skila (skil,LOC102782637)


Basic Information

Item Value
gene id skila
gene name skil,LOC102782637
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 18566633 ~ 18602263 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU156184
GACTTTTGTCGAGTGGGGAGTGAAACGCATGGTTTACTGAGACATGATGCAGGACAAAGGCGAAATAGGAAAATAATACTTTGTTACGCACTTCCCTCTTTTCTGAAATAATGCTTTTTTTGTGGATTTCATCTTGACGGACTGTTTAACGTGTAATGTAATGAGATTTTTCTCTTTCTTAAGGTCCCCCCCAGGGATAAATTGAAAACGAAATATTTGTTTAAGAAAATGCATTTtggaaattgaaaattatttattttttgtgcatgttttgcTGCCCCTTATGTTTTGTGTCACCGGGCCAATCTATCAATCTgctcattgtttaaaaaaaaaagaaaagaaaaaagctacTTCCCCTCACGTAACGCACAAACTATTGAGATGCTCATATGCATGAACATTGAACATGTGCAAGTTCTAGATCATTATTGGTTTAGAGCTTGGCTAAAGTCAGATTATGAAGAacataaaatgtagcctacgTGGTTTGGAAATGTGTGATGTGAGAGAGGaatagaaagtgtgtgtgtgtgtgtgggtggggttatgttttctgattctgatcatTTATGTTTGTCTGGATGTGTAAAAATATGACTTAATTACCCCTTTCACTTTgtgtaatttgcattttataCACAAGGGGGCATTGTTTAGCTTCTTTAATCTTACACCATATTGAAATAAAAAGGACTAAATGTAAACGTAAGGGGAGAAAAATCCCTTGTAACACGATTTGCTGGGCCTTTTGCATTTTGCAGTGTTATGAGAACTTGGATATGCTTTGTACAGAATTTTTACAGGTgtgaacagacaaaaaaaacaaggtgaAATGAGCAGAGCTTCACCATGTGGACAAATTTGAATACATGATTTACATACGCATTGCCTCCAGACTATGTGGAGAATGGTAGTAAGCAAATCCAAGGTGACCTTTGAACTGTTGCAGGTGGTATGCTTTGTCGTTTGGTGTGTCACTTTCAGCCAGTAAATTTTCTATGCCAGTGTGGGAGAAGTAGGAAGTATGGCTGCATTGGTGATTGATCACACAGATCACTGAACACCAAGTTTTAATTTATGCACATCTTGCTATAGATGAAAAAAAGATTCATGGCTTTGCTAAAAAGaaccttttttccccctcaatGCTGTTCTGAAACATGAAACACAGCGTCTGTGTTTGACCATTGCATACTACGTTGCCAATACTACAGTGTGATCAGACTTTTGTTCTTGCATGAATCGAGGCACTGTTCTCCTACCTCATGTTGTGAtatgaaaagatgttttttaagCAGAAGACACTGCATCTCTAACTGTGTATCATCATTGATATTTACTAGTAAATTACATACCTGTAAATGCTTTTAGCTAATACCTCAGTTGTATCAagtgtttgttttcagtttttttgccCTTCCCTGATTTCAGATCTTGTAAATATACTCTGTATAGACAATGAACTTGGATCAAATTCAAGTAAAGTTATGTAGTGTCAAA
>XM_039815518.1
AGCGGATCAGAACATAGAAATCTTCAGTCACCATCATGCATGTGTCTAACTACCAGAAGATTTGTGTCATTTGAAAAGACttaaggagagaaaaagactaCGAATACGAGAACTCAGTCAGCAGACAGAAACAACAATAACCCAGTGCTTAGACATGGCCGGCACCCAGACCAGTTTGAAAACCCCTTTCAAAGACTTCACCTCATTCAAGGGCAACATGAAACGGCTGTATAGAGAGCGACTTGAAGACGCGCCCATTAAGAAGCGAGTGATGGCTGAGATCAACCTGAAGCGTCGCAGCTTGGATTCCCTCCCCAAAACTCCCAAGGTAAAGAGGGAGCAGATCGAGGATCTGTGTCACGACTCTGACATGGATGTGGAGGGCCGGGCTGAACTGCACATGGTGAGCTCTGCTAAAGCCCTGGACCTGAGCCCTgggctcaaacacacactggcccAGTTCACCCTCAGCAGCCAGAGCTCCCTCGGGGGCCCAGCTGCCTTCTCAGCCCGAACCAGCCACGAGCATTCCCCGGCAGGCATGCCCCCCCTGCCCTCCCCTCCTGTTCTGGGAGGGGGCCCTCTGCTGGTTCCCTGTGACAGCTCCACCGAACTCACCCACTCGCTGCTGGAAGGAGAGTCTATCTCCTGCTTCATCGTTGGCGGAGAGAAGCGGCTTTGCCTGCCCCAGGTGCTCAACTCTGTGCTCCGCGACTTCTCGCTGCAGCAGATCAACACTGTGTGCGACGAGCTCTACGTCTACTGCTCGCGTTGTGACGCTGAGCAGCTGCACATCCTCAAGGTGCTGGGCATTCTGCCGTTCAACGCACCTTCCTGTGGCCTCATTACACTGACGGATGCGCAACGGTTGTGCAACGCTCTGCTGCGTCCTGGGGCAGTCTTGCCTGCCGACCCCAGCGGTAAGCTGTCGACCCAGGGCCTGCTGAAGGAGAGTGAAGCCAGTTTCCAGGTGGAGCACCAGTGTTTGGGGAAGTGCCAGGGTCTCTTTGTGCCCCAGTTCTACACCCAGCCTGAGGCGCCCTGCATCCAGTGTGTTGAGTGCCAGTTGCTCTTTTCACCACAGAAGTTTGTCATGCATTCACACAAGTCACCTGATAAGAGGACCTGCCATTGGGGCTTTGACTCAGCCAAGTGGCCCTGCTACCTGCAGCTTGCCAGGAAGTACCAAGGCATGCCTGAGGAGCCAAAGCTCAAGCAGCTCCTGGACGAGGTCAAAGAGAAGTTCCACTACCAGCTCAAGAGGTCGCTAGACAAAAAGGcagtggaggaagaggagagccAGGTGAGGAAACCCTCAGCAAATCTCTGCTCCCCCAGCAGCAAGTTGCCCGATGCCGACCCTGCAAGAAAGgGGAAAGCATCTCAACCCACTCTGGTGTTTAACCGTCTTTTCTCTGACATCAAGGAGGAGCCAGGACACCCCACCCTGGTCCATCCCAGTTACTACCTGTACACATATGATAAGATGGTGGCTCCCAACGTGTCTCTGGGGAGGGAAGCGGAGATGAGCCCCGAGATGTTCGGAGCGCTGCTCAAACACCATTACAACCGCAGAGTGCTGGGCCACGACGAGCCACCCATGGATCTTCATGCGTCGTCTCCCGTTGCTGCTGGCGCCGAGGAGGCCAAATCCCGACGTGCCGCTGCTGCCTCGGCCACTGAGAGGGAATGCCAAGCCCAGGCAGTTTCCATGGAGACAAGCAGCCCGAGCTGCAAGAAAGCCACCCACACTCCCACccacactcctcctcctcctcctcttgcgtCGTTGTTGTCGCCGGCAACGGAAGTGGTGGCTAAGGACACAGGCTCTGCCACGAGCAGCGCTGCAGTAGTGGTGGGGGGGCTGGAGGACGACAAGGACAGGATTGTTGTGGAGATCATGCAGATGTACAGCAGGCAGCAGGAGAAGCTCAACTCCACCCTGCACAAGCAGCTGCAGCTGGAAATGGAGCTGGAGGCGGTGCGCGGGGGCGAGGCGGCGAGGCTACGGGAGCTCAGCGCCGAACAGCGGGAGCTGCGTAGCGAGCTTGAGGCGGTGCACAGCGAGCAGGCGCGGCAGCTCAGCCAGGCCCGCCAGGAACAGCTGGAGCTGGAGACGCGTCTGGAGCAGCTCCGACAGCAGGCCTGCGCCTGCGAGCCAGGGGCACAACTCCAGCAAGAGGCCCACTACACTGCACAGTTGTCGGAGCTACGTCAGAGGCTGGAGCGGGCGGAGGCGGACCGGCAGGAGCTACAGGAGGAGCTGCGCAGGGAGCGTGAGGCGCGGGAAAAGCTGGAGCGCACAATCACCCAGCTCAAGCAGCAGATGGTCCAGTCTGCCACGGTGGGAGGCagcccctctcctcctcttacCCCTTCAACTGGACCTCCTAATGCCCACTCCCCGCAATCCTCCTTCTCAGAGGCCCCAGCGGCTGGCCAAAAGTAACTGCCACCCCCCTCAGGCGCCTCCCTCATTCCTCTCCCCATCACCCGCCAActctacagacacaaacaaatttATTTTGCTCCACTCTCCTCTCTTTAAACAGTATTTAAAGATTTTTGGGCATGTATGTTTGATTTAATTTATAGTTTTTACTGAACAAAGCTGCTTCACAGATGGGAGTTTGGTCAAGTGGAGACCCCCCACATTATCACCCTCCTCTCCCATCTCTTCTTGATCTCTGGATTCTGGAGCTAATGACTTTGAGATTTCAGATTTCCGCTCAGACACACAGACTCGTCACGGACGTCACTTCATGCTACTACCTGGCACAGCAGCCGGTGTCCTCGGACACATAATGGTGCCTGGTTGCAGGCCCCTTCACTCTGTACGTACAGCCCAAATGCTCCAGCCCAAAACGCCCAGTGACTGCAGGAAACTGCATggacatttcaatatttttgctCTCCTTataaaacacagaaagaaaagTGTAACATGTTAAAAACATCAAATCTATATGGAGGAGAAAGACCTttgctgtacaaaaaaaaaaaagacatttttgcaaatgttgaaaaacctcATGAAAATATGCCAATAGTGACTATGAACttgaaaaattgtgtttttagtgTGACCCCTAcaaggtagctagctagcaaatcGTCTGGCCTGGACCCCAGCTGCTCCTCATACCGACTAGTTTCACCCTTCACTCTGCTAGGCAGCACCTGGACTCTCCCGTTGTAAAACTGTCGGTTGATCCACCAGctgcccacacacaaacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacaccgtccaCTGCTGTACGCTAGCGCCATCATTACTCTGTTGGAAAACTCTTTAACACTGTGGTTATCACCCACTTTAGGCTAGACAGGAAACACTGTTCTCTTGGCTTGGCATAAAGACGCTCACAAGCAGTGTTATGCACTTATCACGCTCTCCTCCCCCAGAATCCCTTGGGAAAGGAATGTGTCTGGACACGGGGGCTGGCTGAGCCGGTGTAGCTTTTCTAAGAAAGAAGAAAGGCAGAGTCTctcacatgtgcagtagctgtACTGTGTTACCATAATACATGCAACATCCTCGCATGGCCGCACACACTCCAGTGTGTCAGTGCAGTCCAGGCATTCAGGCAGAACAATGGCCCCAGCGTTCCCAGCAGATGATCAAAGCTTAAGTCTGTCCCTGTTTTCTGGGCTTCTCTTTTTGTATCATTTGACTTCATTGTTAGCAGACGTTATTTATCCACCACTCTGTTTGTCAGAGCGTCATCTAAGAATGTGGGTCGCAGGTGAAAGCAGTTAGTCCAGGGTTGTTTGGGCCTCTGGTCCGGCCCCTGCTTGACGTTGTTCTGCCTGGCTGAACAAACAGCACCaggcaggaagaggaagagaggggaggCGAGGATTGAGGGGAGCGCTCGGGGGGCCTGGTACGCTCTCCCCCTGCGGCAGGCTGGGTGGCCTCGATGCCAGAGGTACAGAGGGAGCCCTTTTTTTGTTCTGTACCATCAGAAtgggggcagctgttgttgtctGTGGGCCTCTGCCCACCCTCGGGTGAGACTGTACAGGATCCCCCCCCATCTCTCAATAAACTCCCTCCCTTGTTCGCAATAACCTCCCTCCCTCGTTATCTCCCACAAAACAAccgtcactcactcacacatacatacccgtccatccatccatctccagTGCCAGATCAGCTCGGGATGTGCTGTGTTTTGTAGATGCCCAGGAGAGCAAGCAGACGTCCagacagaggaagaaaggaCTTCCATTGTGTCAGTTGCCAGGCGAAAGTGCTTTTTATTGCCACTAAGGagatccgtgtgtgtgtgtgtgggtgtgtgggtgtgtgtgtgtgtgtgtgtgagaaaagagaagaggatCGGCCTCAGCTAAACTCTGAGCTTTTTTTATGCATTTGCTATAAATGCAATTTGATAGACATTCCACTGTGGTCCAtcctgttcaatgctgattttCTTACACAGCTTCCCTTATCAATAACAGACCTTAAAAAACCGGGCAGAGTACAGCTGTGGTTTGTTGATTGCCATAAAAGCAGGTGCAAGAAATCAAAAATCAAACCCACACCACCCACCCCCCTGTACACTCTACCGTTTCATTAAAACCTTTATTGAAATTatgaaagaaaatatttaaCGTATTAACTAAAGATTTATATTCACTTTGTAAATACAGTAGTCATTAATATATTAACTGTTCTTGTATGAAAAATATTCTAAAGGTTATATAAATTGGACCAGAACCAAGGCTTCAGatgtttttgctttctttttttttttaaagttattagaACTTGACTTTTGTCGAGTGGGGAGTGAAACGCATGGTTTACTGAGACATGATGCAGGACAAAGGCGAAATAGGAAAATAATACTTTGTTACGCACTTCCCTCTTTTCTGAAATAATGCTTTTTTTGTGGATTTCATCTTGACGGACTGTTTAACGTGTAATGTAATGAGATTTTTCTCTTTCTTAAGGTCCCCCCCAGGGATAAATTGAAAACGAAATATTTGTTTAAGAAAATGCATTTtggaaattgaaaattatttattttttgtgcatgttttgcTGCCCCTTATGTTTTGTGTCACCGGGCCAATCTATCAATCTgctcattgtttaaaaaaaaaagaaaagaaaaaagctacTTCCCCTCACGTAACGCACAAACTATTGAGATGCTCATATGCATGAACATTGAACATGTGCAAGTTCTAGATCATTATTGGTTTAGAGCTTGGCTAAAGTCAGATTATGAAGAacataaaatgtagcctacgTGGTTTGGAAATGTGTGATGTGAGAGAGGaatagaaagtgtgtgtgtgtgtgtgggtggggttatgttttctgattctgatcatTTATGTTTGTCTGGATGTGTAAAAATATGACTTAATTACCCCTTTCACTTTgtgtaatttgcattttataCACAAGGGGGCATTGTTTAGCTTCTTTAATCTTACACCATATTGAAATAAAAAGGACTAAATGTAAACGTAAGGGGAGAAAAATCCCTTGTAACACGATTTGCTGGGCCTTTTGCATTTTGCAGTGTTATGAGAACTTGGATATGCTTTGTACAGAATTTTTACAGGTgtgaacagacaaaaaaaacaaggtgaAATGAGCAGAGCTTCACCATGTGGACAAATTTGAATACATGATTTACATACGCATTGCCTCCAGACTATGTGGAGAATGGTAGTAAGCAAATCCAAGGTGACCTTTGAACTGTTGCAGGTGGTATGCTTTGTCGTTTGGTGTGTCACTTTCAGCCAGTAAATTTTCTATGCCAGTGTGGGAGAAGTAGGAAGTATGGCTGCATTGGTGATTGATCACACAGATCACTGAACACCAAGTTTTAATTTATGCACATCTTGCTATAGATGAAAAAAAGATTCATGGCTTTGCTAAAAAGaaccttttttccccctcaatGCTGTTCTGAAACATGAAACACAGCGTCTGTGTTTGACCATTGCATACTACGTTGCCAATACTACAGTGTGATCAGACTTTTGTTCTTGCATGAATCGAGGCACTGTTCTCCTACCTCATGTTGTGAtatgaaaagatgttttttaagCAGAAGACACTGCATCTCTAACTGTGTATCATCATTGATATTTACTAGTAAATTACATACCTGTAAATGCTTTTAGCTAATACCTCAGTTGTATCAagtgtttgttttcagtttttttgccCTTCCCTGATTTCAGATCTTGTAAATATACTCTGTATAGACAATGAACTTGGATCAAATTCAAGTAAAGTTATGTAGTGTCAAACCA

Function

symbol description
skil Enables several functions, including DNA-binding transcription repressor activity, RNA polymerase II-specific; SMAD binding activity; and identical protein binding activity. Involved in several processes, including negative regulation of transforming growth factor beta receptor signaling pathway; positive regulation of axonogenesis; and skeletal muscle tissue development. Located in PML body and cytoplasm. Part of protein-containing complex.

NR:

description
PREDICTED: ski-like protein

GO: NA

KEGG:

id description
K18499 SKIL; Ski-like protein

RNA

RNA id representative length rna type GC content exon number start site end site
TU156184 False 1503 lncRNA 0.36 1 18600758 18602260
XM_039815518.1 True 6376 mRNA 0.49 7 18566633 18602263

Neighbor

gene id symbol gene type direction distance location
prkci prkci coding upstream 10273 18521969 ~ 18556360 (+)
dapk3 dapk3,LOC102784251 coding upstream 60966 18496691 ~ 18505667 (+)
arhgef18a NA coding upstream 86912 18466050 ~ 18479721 (+)
insra insr coding upstream 112668 18394984 ~ 18453965 (+)
mfsd14a2 mfsd14a,LOC103353046,LOC100705862,LOC102785602 coding upstream 181662 18360882 ~ 18384971 (+)
nadkb LOC103353035,LOC102782138,LOC101483211,LOC102289018 coding downstream 6950 18609213 ~ 18625177 (+)
LOC120568684 NA coding downstream 78337 18680600 ~ 18682419 (+)
LOC120568690 NA coding downstream 97219 18699482 ~ 18701227 (+)
apoda.1 LOC103353029,LOC104955147,LOC101484702,LOC102313692,LOC102209340 coding downstream 114095 18716358 ~ 18718511 (+)
and2 LOC103353068 coding downstream 128465 18730728 ~ 18737190 (+)
G115793 NA non-coding upstream 76447 18488531 ~ 18490186 (+)
LOC120567854 NA non-coding upstream 101183 18458181 ~ 18465450 (+)
G115781 NA non-coding upstream 111013 18454033 ~ 18455620 (+)
G115733 NA non-coding upstream 180664 18379112 ~ 18385969 (+)
G115723 NA non-coding upstream 269124 18296146 ~ 18297509 (+)
G115826 sec62 non-coding downstream 30453 18632716 ~ 18646383 (+)
G115856 samd7 non-coding downstream 46511 18648774 ~ 18649804 (+)
G115862 NA non-coding downstream 81451 18683714 ~ 18684465 (+)
LOC120568663 NA non-coding downstream 87371 18689634 ~ 18692121 (+)
G115863 NA non-coding downstream 90742 18693005 ~ 18694301 (+)
G115729 NA other upstream 212289 18305149 ~ 18354344 (+)
LOC120567767 NA other upstream 536738 18027280 ~ 18029895 (+)
LOC120568596 LOC103479750,LOC106948690,LOC102229933,LOC103146349,LOC108232807,LOC105930991,LOC100691642,LOC103353958,LOC107383564 other upstream 1083080 17406497 ~ 17483553 (+)
LOC120568363 ankrd12,LOC103396444,LOC102778611 other upstream 1954427 16610376 ~ 16612206 (+)
LOC120568419 LOC102779359 other upstream 2038951 16439025 ~ 16527682 (+)
LOC120568691 NA other downstream 58166 18660429 ~ 18674140 (+)
LOC120568911 NA other downstream 118102 18720365 ~ 18725447 (+)
LOC120568770 NA other downstream 414776 19017039 ~ 19052242 (+)
emilin2a NA other downstream 844748 19447011 ~ 19465381 (+)
LOC120567833 gbg5 other downstream 1770964 20373227 ~ 20375633 (+)

Expression


Co-expression Network