G115782


Basic Information

Item Value
gene id G115782
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 18454033 ~ 18456002 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU156134
ATCATTGCACTAAACCTAATACATTAAAGCCTGAACCGTGGCACAGCCATCCAGCGTTATAACCAATTACAGTTGACACCTTCATTACAGCACATGGCATTTAATATTTTTGCAATTTGATAAAATGCTTTTGATTAATGCCAACAGATGTGATAAGTCACTACTATCAGCATATATATTGTCGGACACACACATGGGGAATTGCTGTACATAAACATTTCTAGACTGcattttacttatttttcttCATTGTATTGGTTTCTTTAGTTATAGTTCTTTATCATATTTATAATTATTGCAATTCAGGAAATGTTTACTCAGAATTTAATGTCATTATCATCATCTGTAAAACATCAgaatgtaaaaagtaaaatatcctGTCTCAGTATATATACCTtcataaaatcttaaaaataacCAAATTTTAGGGCCAAAAGTACTTGATCATGTAGTGTTGAATggttttgtaaaaaagaaatatctgCCAAAGgattcttattttatttgtattggcCTCAAAAATCCAATCTCACTCGGGCTCTAGTTTGTATGTAAGTTGAGTTGTGTGTGTACatcatatttactgtatgtctgGCTCTGTCTGAAACAAACTCTTACCTCTCCATACTCTACTCACTGAGATAAAAGCACAACTTCcctttatatacacacatgaTAATCTCAGTACTTACTGAAGAAACAACACTGTTTGGAAAAACAcatgtattaagagaatggaAAATAACAGAAGCACTGCCGGAGCCTCTTCATGAATGCACCTTGCTGCGTTATTTACAGCACTATTTTATTTGATCTTGATATGACGGGCAGACATCTTAAGCTGAAGACGCCAAACACTCCTCCCAGGCATCGCGCTGTTGGTTGACCATGAGTCCAAAAAAGCTAATTAGTATGATTTTCTGGattagaaaaaataaacataagagactaacatgtaaaaacattttctatGACTGGAAATACCTCAAGAATGACAAAATATCAGCTATGtacaaaaacatcaacaatatatttatatatatttttttatcttctaTACCCACTAAAATATACCAAAGAAGCAGCTATTGGTCAATCTGAGGAATTCATTCACCAACGTGTTTTTGAAAACAGTTTAAATATCCTTCAGCTGTAAAtgtgaaaactaaaaaaaaaaaaggaaaagaaagaaacgtaaatacattttaaaatatatcacCCAACAGAAGTCCTGTGTTTATCCTGTGTGCCATTTTGGAATACTGCAAAGTGTGAGGAGGTAAGCCACTTCAACCAGCTTCTCCAATGGATGAGTTTGTTCGAGGATGGACCATCTTTGATTATCCAACAGAGTTCCCAAAGTCTTTCATTTTCAGTTCGTCATCTGCTTGTGTACAAAGACTCAGACATCGTTCCATGACAACTGATGTACAGTAGGCCACAGACAAAATACAAgggcactttttttcaaaactaaGCAACCCAGGGATGAAGCCTCTTGTTGAATTGGGGGAGAGGGACACAGTCTGGACTCAGGAAGGGACAGTGGGTTTAGCAGCCAAAAGTTTGTTTCACAGTTGAATCCATTATCCACCCAGTCTAGCACAAACttggcaatatatatatatatatatatatatatatatatatatacatacatacatacatacatacatacagtatatatatactgtatatacatacagtatataaactacAATCATGAACAAGAGAGACGCTGGAGGTTCGTCcataaatacaaaaaagtgTCTTCTGGCATACATGTGTGGACTTtctgtagtgtgtgtttgtggcatCTGAGAAGAAAAATAAGGTCCTGAGCTATGCACTGAAGGGCTCATGTAGAGAGAGTGTGATAAAAGTGTGATCTAtataaaatgacaacaaaaaacaaaaatatatttaaatctaTAGCAATGACGTGACTGCGTGggatgtgtacagtatgt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU156134 True 1970 lncRNA 0.35 1 18454033 18456002

Neighbor

gene id symbol gene type direction distance location
LOC120569106 NA coding downstream 147416 18300412 ~ 18306617 (-)
LOC120568294 LOC104961359,LOC103353055,LOC100705071,LOC102788160 coding downstream 209775 18236790 ~ 18244258 (-)
LOC120568289 LOC102296215,LOC102788438,LOC102202758,LOC101476248,LOC100704618 coding downstream 278707 18171649 ~ 18175326 (-)
LOC120568287 LOC103353056 coding downstream 283544 18151116 ~ 18170489 (-)
LOC120568865 tpm4,LOC107383605,LOC102218802,LOC103146061,LOC103479776,LOC100703626,LOC102199996,LOC106537044,LOC101474423,LOC102789012,LOC106914771,LOC108232925,LOC106936184 coding downstream 383596 18060695 ~ 18070437 (-)
phc3 NA coding upstream 52453 18508455 ~ 18521023 (-)
gpr160 NA coding upstream 147305 18603307 ~ 18604790 (-)
sec62 sec62,LOC102781860 coding upstream 172972 18628974 ~ 18646415 (-)
samd7 samd7,LOC102781561 coding upstream 191079 18647081 ~ 18655196 (-)
ackr4a LOC103360849 coding upstream 380670 18836672 ~ 18841174 (-)
G115738 NA non-coding downstream 68074 18378400 ~ 18385959 (-)
G115722 NA non-coding downstream 158245 18295562 ~ 18295788 (-)
LOC120568297 LOC101477959,LOC103353052,LOC102786864,LOC103479784 non-coding downstream 167978 18270334 ~ 18286055 (-)
G115710 NA non-coding downstream 193749 18259924 ~ 18260284 (-)
G115691 NA non-coding downstream 219518 18232868 ~ 18234515 (-)
LOC120568822 NA non-coding upstream 78645 18534647 ~ 18535613 (-)
G115848 NA non-coding upstream 158799 18614801 ~ 18615272 (-)
G115851 LOC103353035 non-coding upstream 164831 18620833 ~ 18621220 (-)
LOC120568692 NA non-coding upstream 206839 18662841 ~ 18663776 (-)
G115867 NA non-coding upstream 227604 18683606 ~ 18684244 (-)
LOC120568693 rab8a,LOC103479775,LOC101170877,LOC108232971,LOC106516875,LOC107687930,LOC102219409,LOC104931433,LOC104950312,LOC105022474 other downstream 395874 18052984 ~ 18058159 (-)
ly97.3 NA other downstream 1345129 17039800 ~ 17108904 (-)
G115406 crygn,LOC100699485,LOC103353965,LOC103146339,LOC103479740 other downstream 1408971 17043126 ~ 17045062 (-)
epb41l3b epb41l3,LOC102298622,LOC106534525 other downstream 1642115 16756331 ~ 16811918 (-)
G115312 ralbp1,LOC102778314 other downstream 1814221 16637108 ~ 16639812 (-)
sppl2 sppl2b other upstream 24668 18480670 ~ 18494488 (-)
LOC120568909 LOC103353029,LOC104955147,LOC101484702,LOC102780695 other upstream 247062 18703064 ~ 18720587 (-)
G115941 NA other upstream 388903 18844905 ~ 18846277 (-)
LOC120568972 LOC104949378,LOC103135673,LOC106524506,LOC103479814,LOC106906961,LOC102205181 other upstream 475972 18931974 ~ 18935491 (-)
G116084 LOC104943419,LOC103361571,LOC101479291 other upstream 765789 19221791 ~ 19222726 (-)

Expression


Co-expression Network