus mykiss) G2257821 NA non-coding NC_050571.1 CM025858.1 17666892 ~ 17667095 (-)