G115848


Basic Information

Item Value
gene id G115848
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 18614801 ~ 18615272 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU156215
CTGAAGTTGGGTTGGGAAGAATACAGGCTTTGGGTCCGAAGTGAGTGGCTGGATAAGGTCCATGTAGAAAGTGGGCTCTCCTGTGAGGAGAGCTTTCCGCTGTGTCGCTCGTTGAGCCAGAGGGCTCCAAGTGCTCGTGTTGGCCTGGCAACCTCTGCCGCTCGACTTCCCAGTGCAGCTGTTCATGATCACCCCCCCGTCGCTGCGACCTCGTCCCTTTACGCCGTCTCCTTGGTGACTTGGGTGGGTGCTCTCGGGGTTTGGAGGGCCTGGCTGACTCGGACAGCTCACCGGGGGGCGCTGAGGGTCGCACCATATCCTGCACTCCCAGGGGCTCCGATGACAGACTGGTCTTTGAGTTCTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU156215 True 364 lncRNA 0.60 2 18614801 18615272

Neighbor

gene id symbol gene type direction distance location
gpr160 NA coding downstream 10011 18603307 ~ 18604790 (-)
phc3 NA coding downstream 93778 18508455 ~ 18521023 (-)
LOC120569106 NA coding downstream 308184 18300412 ~ 18306617 (-)
LOC120568294 LOC104961359,LOC103353055,LOC100705071,LOC102788160 coding downstream 370543 18236790 ~ 18244258 (-)
LOC120568289 LOC102296215,LOC102788438,LOC102202758,LOC101476248,LOC100704618 coding downstream 439475 18171649 ~ 18175326 (-)
sec62 sec62,LOC102781860 coding upstream 13702 18628974 ~ 18646415 (-)
samd7 samd7,LOC102781561 coding upstream 31809 18647081 ~ 18655196 (-)
ackr4a LOC103360849 coding upstream 221400 18836672 ~ 18841174 (-)
si:ch211-106h4.6 plxdc2,LOC103360851 coding upstream 303927 18919199 ~ 18930384 (-)
si:ch211-106h4.4 NA coding upstream 322110 18937382 ~ 18961367 (-)
LOC120568822 NA non-coding downstream 79188 18534647 ~ 18535613 (-)
G115782 NA non-coding downstream 158799 18454033 ~ 18456002 (-)
G115738 NA non-coding downstream 228842 18378400 ~ 18385959 (-)
G115722 NA non-coding downstream 319013 18295562 ~ 18295788 (-)
LOC120568297 LOC101477959,LOC103353052,LOC102786864,LOC103479784 non-coding downstream 328746 18270334 ~ 18286055 (-)
G115851 LOC103353035 non-coding upstream 5561 18620833 ~ 18621220 (-)
LOC120568692 NA non-coding upstream 47569 18662841 ~ 18663776 (-)
G115867 NA non-coding upstream 68334 18683606 ~ 18684244 (-)
G115868 NA non-coding upstream 73957 18689229 ~ 18691179 (-)
G115917 NA non-coding upstream 219252 18834524 ~ 18834763 (-)
sppl2 sppl2b other downstream 120313 18480670 ~ 18494488 (-)
LOC120568693 rab8a,LOC103479775,LOC101170877,LOC108232971,LOC106516875,LOC107687930,LOC102219409,LOC104931433,LOC104950312,LOC105022474 other downstream 556642 18052984 ~ 18058159 (-)
ly97.3 NA other downstream 1505897 17039800 ~ 17108904 (-)
G115406 crygn,LOC100699485,LOC103353965,LOC103146339,LOC103479740 other downstream 1569739 17043126 ~ 17045062 (-)
epb41l3b epb41l3,LOC102298622,LOC106534525 other downstream 1802883 16756331 ~ 16811918 (-)
LOC120568909 LOC103353029,LOC104955147,LOC101484702,LOC102780695 other upstream 87792 18703064 ~ 18720587 (-)
G115941 NA other upstream 229633 18844905 ~ 18846277 (-)
LOC120568972 LOC104949378,LOC103135673,LOC106524506,LOC103479814,LOC106906961,LOC102205181 other upstream 316702 18931974 ~ 18935491 (-)
G116084 LOC104943419,LOC103361571,LOC101479291 other upstream 606519 19221791 ~ 19222726 (-)
G116138 NA other upstream 849428 19464700 ~ 19465380 (-)

Expression


Co-expression Network